RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NOP2P46087 812 aaKnown RBP11.81□□□□□ -0.52
PTCHD4-201ENST00000339488 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
PTCHD4-201ENST00000339488 YY1AP1Q9H869 796 aa11.8□□□□□ -0.52
PTCHD4-201ENST00000339488 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
PTCHD4-201ENST00000339488 SART3Q15020 963 aaKnown RBP11.8□□□□□ -0.52
PTCHD4-201ENST00000339488 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTCHD4-201ENST00000339488 DNAJC21Q5F1R6 531 aaKnown RBP11.8□□□□□ -0.52
PTCHD4-201ENST00000339488 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
PTCHD4-201ENST00000339488 PYCARDQ9ULZ3 195 aa11.8□□□□□ -0.52
PTCHD4-201ENST00000339488 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
PTCHD4-201ENST00000339488 PTMSP20962 102 aa11.79□□□□□ -0.52
PTCHD4-201ENST00000339488 NEK11Q8NG66 645 aa11.79□□□□□ -0.52
PTCHD4-201ENST00000339488 ZNF622Q969S3 477 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTCHD4-201ENST00000339488 FHOD3Q2V2M9 1422 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 RLBP1P12271 317 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 KIF18AQ8NI77 898 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 LCMT1Q9UIC8 334 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 NINLQ9Y2I6 1382 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 ZNF526Q8TF50 670 aaPredicted RBP11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 ERCC6L2Q5T890 1561 aa11.78□□□□□ -0.52
PTCHD4-201ENST00000339488 CHAF1AQ13111 956 aaPredicted RBP11.77□□□□□ -0.52
PTCHD4-201ENST00000339488 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.52
PTCHD4-201ENST00000339488 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.52
PTCHD4-201ENST00000339488 DRC1Q96MC2 740 aa11.77□□□□□ -0.52
PTCHD4-201ENST00000339488 KRT222Q8N1A0 295 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 CARD11Q9BXL7 1154 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 PARD3Q8TEW0 1356 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 SAMD9Q5K651 1589 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
PTCHD4-201ENST00000339488 K7ELQ4 463 aaPredicted RBP11.76□□□□□ -0.53
PTCHD4-201ENST00000339488 MYCBPQ99417 103 aaPredicted RBP11.76□□□□□ -0.53
PTCHD4-201ENST00000339488 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
PTCHD4-201ENST00000339488 CTIFO43310 598 aaKnown RBP11.76□□□□□ -0.53
PTCHD4-201ENST00000339488 SYT10Q6XYQ8 523 aa11.76□□□□□ -0.53
PTCHD4-201ENST00000339488 MORC2Q9Y6X9 1032 aaPredicted RBP11.76□□□□□ -0.53
PTCHD4-201ENST00000339488 DISP1Q96F81 1524 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 NPHP1O15259 732 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 KIF2CQ99661 725 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 RASSF4Q9H2L5 321 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 AXDND1Q5T1B0 1012 aaPredicted RBP11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 SNX21Q969T3 373 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 TSPYL1Q9H0U9 437 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 DIAPH3Q9NSV4 1193 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 SMC4Q9NTJ3 1288 aa11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
PTCHD4-201ENST00000339488 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
PTCHD4-201ENST00000339488 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
PTCHD4-201ENST00000339488 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
PTCHD4-201ENST00000339488 IRF6O14896 467 aa11.74□□□□□ -0.53
PTCHD4-201ENST00000339488 ADCY5O95622 1261 aa11.74□□□□□ -0.53
PTCHD4-201ENST00000339488 C16orf45Q96MC5 204 aaPredicted RBP11.74□□□□□ -0.53
PTCHD4-201ENST00000339488 SPTLC3Q9NUV7 552 aa11.74□□□□□ -0.53
PTCHD4-201ENST00000339488 E2F4Q16254 413 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 ICE2Q659A1 982 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 KMT5BQ4FZB7 885 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 EGFL6Q8IUX8 553 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 NCAPGQ9BPX3 1015 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 KCNF1Q9H3M0 494 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 POLKQ9UBT6 870 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 KIAA0556O60303 1618 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 BRPF1P55201 1214 aaPredicted RBP11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 PMFBP1Q8TBY8 1022 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 TSPY26PQ9H489 355 aa11.73□□□□□ -0.53
PTCHD4-201ENST00000339488 CFAP43Q8NDM7 1665 aa11.72□□□□□ -0.53
PTCHD4-201ENST00000339488 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
PTCHD4-201ENST00000339488 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
PTCHD4-201ENST00000339488 SHROOM2Q13796 1616 aa11.72□□□□□ -0.53
PTCHD4-201ENST00000339488 HECW1Q76N89 1606 aa11.72□□□□□ -0.53
PTCHD4-201ENST00000339488 ZNF521Q96K83 1311 aa11.71□□□□□ -0.53
PTCHD4-201ENST00000339488 APAF1O14727 1248 aa11.71□□□□□ -0.53
PTCHD4-201ENST00000339488 CYP2C19P33261 490 aa11.71□□□□□ -0.53
PTCHD4-201ENST00000339488 CEP83Q9Y592 693 aa11.71□□□□□ -0.53
PTCHD4-201ENST00000339488 ZNF592Q92610 1267 aa11.71□□□□□ -0.54
PTCHD4-201ENST00000339488 NOL10Q9BSC4 688 aaKnown RBP11.71□□□□□ -0.54
PTCHD4-201ENST00000339488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.54
PTCHD4-201ENST00000339488 KDM5CP41229 1560 aa11.7□□□□□ -0.54
PTCHD4-201ENST00000339488 MYO1CO00159 1063 aa11.7□□□□□ -0.54
PTCHD4-201ENST00000339488 POLR3GO15318 223 aaPredicted RBP11.7□□□□□ -0.54
PTCHD4-201ENST00000339488 RBM6P78332 1123 aaKnown RBP11.7□□□□□ -0.54
PTCHD4-201ENST00000339488 TSGA10IPQ3SY00 556 aa11.7□□□□□ -0.54
PTCHD4-201ENST00000339488 KRBA2Q6ZNG9 492 aa11.7□□□□□ -0.54
PTCHD4-201ENST00000339488 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
PTCHD4-201ENST00000339488 RGL3Q3MIN7 710 aa11.69□□□□□ -0.54
PTCHD4-201ENST00000339488 PLEKHH2Q8IVE3 1493 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms