RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 PAK3O75914 559 aaPredicted RBP23.27■■□□□ 1.32
SFN-201ENST00000339276 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
SFN-201ENST00000339276 KIF7Q2M1P5 1343 aa23.25■■□□□ 1.31
SFN-201ENST00000339276 LMOD2Q6P5Q4 547 aa23.25■■□□□ 1.31
SFN-201ENST00000339276 HDGFL2Q7Z4V5 671 aaPredicted RBP23.25■■□□□ 1.31
SFN-201ENST00000339276 ZNF692Q9BU19 519 aaPredicted RBP23.25■■□□□ 1.31
SFN-201ENST00000339276 TERF2IPQ9NYB0 399 aa23.25■■□□□ 1.31
SFN-201ENST00000339276 ARHGEF10O15013 1369 aa23.24■■□□□ 1.31
SFN-201ENST00000339276 ANKRD36BQ8N2N9 1353 aa23.24■■□□□ 1.31
SFN-201ENST00000339276 BRD4O60885 1362 aaPredicted RBP23.23■■□□□ 1.31
SFN-201ENST00000339276 LRP6O75581 1613 aa23.22■■□□□ 1.31
SFN-201ENST00000339276 ABCA3Q99758 1704 aa23.21■■□□□ 1.31
SFN-201ENST00000339276 SPATA31A6Q5VVP1 1343 aa23.21■■□□□ 1.31
SFN-201ENST00000339276 PIK3C2AO00443 1686 aa23.21■■□□□ 1.31
SFN-201ENST00000339276 TTC21BQ7Z4L5 1316 aa23.2■■□□□ 1.31
SFN-201ENST00000339276 CCDC7Q96M83 1385 aa23.2■■□□□ 1.3
SFN-201ENST00000339276 MED1Q15648 1581 aaPredicted RBP23.2■■□□□ 1.3
SFN-201ENST00000339276 WASHC2AQ641Q2 1341 aa23.2■■□□□ 1.3
SFN-201ENST00000339276 EDC4Q6P2E9 1401 aaKnown RBP23.19■■□□□ 1.3
SFN-201ENST00000339276 CRYBG1Q9Y4K1 1723 aa23.19■■□□□ 1.3
SFN-201ENST00000339276 NUTM2BA6NNL0 878 aaPredicted RBP23.19■■□□□ 1.3
SFN-201ENST00000339276 NUTM2EB1AL46 878 aaPredicted RBP23.19■■□□□ 1.3
SFN-201ENST00000339276 PLEKHG5O94827 1062 aa23.19■■□□□ 1.3
SFN-201ENST00000339276 NUTM2AQ8IVF1 878 aaPredicted RBP23.19■■□□□ 1.3
SFN-201ENST00000339276 NUTM2GQ5VZR2 741 aa23.18■■□□□ 1.3
SFN-201ENST00000339276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
SFN-201ENST00000339276 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
SFN-201ENST00000339276 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
SFN-201ENST00000339276 TTC21AQ8NDW8 1320 aa23.16■■□□□ 1.3
SFN-201ENST00000339276 PHRF1Q9P1Y6 1649 aaKnown RBP23.16■■□□□ 1.3
SFN-201ENST00000339276 MARF1Q9Y4F3 1742 aaKnown RBP23.15■■□□□ 1.3
SFN-201ENST00000339276 CARD14Q9BXL6 1004 aa23.13■■□□□ 1.29
SFN-201ENST00000339276 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
SFN-201ENST00000339276 NME9Q86XW9 330 aa23.12■■□□□ 1.29
SFN-201ENST00000339276 NLRP6P59044 892 aa23.11■■□□□ 1.29
SFN-201ENST00000339276 PANK3Q9H999 370 aa23.11■■□□□ 1.29
SFN-201ENST00000339276 USP19O94966 1318 aa23.11■■□□□ 1.29
SFN-201ENST00000339276 USP54Q70EL1 1684 aa23.11■■□□□ 1.29
SFN-201ENST00000339276 ADAMTS2O95450 1211 aa23.1■■□□□ 1.29
SFN-201ENST00000339276 HAP1P54257 671 aaPredicted RBP23.1■■□□□ 1.29
SFN-201ENST00000339276 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
SFN-201ENST00000339276 ZRANB1Q9UGI0 708 aa23.1■■□□□ 1.29
SFN-201ENST00000339276 KIF20BQ96Q89 1820 aa23.1■■□□□ 1.29
SFN-201ENST00000339276 SLIT3O75094 1523 aa23.09■■□□□ 1.29
SFN-201ENST00000339276 MEX3CQ5U5Q3 659 aaKnown RBP23.08■■□□□ 1.29
SFN-201ENST00000339276 USP31Q70CQ4 1352 aa23.07■■□□□ 1.28
SFN-201ENST00000339276 OVOS2A0A0J9YW53 1432 aa23.07■■□□□ 1.28
SFN-201ENST00000339276 OVOS2Q6IE36 1432 aa23.07■■□□□ 1.28
SFN-201ENST00000339276 FYB1O15117 783 aa23.04■■□□□ 1.28
SFN-201ENST00000339276 C8orf37Q96NL8 207 aa23.04■■□□□ 1.28
SFN-201ENST00000339276 GCP02774 474 aa23.03■■□□□ 1.28
SFN-201ENST00000339276 GGNBP2Q9H3C7 697 aa23.03■■□□□ 1.28
SFN-201ENST00000339276 NFAT5O94916 1531 aa23.02■■□□□ 1.28
SFN-201ENST00000339276 CGNL1Q0VF96 1302 aa23.01■■□□□ 1.27
SFN-201ENST00000339276 SOX12O15370 315 aa23.01■■□□□ 1.27
SFN-201ENST00000339276 PLCH1Q4KWH8 1693 aa23.01■■□□□ 1.27
SFN-201ENST00000339276 KIAA0232Q92628 1395 aa23■■□□□ 1.27
SFN-201ENST00000339276 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
SFN-201ENST00000339276 COG3Q96JB2 828 aa23■■□□□ 1.27
SFN-201ENST00000339276 NGLY1Q96IV0 654 aa22.99■■□□□ 1.27
SFN-201ENST00000339276 ANKRD26Q9UPS8 1709 aa22.99■■□□□ 1.27
SFN-201ENST00000339276 COL14A1Q05707 1796 aaKnown RBP22.98■■□□□ 1.27
SFN-201ENST00000339276 KCNH5Q8NCM2 988 aa22.98■■□□□ 1.27
SFN-201ENST00000339276 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
SFN-201ENST00000339276 CPDO75976 1380 aa22.98■■□□□ 1.27
SFN-201ENST00000339276 AFF2P51816 1311 aa22.97■■□□□ 1.27
SFN-201ENST00000339276 FAM83GA6ND36 823 aa22.97■■□□□ 1.27
SFN-201ENST00000339276 PRDM11Q9NQV5 511 aa22.97■■□□□ 1.27
SFN-201ENST00000339276 KNSTRNQ9Y448 316 aa22.97■■□□□ 1.27
SFN-201ENST00000339276 PER1O15534 1290 aaPredicted RBP22.96■■□□□ 1.27
SFN-201ENST00000339276 SLIT2O94813 1529 aa22.95■■□□□ 1.26
SFN-201ENST00000339276 CHRNA2Q15822 529 aa22.95■■□□□ 1.26
SFN-201ENST00000339276 LTN1O94822 1766 aa22.94■■□□□ 1.26
SFN-201ENST00000339276 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
SFN-201ENST00000339276 RGS17Q9UGC6 210 aaPredicted RBP22.94■■□□□ 1.26
SFN-201ENST00000339276 NWD2Q9ULI1 1742 aa22.94■■□□□ 1.26
SFN-201ENST00000339276 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
SFN-201ENST00000339276 NSD2O96028 1365 aa22.93■■□□□ 1.26
SFN-201ENST00000339276 FNBP4Q8N3X1 1017 aaPredicted RBP22.93■■□□□ 1.26
SFN-201ENST00000339276 NRAPQ86VF7 1730 aa22.92■■□□□ 1.26
SFN-201ENST00000339276 ZNF316A6NFI3 1004 aaPredicted RBP22.92■■□□□ 1.26
SFN-201ENST00000339276 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
SFN-201ENST00000339276 BCL9LQ86UU0 1499 aa22.92■■□□□ 1.26
SFN-201ENST00000339276 COL18A1P39060 1754 aa22.91■■□□□ 1.26
SFN-201ENST00000339276 FBLN1P23142 703 aa22.91■■□□□ 1.26
SFN-201ENST00000339276 ARHGEF25Q86VW2 580 aa22.91■■□□□ 1.26
SFN-201ENST00000339276 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.91■■□□□ 1.26
SFN-201ENST00000339276 USP21Q9UK80 565 aa22.9■■□□□ 1.26
SFN-201ENST00000339276 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.26
SFN-201ENST00000339276 BTG4Q9NY30 223 aa22.89■■□□□ 1.26
SFN-201ENST00000339276 CAMTA1Q9Y6Y1 1673 aa22.89■■□□□ 1.25
SFN-201ENST00000339276 AATKQ6ZMQ8 1374 aa22.89■■□□□ 1.25
SFN-201ENST00000339276 ZNF772Q68DY9 489 aaPredicted RBP22.88■■□□□ 1.25
SFN-201ENST00000339276 RGPD5Q99666 1765 aa22.87■■□□□ 1.25
SFN-201ENST00000339276 CC2D1BQ5T0F9 858 aaKnown RBP22.86■■□□□ 1.25
SFN-201ENST00000339276 UNC5CLQ8IV45 518 aa22.86■■□□□ 1.25
SFN-201ENST00000339276 MAP3K19Q56UN5 1328 aa22.86■■□□□ 1.25
SFN-201ENST00000339276 ABCC6O95255 1503 aa22.86■■□□□ 1.25
SFN-201ENST00000339276 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
SFN-201ENST00000339276 CNGB1Q14028 1251 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms