RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
TREM2-201ENST00000338469 EIF3AQ14152 1382 aaKnown RBP16.69■□□□□ 0.26
TREM2-201ENST00000338469 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
TREM2-201ENST00000338469 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
TREM2-201ENST00000338469 NUTM2GQ5VZR2 741 aa16.68■□□□□ 0.26
TREM2-201ENST00000338469 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
TREM2-201ENST00000338469 BTG4Q9NY30 223 aa16.68■□□□□ 0.26
TREM2-201ENST00000338469 ACEP12821 1306 aa16.68■□□□□ 0.26
TREM2-201ENST00000338469 NWD2Q9ULI1 1742 aa16.67■□□□□ 0.26
TREM2-201ENST00000338469 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
TREM2-201ENST00000338469 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
TREM2-201ENST00000338469 POLR3AO14802 1390 aaPredicted RBP16.66■□□□□ 0.26
TREM2-201ENST00000338469 TOPAZ1Q8N9V7 1692 aa16.66■□□□□ 0.26
TREM2-201ENST00000338469 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
TREM2-201ENST00000338469 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
TREM2-201ENST00000338469 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
TREM2-201ENST00000338469 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
TREM2-201ENST00000338469 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
TREM2-201ENST00000338469 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
TREM2-201ENST00000338469 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
TREM2-201ENST00000338469 ITSN1Q15811 1721 aa16.64■□□□□ 0.25
TREM2-201ENST00000338469 CENPJQ9HC77 1338 aaPredicted RBP16.64■□□□□ 0.25
TREM2-201ENST00000338469 KIAA0232Q92628 1395 aa16.63■□□□□ 0.25
TREM2-201ENST00000338469 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
TREM2-201ENST00000338469 FAM98CQ17RN3 349 aaKnown RBP16.62■□□□□ 0.25
TREM2-201ENST00000338469 ZC3H6P61129 1189 aaKnown RBP16.61■□□□□ 0.25
TREM2-201ENST00000338469 DEFB132Q7Z7B7 95 aa16.61■□□□□ 0.25
TREM2-201ENST00000338469 TRPM1Q7Z4N2 1603 aa16.6■□□□□ 0.25
TREM2-201ENST00000338469 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
TREM2-201ENST00000338469 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
TREM2-201ENST00000338469 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
TREM2-201ENST00000338469 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
TREM2-201ENST00000338469 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
TREM2-201ENST00000338469 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
TREM2-201ENST00000338469 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
TREM2-201ENST00000338469 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
TREM2-201ENST00000338469 PRDM11Q9NQV5 511 aa16.59■□□□□ 0.25
TREM2-201ENST00000338469 CABP1Q9NZU7 370 aa16.59■□□□□ 0.25
TREM2-201ENST00000338469 CCDC125Q86Z20 511 aa16.58■□□□□ 0.24
TREM2-201ENST00000338469 ABTB2Q8N961 1025 aa16.57■□□□□ 0.24
TREM2-201ENST00000338469 BLMP54132 1417 aaPredicted RBP16.56■□□□□ 0.24
TREM2-201ENST00000338469 USP19O94966 1318 aa16.56■□□□□ 0.24
TREM2-201ENST00000338469 STRN4Q9NRL3 753 aa16.55■□□□□ 0.24
TREM2-201ENST00000338469 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
TREM2-201ENST00000338469 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
TREM2-201ENST00000338469 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
TREM2-201ENST00000338469 TONSLQ96HA7 1378 aa16.54■□□□□ 0.24
TREM2-201ENST00000338469 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
TREM2-201ENST00000338469 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
TREM2-201ENST00000338469 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
TREM2-201ENST00000338469 A0A0G2JS52 829 aa16.53■□□□□ 0.24
TREM2-201ENST00000338469 GCP02774 474 aa16.53■□□□□ 0.24
TREM2-201ENST00000338469 MYT1Q01538 1121 aa16.53■□□□□ 0.24
TREM2-201ENST00000338469 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
TREM2-201ENST00000338469 USP6P35125 1406 aa16.52■□□□□ 0.23
TREM2-201ENST00000338469 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
TREM2-201ENST00000338469 CPDO75976 1380 aa16.51■□□□□ 0.23
TREM2-201ENST00000338469 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
TREM2-201ENST00000338469 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
TREM2-201ENST00000338469 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
TREM2-201ENST00000338469 NLRP6P59044 892 aa16.48■□□□□ 0.23
TREM2-201ENST00000338469 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
TREM2-201ENST00000338469 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
TREM2-201ENST00000338469 EVA1CP58658 441 aa16.47■□□□□ 0.23
TREM2-201ENST00000338469 AXIN2Q9Y2T1 843 aa16.47■□□□□ 0.23
TREM2-201ENST00000338469 TTC21BQ7Z4L5 1316 aa16.46■□□□□ 0.23
TREM2-201ENST00000338469 SLIT3O75094 1523 aa16.46■□□□□ 0.23
TREM2-201ENST00000338469 EN1Q05925 392 aaPredicted RBP16.46■□□□□ 0.23
TREM2-201ENST00000338469 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
TREM2-201ENST00000338469 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
TREM2-201ENST00000338469 BARGINQ6ZT62 677 aa16.45■□□□□ 0.22
TREM2-201ENST00000338469 BRD4O60885 1362 aaPredicted RBP16.45■□□□□ 0.22
TREM2-201ENST00000338469 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
TREM2-201ENST00000338469 COL18A1P39060 1754 aa16.45■□□□□ 0.22
TREM2-201ENST00000338469 SF3B2Q13435 895 aaKnown RBP16.44■□□□□ 0.22
TREM2-201ENST00000338469 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
TREM2-201ENST00000338469 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
TREM2-201ENST00000338469 CD163L1Q9NR16 1453 aa16.42■□□□□ 0.22
TREM2-201ENST00000338469 TRIM37O94972 964 aa16.42■□□□□ 0.22
TREM2-201ENST00000338469 TCP11L2Q8N4U5 519 aa16.42■□□□□ 0.22
TREM2-201ENST00000338469 TNS1Q9HBL0 1735 aaKnown RBP16.42■□□□□ 0.22
TREM2-201ENST00000338469 AATKQ6ZMQ8 1374 aa16.41■□□□□ 0.22
TREM2-201ENST00000338469 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
TREM2-201ENST00000338469 SOX12O15370 315 aa16.41■□□□□ 0.22
TREM2-201ENST00000338469 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
TREM2-201ENST00000338469 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
TREM2-201ENST00000338469 ARHGEF25Q86VW2 580 aa16.41■□□□□ 0.22
TREM2-201ENST00000338469 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
TREM2-201ENST00000338469 SBNO2Q9Y2G9 1366 aa16.4■□□□□ 0.22
TREM2-201ENST00000338469 BAG6P46379 1132 aa16.4■□□□□ 0.22
TREM2-201ENST00000338469 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
TREM2-201ENST00000338469 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
TREM2-201ENST00000338469 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
TREM2-201ENST00000338469 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
TREM2-201ENST00000338469 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
TREM2-201ENST00000338469 FAM196AQ6ZSG2 479 aa16.38■□□□□ 0.21
TREM2-201ENST00000338469 NME9Q86XW9 330 aa16.38■□□□□ 0.21
TREM2-201ENST00000338469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.38■□□□□ 0.21
TREM2-201ENST00000338469 TESK2Q96S53 571 aa16.38■□□□□ 0.21
TREM2-201ENST00000338469 DISP2A7MBM2 1401 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms