RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 NEUROD6Q96NK8 337 aa19.53■□□□□ 0.72
CCNY-202ENST00000339497 FANCAO15360 1455 aa19.53■□□□□ 0.72
CCNY-202ENST00000339497 PLEKHO1Q53GL0 409 aaPredicted RBP19.53■□□□□ 0.72
CCNY-202ENST00000339497 NME9Q86XW9 330 aa19.53■□□□□ 0.72
CCNY-202ENST00000339497 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
CCNY-202ENST00000339497 NOS1P29475 1434 aa19.53■□□□□ 0.72
CCNY-202ENST00000339497 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
CCNY-202ENST00000339497 VPS37CA5D8V6 355 aaPredicted RBP19.52■□□□□ 0.72
CCNY-202ENST00000339497 GNAI2P04899 355 aa19.52■□□□□ 0.72
CCNY-202ENST00000339497 NUCB2P80303 420 aa19.52■□□□□ 0.72
CCNY-202ENST00000339497 DUSP27Q5VZP5 1158 aa19.52■□□□□ 0.72
CCNY-202ENST00000339497 EMILIN1Q9Y6C2 1016 aa19.51■□□□□ 0.71
CCNY-202ENST00000339497 MIS18AQ9NYP9 233 aa19.51■□□□□ 0.71
CCNY-202ENST00000339497 SCAF11Q99590 1463 aaKnown RBP19.5■□□□□ 0.71
CCNY-202ENST00000339497 NINLQ9Y2I6 1382 aa19.5■□□□□ 0.71
CCNY-202ENST00000339497 RAPGEF6Q8TEU7 1601 aa19.5■□□□□ 0.71
CCNY-202ENST00000339497 APPP05067 770 aa19.5■□□□□ 0.71
CCNY-202ENST00000339497 RNF20Q5VTR2 975 aa19.5■□□□□ 0.71
CCNY-202ENST00000339497 ZNF530Q6P9A1 599 aaPredicted RBP19.5■□□□□ 0.71
CCNY-202ENST00000339497 NEK4P51957 841 aa19.5■□□□□ 0.71
CCNY-202ENST00000339497 XPCQ01831 940 aaPredicted RBP19.5■□□□□ 0.71
CCNY-202ENST00000339497 DHX29Q7Z478 1369 aaKnown RBP19.49■□□□□ 0.71
CCNY-202ENST00000339497 C14orf93Q9H972 538 aaKnown RBP19.49■□□□□ 0.71
CCNY-202ENST00000339497 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
CCNY-202ENST00000339497 CHD1LQ86WJ1 897 aa19.48■□□□□ 0.71
CCNY-202ENST00000339497 MCM10Q7L590 875 aa19.48■□□□□ 0.71
CCNY-202ENST00000339497 AMER1Q5JTC6 1135 aaPredicted RBP19.48■□□□□ 0.71
CCNY-202ENST00000339497 LRRFIP1Q32MZ4 808 aaKnown RBP19.47■□□□□ 0.71
CCNY-202ENST00000339497 TPM4P67936 248 aa19.47■□□□□ 0.71
CCNY-202ENST00000339497 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
CCNY-202ENST00000339497 CCDC34Q96HJ3 373 aa19.46■□□□□ 0.71
CCNY-202ENST00000339497 CCT4P50991 539 aaKnown RBP19.45■□□□□ 0.7
CCNY-202ENST00000339497 ANKLE2Q86XL3 938 aa19.45■□□□□ 0.7
CCNY-202ENST00000339497 FBLN1P23142 703 aa19.45■□□□□ 0.7
CCNY-202ENST00000339497 TMX4Q9H1E5 349 aaPredicted RBP19.45■□□□□ 0.7
CCNY-202ENST00000339497 CEBPAP49715 358 aaPredicted RBP19.44■□□□□ 0.7
CCNY-202ENST00000339497 CREBRFQ8IUR6 639 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 FSD1Q9BTV5 496 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.44■□□□□ 0.7
CCNY-202ENST00000339497 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 CPLX1O14810 134 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 TRAK2O60296 914 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 SRCIN1Q9C0H9 1055 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 FAM135AQ9P2D6 1515 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 MSH5O43196 834 aa19.44■□□□□ 0.7
CCNY-202ENST00000339497 NKTRP30414 1462 aaKnown RBP19.43■□□□□ 0.7
CCNY-202ENST00000339497 FOSBP53539 338 aa19.43■□□□□ 0.7
CCNY-202ENST00000339497 CPLX2Q6PUV4 134 aaKnown RBP19.43■□□□□ 0.7
CCNY-202ENST00000339497 PLCH2O75038 1416 aa19.42■□□□□ 0.7
CCNY-202ENST00000339497 G3V3G9 751 aa19.42■□□□□ 0.7
CCNY-202ENST00000339497 WASLO00401 505 aaPredicted RBP19.42■□□□□ 0.7
CCNY-202ENST00000339497 DCAF8Q5TAQ9 597 aa19.42■□□□□ 0.7
CCNY-202ENST00000339497 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
CCNY-202ENST00000339497 BECN2A8MW95 431 aa19.42■□□□□ 0.7
CCNY-202ENST00000339497 BICD2Q8TD16 824 aa19.42■□□□□ 0.7
CCNY-202ENST00000339497 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
CCNY-202ENST00000339497 LRRCC1Q9C099 1032 aa19.41■□□□□ 0.7
CCNY-202ENST00000339497 TATP17735 454 aaPredicted RBP19.41■□□□□ 0.7
CCNY-202ENST00000339497 RABEP1Q15276 862 aa19.41■□□□□ 0.7
CCNY-202ENST00000339497 WASHC4Q2M389 1173 aa19.41■□□□□ 0.7
CCNY-202ENST00000339497 RALGAPBQ86X10 1494 aa19.41■□□□□ 0.7
CCNY-202ENST00000339497 TESK2Q96S53 571 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 SYCP2Q9BX26 1530 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 GOLGA6L19H0YKK7 550 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
CCNY-202ENST00000339497 TRDNQ13061 729 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 TCOF1Q13428 1488 aaKnown RBP19.4■□□□□ 0.7
CCNY-202ENST00000339497 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 IL1RAPL2Q9NP60 686 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 KDM5BQ9UGL1 1544 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 CHMP4CQ96CF2 233 aa19.4■□□□□ 0.7
CCNY-202ENST00000339497 SIL1Q9H173 461 aa19.39■□□□□ 0.7
CCNY-202ENST00000339497 PRAG1Q86YV5 1406 aa19.39■□□□□ 0.69
CCNY-202ENST00000339497 AKAP17AQ02040 695 aaKnown RBP19.39■□□□□ 0.69
CCNY-202ENST00000339497 EXOC6BQ9Y2D4 811 aa19.39■□□□□ 0.69
CCNY-202ENST00000339497 CTTNBP2Q8WZ74 1663 aa19.39■□□□□ 0.69
CCNY-202ENST00000339497 DENND4BO75064 1496 aaPredicted RBP19.39■□□□□ 0.69
CCNY-202ENST00000339497 TRAPPC8Q9Y2L5 1435 aa19.38■□□□□ 0.69
CCNY-202ENST00000339497 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
CCNY-202ENST00000339497 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
CCNY-202ENST00000339497 MAP4K4O95819 1239 aaPredicted RBP19.38■□□□□ 0.69
CCNY-202ENST00000339497 DNAJC2Q99543 621 aaKnown RBP19.38■□□□□ 0.69
CCNY-202ENST00000339497 TRIM27P14373 513 aa19.38■□□□□ 0.69
CCNY-202ENST00000339497 MYL6BP14649 208 aa19.38■□□□□ 0.69
CCNY-202ENST00000339497 FAM177BA6PVY3 158 aa19.38■□□□□ 0.69
CCNY-202ENST00000339497 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
CCNY-202ENST00000339497 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
CCNY-202ENST00000339497 VPS37DQ86XT2 251 aa19.37■□□□□ 0.69
CCNY-202ENST00000339497 WDR62O43379 1518 aa19.37■□□□□ 0.69
CCNY-202ENST00000339497 RNF214Q8ND24 703 aa19.36■□□□□ 0.69
CCNY-202ENST00000339497 CLSTN1O94985 981 aa19.36■□□□□ 0.69
CCNY-202ENST00000339497 DDX54Q8TDD1 881 aaKnown RBP19.36■□□□□ 0.69
CCNY-202ENST00000339497 USHBP1Q8N6Y0 703 aa19.36■□□□□ 0.69
CCNY-202ENST00000339497 IFT57Q9NWB7 429 aa19.36■□□□□ 0.69
CCNY-202ENST00000339497 GNAT3A8MTJ3 354 aa19.36■□□□□ 0.69
CCNY-202ENST00000339497 CCDC27Q2M243 656 aa19.36■□□□□ 0.69
CCNY-202ENST00000339497 CAVIN1Q6NZI2 390 aaKnown RBP19.36■□□□□ 0.69
CCNY-202ENST00000339497 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
CCNY-202ENST00000339497 KIAA0556O60303 1618 aa19.35■□□□□ 0.69
CCNY-202ENST00000339497 ABCC11Q96J66 1382 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms