RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 RGS12O14924 1447 aa14.42□□□□□ -0.1
RTN3-201ENST00000338850 DLC1Q96QB1 1528 aa14.42□□□□□ -0.1
RTN3-201ENST00000338850 FNBP4Q8N3X1 1017 aaPredicted RBP14.42□□□□□ -0.1
RTN3-201ENST00000338850 TMC1Q8TDI8 760 aa14.42□□□□□ -0.1
RTN3-201ENST00000338850 PRAM1Q96QH2 718 aa14.42□□□□□ -0.1
RTN3-201ENST00000338850 NPC1L1Q9UHC9 1359 aa14.42□□□□□ -0.1
RTN3-201ENST00000338850 ADGRB1O14514 1584 aa14.42□□□□□ -0.1
RTN3-201ENST00000338850 MYOM1P52179 1685 aa14.42□□□□□ -0.1
RTN3-201ENST00000338850 PER1O15534 1290 aaPredicted RBP14.41□□□□□ -0.1
RTN3-201ENST00000338850 TESK2Q96S53 571 aa14.41□□□□□ -0.1
RTN3-201ENST00000338850 KIF1AQ12756 1690 aa14.41□□□□□ -0.1
RTN3-201ENST00000338850 USP21Q9UK80 565 aa14.4□□□□□ -0.1
RTN3-201ENST00000338850 SPATA31A3Q5VYP0 1347 aa14.4□□□□□ -0.1
RTN3-201ENST00000338850 SLC24A1O60721 1099 aa14.39□□□□□ -0.11
RTN3-201ENST00000338850 SAFB2Q14151 953 aaKnown RBP eCLIP14.39□□□□□ -0.11
RTN3-201ENST00000338850 KRT28Q7Z3Y7 464 aa14.38□□□□□ -0.11
RTN3-201ENST00000338850 POGKQ9P215 609 aa14.38□□□□□ -0.11
RTN3-201ENST00000338850 TRPC5Q9UL62 973 aaPredicted RBP14.38□□□□□ -0.11
RTN3-201ENST00000338850 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
RTN3-201ENST00000338850 KDM2AQ9Y2K7 1162 aa14.38□□□□□ -0.11
RTN3-201ENST00000338850 ATRNO75882 1429 aa14.38□□□□□ -0.11
RTN3-201ENST00000338850 TRAK1Q9UPV9 953 aa14.37□□□□□ -0.11
RTN3-201ENST00000338850 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
RTN3-201ENST00000338850 BCL9LQ86UU0 1499 aa14.37□□□□□ -0.11
RTN3-201ENST00000338850 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
RTN3-201ENST00000338850 TMF1P82094 1093 aa14.36□□□□□ -0.11
RTN3-201ENST00000338850 EIF3AQ14152 1382 aaKnown RBP14.35□□□□□ -0.11
RTN3-201ENST00000338850 TNS3Q68CZ2 1445 aa14.35□□□□□ -0.11
RTN3-201ENST00000338850 CDCA8Q53HL2 280 aa14.35□□□□□ -0.11
RTN3-201ENST00000338850 USP32Q8NFA0 1604 aa14.34□□□□□ -0.11
RTN3-201ENST00000338850 PSME1Q06323 249 aa14.34□□□□□ -0.11
RTN3-201ENST00000338850 MARF1Q9Y4F3 1742 aaKnown RBP14.34□□□□□ -0.11
RTN3-201ENST00000338850 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
RTN3-201ENST00000338850 SBNO1A3KN83 1393 aa14.34□□□□□ -0.11
RTN3-201ENST00000338850 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
RTN3-201ENST00000338850 MINK1Q8N4C8 1332 aaPredicted RBP14.33□□□□□ -0.12
RTN3-201ENST00000338850 SLIT2O94813 1529 aa14.32□□□□□ -0.12
RTN3-201ENST00000338850 IRX6P78412 446 aaPredicted RBP14.32□□□□□ -0.12
RTN3-201ENST00000338850 PMFBP1Q8TBY8 1022 aa14.32□□□□□ -0.12
RTN3-201ENST00000338850 PRR36Q9H6K5 1346 aa14.31□□□□□ -0.12
RTN3-201ENST00000338850 ARHGEF10O15013 1369 aa14.31□□□□□ -0.12
RTN3-201ENST00000338850 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
RTN3-201ENST00000338850 WASLO00401 505 aaPredicted RBP14.3□□□□□ -0.12
RTN3-201ENST00000338850 NBPF1Q3BBV0 1214 aa14.3□□□□□ -0.12
RTN3-201ENST00000338850 CABLES1Q8TDN4 633 aa14.3□□□□□ -0.12
RTN3-201ENST00000338850 GJD4Q96KN9 370 aaPredicted RBP14.3□□□□□ -0.12
RTN3-201ENST00000338850 ATAD2Q6PL18 1390 aa14.3□□□□□ -0.12
RTN3-201ENST00000338850 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.29□□□□□ -0.12
RTN3-201ENST00000338850 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
RTN3-201ENST00000338850 B4GALNT3Q6L9W6 998 aa14.29□□□□□ -0.12
RTN3-201ENST00000338850 UNC5CLQ8IV45 518 aa14.29□□□□□ -0.12
RTN3-201ENST00000338850 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
RTN3-201ENST00000338850 LMOD2Q6P5Q4 547 aa14.28□□□□□ -0.12
RTN3-201ENST00000338850 POLR3GLQ9BT43 218 aa14.28□□□□□ -0.12
RTN3-201ENST00000338850 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.12
RTN3-201ENST00000338850 MSH5O43196 834 aa14.27□□□□□ -0.13
RTN3-201ENST00000338850 PLEKHG5O94827 1062 aa14.27□□□□□ -0.13
RTN3-201ENST00000338850 ABCA3Q99758 1704 aa14.27□□□□□ -0.13
RTN3-201ENST00000338850 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.13
RTN3-201ENST00000338850 GLI3P10071 1580 aa14.26□□□□□ -0.13
RTN3-201ENST00000338850 NGEFQ8N5V2 710 aa14.26□□□□□ -0.13
RTN3-201ENST00000338850 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
RTN3-201ENST00000338850 RCAN3Q9UKA8 241 aa14.25□□□□□ -0.13
RTN3-201ENST00000338850 ATP7BP35670 1465 aa14.25□□□□□ -0.13
RTN3-201ENST00000338850 ALS2Q96Q42 1657 aa14.24□□□□□ -0.13
RTN3-201ENST00000338850 VPS72Q15906 364 aa14.24□□□□□ -0.13
RTN3-201ENST00000338850 PLCH1Q4KWH8 1693 aa14.23□□□□□ -0.13
RTN3-201ENST00000338850 FAM83GA6ND36 823 aa14.23□□□□□ -0.13
RTN3-201ENST00000338850 NGDNQ8NEJ9 315 aaKnown RBP14.23□□□□□ -0.13
RTN3-201ENST00000338850 NUDT16Q96DE0 195 aaKnown RBP14.23□□□□□ -0.13
RTN3-201ENST00000338850 PANK3Q9H999 370 aa14.23□□□□□ -0.13
RTN3-201ENST00000338850 NWD2Q9ULI1 1742 aa14.22□□□□□ -0.13
RTN3-201ENST00000338850 MS4A1P11836 297 aa14.22□□□□□ -0.13
RTN3-201ENST00000338850 TCERG1O14776 1098 aaKnown RBP14.21□□□□□ -0.13
RTN3-201ENST00000338850 CDK19Q9BWU1 502 aa14.21□□□□□ -0.13
RTN3-201ENST00000338850 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
RTN3-201ENST00000338850 SEPT12Q8IYM1 358 aa14.2□□□□□ -0.14
RTN3-201ENST00000338850 ZNF521Q96K83 1311 aa14.19□□□□□ -0.14
RTN3-201ENST00000338850 ITSN1Q15811 1721 aa14.19□□□□□ -0.14
RTN3-201ENST00000338850 ONECUT3O60422 494 aaPredicted RBP14.19□□□□□ -0.14
RTN3-201ENST00000338850 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
RTN3-201ENST00000338850 CCDC125Q86Z20 511 aa14.19□□□□□ -0.14
RTN3-201ENST00000338850 CRYBG1Q9Y4K1 1723 aa14.18□□□□□ -0.14
RTN3-201ENST00000338850 TOPAZ1Q8N9V7 1692 aa14.18□□□□□ -0.14
RTN3-201ENST00000338850 QRICH2Q9H0J4 1663 aa14.18□□□□□ -0.14
RTN3-201ENST00000338850 ERICH6Q7L0X2 663 aa14.18□□□□□ -0.14
RTN3-201ENST00000338850 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
RTN3-201ENST00000338850 CCDC9Q9Y3X0 531 aaKnown RBP14.18□□□□□ -0.14
RTN3-201ENST00000338850 POLR3AO14802 1390 aaPredicted RBP14.18□□□□□ -0.14
RTN3-201ENST00000338850 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
RTN3-201ENST00000338850 COL14A1Q05707 1796 aaKnown RBP14.17□□□□□ -0.14
RTN3-201ENST00000338850 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
RTN3-201ENST00000338850 KNSTRNQ9Y448 316 aa14.17□□□□□ -0.14
RTN3-201ENST00000338850 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
RTN3-201ENST00000338850 ACEP12821 1306 aa14.16□□□□□ -0.14
RTN3-201ENST00000338850 CENPJQ9HC77 1338 aaPredicted RBP14.16□□□□□ -0.14
RTN3-201ENST00000338850 EP400Q96L91 3159 aa14.16□□□□□ -0.14
RTN3-201ENST00000338850 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
RTN3-201ENST00000338850 PUS7Q96PZ0 661 aaKnown RBP14.16□□□□□ -0.14
RTN3-201ENST00000338850 BRWD3Q6RI45 1802 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms