RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PHACTR3Q96KR7 559 aa20.16■□□□□ 0.82
SCARB1-202ENST00000339570 ATP7AQ04656 1500 aa20.16■□□□□ 0.82
SCARB1-202ENST00000339570 MAP3K4Q9Y6R4 1608 aa20.16■□□□□ 0.82
SCARB1-202ENST00000339570 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
SCARB1-202ENST00000339570 A0A1W2PP64 1363 aa20.15■□□□□ 0.82
SCARB1-202ENST00000339570 CD109Q6YHK3 1445 aa20.15■□□□□ 0.82
SCARB1-202ENST00000339570 HDAC1Q13547 482 aaPredicted RBP20.15■□□□□ 0.82
SCARB1-202ENST00000339570 PLEKHF1Q96S99 279 aa20.15■□□□□ 0.82
SCARB1-202ENST00000339570 FAM83GA6ND36 823 aa20.14■□□□□ 0.82
SCARB1-202ENST00000339570 SMC5Q8IY18 1101 aa20.14■□□□□ 0.82
SCARB1-202ENST00000339570 CHAMP1Q96JM3 812 aa20.14■□□□□ 0.81
SCARB1-202ENST00000339570 MRE11P49959 708 aa20.14■□□□□ 0.81
SCARB1-202ENST00000339570 ERBB4Q15303 1308 aa20.13■□□□□ 0.81
SCARB1-202ENST00000339570 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
SCARB1-202ENST00000339570 NUCB1Q02818 461 aa20.13■□□□□ 0.81
SCARB1-202ENST00000339570 C16orf71Q8IYS4 520 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-202ENST00000339570 FSD2A1L4K1 749 aa20.13■□□□□ 0.81
SCARB1-202ENST00000339570 TBC1D9Q6ZT07 1266 aa20.13■□□□□ 0.81
SCARB1-202ENST00000339570 ARID3AQ99856 593 aa20.13■□□□□ 0.81
SCARB1-202ENST00000339570 ZRANB1Q9UGI0 708 aa20.13■□□□□ 0.81
SCARB1-202ENST00000339570 AAMPQ13685 434 aa20.12■□□□□ 0.81
SCARB1-202ENST00000339570 IDI1Q13907 227 aa20.12■□□□□ 0.81
SCARB1-202ENST00000339570 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
SCARB1-202ENST00000339570 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-202ENST00000339570 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-202ENST00000339570 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-202ENST00000339570 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
SCARB1-202ENST00000339570 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
SCARB1-202ENST00000339570 UBE2Q2Q8WVN8 375 aa20.11■□□□□ 0.81
SCARB1-202ENST00000339570 NUTM2FA1L443 756 aa20.11■□□□□ 0.81
SCARB1-202ENST00000339570 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
SCARB1-202ENST00000339570 GBP4Q96PP9 640 aa20.1■□□□□ 0.81
SCARB1-202ENST00000339570 DDX49Q9Y6V7 483 aaKnown RBP20.1■□□□□ 0.81
SCARB1-202ENST00000339570 KIF16BQ96L93 1317 aa20.1■□□□□ 0.81
SCARB1-202ENST00000339570 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
SCARB1-202ENST00000339570 TERF2IPQ9NYB0 399 aa20.1■□□□□ 0.81
SCARB1-202ENST00000339570 SHPRHQ149N8 1683 aa20.1■□□□□ 0.81
SCARB1-202ENST00000339570 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
SCARB1-202ENST00000339570 ZNF692Q9BU19 519 aaPredicted RBP20.1■□□□□ 0.81
SCARB1-202ENST00000339570 ANKRD36BQ8N2N9 1353 aa20.09■□□□□ 0.81
SCARB1-202ENST00000339570 NPM1P06748 294 aaKnown RBP eCLIP20.09■□□□□ 0.81
SCARB1-202ENST00000339570 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
SCARB1-202ENST00000339570 ESPNB1AK53 854 aa20.09■□□□□ 0.81
SCARB1-202ENST00000339570 SMARCA5O60264 1052 aaPredicted RBP20.09■□□□□ 0.81
SCARB1-202ENST00000339570 MCTP1Q6DN14 999 aa20.09■□□□□ 0.81
SCARB1-202ENST00000339570 MROH2AA6NES4 1674 aa20.08■□□□□ 0.81
SCARB1-202ENST00000339570 TET3O43151 1660 aa20.08■□□□□ 0.81
SCARB1-202ENST00000339570 VIRMAQ69YN4 1812 aaKnown RBP20.08■□□□□ 0.81
SCARB1-202ENST00000339570 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.8
SCARB1-202ENST00000339570 HDGFL2Q7Z4V5 671 aaPredicted RBP20.08■□□□□ 0.8
SCARB1-202ENST00000339570 NPATQ14207 1427 aa20.07■□□□□ 0.8
SCARB1-202ENST00000339570 OTUD7AQ8TE49 926 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-202ENST00000339570 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
SCARB1-202ENST00000339570 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
SCARB1-202ENST00000339570 NCKAP5LQ9HCH0 1330 aa20.06■□□□□ 0.8
SCARB1-202ENST00000339570 KIF1BO60333 1816 aa20.06■□□□□ 0.8
SCARB1-202ENST00000339570 PKP1Q13835 747 aa20.05■□□□□ 0.8
SCARB1-202ENST00000339570 FBXO31Q5XUX0 539 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-202ENST00000339570 K7ELQ4 463 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-202ENST00000339570 SIRT2Q8IXJ6 389 aa20.05■□□□□ 0.8
SCARB1-202ENST00000339570 MYOM2P54296 1465 aa20.04■□□□□ 0.8
SCARB1-202ENST00000339570 C8orf58Q8NAV2 365 aa20.04■□□□□ 0.8
SCARB1-202ENST00000339570 ZBTB7BO15156 539 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-202ENST00000339570 HSP90AA2PQ14568 343 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-202ENST00000339570 CAVIN1Q6NZI2 390 aaKnown RBP20.04■□□□□ 0.8
SCARB1-202ENST00000339570 KIF2CQ99661 725 aa20.04■□□□□ 0.8
SCARB1-202ENST00000339570 CLCN1P35523 988 aa20.03■□□□□ 0.8
SCARB1-202ENST00000339570 MLECQ14165 292 aa20.03■□□□□ 0.8
SCARB1-202ENST00000339570 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-202ENST00000339570 MBIPQ9NS73 344 aa20.03■□□□□ 0.8
SCARB1-202ENST00000339570 QRICH2Q9H0J4 1663 aa20.03■□□□□ 0.8
SCARB1-202ENST00000339570 SHROOM2Q13796 1616 aa20.03■□□□□ 0.8
SCARB1-202ENST00000339570 SBNO2Q9Y2G9 1366 aa20.02■□□□□ 0.8
SCARB1-202ENST00000339570 RBM25P49756 843 aaKnown RBP20.02■□□□□ 0.8
SCARB1-202ENST00000339570 TSHZ3Q63HK5 1081 aa20.02■□□□□ 0.8
SCARB1-202ENST00000339570 MPNDQ8N594 471 aa20.02■□□□□ 0.8
SCARB1-202ENST00000339570 VAMP4O75379 141 aa20.02■□□□□ 0.79
SCARB1-202ENST00000339570 AK9Q5TCS8 1911 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 GOLGA6L22H0YM25 854 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 NME9Q86XW9 330 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 BMP2KLQ5H9B9 411 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 MIS18AQ9NYP9 233 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 PPIP5K1Q6PFW1 1433 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 RAB3GAP1Q15042 981 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 SLC4A10Q6U841 1118 aa20.01■□□□□ 0.79
SCARB1-202ENST00000339570 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
SCARB1-202ENST00000339570 NASPP49321 788 aaPredicted RBP20■□□□□ 0.79
SCARB1-202ENST00000339570 RBM27Q9P2N5 1060 aaKnown RBP20■□□□□ 0.79
SCARB1-202ENST00000339570 POLKQ9UBT6 870 aa20■□□□□ 0.79
SCARB1-202ENST00000339570 PPRC1Q5VV67 1664 aaKnown RBP19.99■□□□□ 0.79
SCARB1-202ENST00000339570 MRPL50Q8N5N7 158 aaKnown RBP19.99■□□□□ 0.79
SCARB1-202ENST00000339570 ANP32BQ92688 251 aaKnown RBP19.99■□□□□ 0.79
SCARB1-202ENST00000339570 GSPT1P15170 499 aaKnown RBP19.99■□□□□ 0.79
SCARB1-202ENST00000339570 ZGPATQ8N5A5 531 aaKnown RBP19.98■□□□□ 0.79
SCARB1-202ENST00000339570 NECTIN2Q92692 538 aa19.98■□□□□ 0.79
SCARB1-202ENST00000339570 TULP4Q9NRJ4 1543 aa19.98■□□□□ 0.79
SCARB1-202ENST00000339570 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
SCARB1-202ENST00000339570 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
SCARB1-202ENST00000339570 CDC45O75419 566 aa19.97■□□□□ 0.79
SCARB1-202ENST00000339570 RBM10P98175 930 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms