RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 CCDC136Q96JN2 1154 aa12.07□□□□□ -0.48
CLDN2-201ENST00000336803 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
CLDN2-201ENST00000336803 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
CLDN2-201ENST00000336803 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
CLDN2-201ENST00000336803 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
CLDN2-201ENST00000336803 PTCH1Q13635 1447 aa12.06□□□□□ -0.48
CLDN2-201ENST00000336803 NRKQ7Z2Y5 1582 aa12.06□□□□□ -0.48
CLDN2-201ENST00000336803 EXOC6Q8TAG9 804 aa12.06□□□□□ -0.48
CLDN2-201ENST00000336803 TBX22Q9Y458 520 aa12.06□□□□□ -0.48
CLDN2-201ENST00000336803 NUDT16Q96DE0 195 aaKnown RBP12.06□□□□□ -0.48
CLDN2-201ENST00000336803 EID1Q9Y6B2 187 aa12.06□□□□□ -0.48
CLDN2-201ENST00000336803 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
CLDN2-201ENST00000336803 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
CLDN2-201ENST00000336803 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
CLDN2-201ENST00000336803 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
CLDN2-201ENST00000336803 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
CLDN2-201ENST00000336803 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
CLDN2-201ENST00000336803 THEMISQ8N1K5 641 aaPredicted RBP12.04□□□□□ -0.48
CLDN2-201ENST00000336803 RBM19Q9Y4C8 960 aaKnown RBP12.04□□□□□ -0.48
CLDN2-201ENST00000336803 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
CLDN2-201ENST00000336803 ZNF692Q9BU19 519 aaPredicted RBP12.04□□□□□ -0.48
CLDN2-201ENST00000336803 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
CLDN2-201ENST00000336803 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
CLDN2-201ENST00000336803 CEP170BQ9Y4F5 1589 aaPredicted RBP12.04□□□□□ -0.48
CLDN2-201ENST00000336803 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
CLDN2-201ENST00000336803 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
CLDN2-201ENST00000336803 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
CLDN2-201ENST00000336803 CDK12Q9NYV4 1490 aaPredicted RBP12.02□□□□□ -0.49
CLDN2-201ENST00000336803 PIK3R4Q99570 1358 aa12.02□□□□□ -0.49
CLDN2-201ENST00000336803 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
CLDN2-201ENST00000336803 PLIN1O60240 522 aa12.02□□□□□ -0.49
CLDN2-201ENST00000336803 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
CLDN2-201ENST00000336803 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
CLDN2-201ENST00000336803 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLDN2-201ENST00000336803 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
CLDN2-201ENST00000336803 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
CLDN2-201ENST00000336803 NALCNQ8IZF0 1738 aa12.01□□□□□ -0.49
CLDN2-201ENST00000336803 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
CLDN2-201ENST00000336803 CRBNQ96SW2 442 aa12□□□□□ -0.49
CLDN2-201ENST00000336803 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
CLDN2-201ENST00000336803 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
CLDN2-201ENST00000336803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLDN2-201ENST00000336803 IL16Q14005 1332 aa11.98□□□□□ -0.49
CLDN2-201ENST00000336803 FCHSD2O94868 740 aa11.98□□□□□ -0.49
CLDN2-201ENST00000336803 AMOTL2Q9Y2J4 779 aa11.98□□□□□ -0.49
CLDN2-201ENST00000336803 LRRC7Q96NW7 1537 aa11.97□□□□□ -0.49
CLDN2-201ENST00000336803 TMPOP42166 694 aaKnown RBP11.97□□□□□ -0.49
CLDN2-201ENST00000336803 NME9Q86XW9 330 aa11.97□□□□□ -0.49
CLDN2-201ENST00000336803 SLC26A8Q96RN1 970 aa11.97□□□□□ -0.49
CLDN2-201ENST00000336803 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
CLDN2-201ENST00000336803 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
CLDN2-201ENST00000336803 USP6P35125 1406 aa11.97□□□□□ -0.49
CLDN2-201ENST00000336803 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
CLDN2-201ENST00000336803 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
CLDN2-201ENST00000336803 CHD2O14647 1828 aaKnown RBP11.96□□□□□ -0.49
CLDN2-201ENST00000336803 OVOS2A0A0J9YW53 1432 aa11.96□□□□□ -0.49
CLDN2-201ENST00000336803 OVOS2Q6IE36 1432 aa11.96□□□□□ -0.49
CLDN2-201ENST00000336803 PDE3AQ14432 1141 aa11.96□□□□□ -0.49
CLDN2-201ENST00000336803 MYH16Q9H6N6 1097 aa11.96□□□□□ -0.49
CLDN2-201ENST00000336803 ANKARQ7Z5J8 1434 aa11.96□□□□□ -0.49
CLDN2-201ENST00000336803 COG3Q96JB2 828 aa11.96□□□□□ -0.5
CLDN2-201ENST00000336803 PKNOX2Q96KN3 472 aa11.96□□□□□ -0.5
CLDN2-201ENST00000336803 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.5
CLDN2-201ENST00000336803 USP54Q70EL1 1684 aa11.96□□□□□ -0.5
CLDN2-201ENST00000336803 TTC21BQ7Z4L5 1316 aa11.96□□□□□ -0.5
CLDN2-201ENST00000336803 FANCIQ9NVI1 1328 aa11.96□□□□□ -0.5
CLDN2-201ENST00000336803 FMN2Q9NZ56 1722 aa11.95□□□□□ -0.5
CLDN2-201ENST00000336803 USP31Q70CQ4 1352 aa11.95□□□□□ -0.5
CLDN2-201ENST00000336803 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
CLDN2-201ENST00000336803 IL13P35225 146 aa11.95□□□□□ -0.5
CLDN2-201ENST00000336803 ACEP12821 1306 aa11.95□□□□□ -0.5
CLDN2-201ENST00000336803 BCAR3O75815 825 aa11.95□□□□□ -0.5
CLDN2-201ENST00000336803 NEUROD2Q15784 382 aa11.95□□□□□ -0.5
CLDN2-201ENST00000336803 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
CLDN2-201ENST00000336803 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
CLDN2-201ENST00000336803 RARSP54136 660 aaKnown RBP11.94□□□□□ -0.5
CLDN2-201ENST00000336803 MAPK8IP3Q9UPT6 1336 aa11.94□□□□□ -0.5
CLDN2-201ENST00000336803 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
CLDN2-201ENST00000336803 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
CLDN2-201ENST00000336803 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
CLDN2-201ENST00000336803 TTC21AQ8NDW8 1320 aa11.93□□□□□ -0.5
CLDN2-201ENST00000336803 SETD1BQ9UPS6 1966 aaKnown RBP11.93□□□□□ -0.5
CLDN2-201ENST00000336803 TCERG1O14776 1098 aaKnown RBP11.93□□□□□ -0.5
CLDN2-201ENST00000336803 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
CLDN2-201ENST00000336803 RGPD1P0DJD0 1748 aa11.92□□□□□ -0.5
CLDN2-201ENST00000336803 AAMPQ13685 434 aa11.92□□□□□ -0.5
CLDN2-201ENST00000336803 MS4A1P11836 297 aa11.91□□□□□ -0.5
CLDN2-201ENST00000336803 PEAK1Q9H792 1746 aa11.91□□□□□ -0.5
CLDN2-201ENST00000336803 FBLN1P23142 703 aa11.91□□□□□ -0.5
CLDN2-201ENST00000336803 CENPQQ7L2Z9 268 aaPredicted RBP11.91□□□□□ -0.5
CLDN2-201ENST00000336803 RIPK4P57078 832 aa11.91□□□□□ -0.5
CLDN2-201ENST00000336803 ANKLE2Q86XL3 938 aa11.9□□□□□ -0.5
CLDN2-201ENST00000336803 PIK3C2AO00443 1686 aa11.9□□□□□ -0.5
CLDN2-201ENST00000336803 MARF1Q9Y4F3 1742 aaKnown RBP11.89□□□□□ -0.51
CLDN2-201ENST00000336803 PRKAR2BP31323 418 aa11.89□□□□□ -0.51
CLDN2-201ENST00000336803 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
CLDN2-201ENST00000336803 DLG5Q8TDM6 1919 aa11.89□□□□□ -0.51
CLDN2-201ENST00000336803 KCNA6P17658 529 aa11.88□□□□□ -0.51
CLDN2-201ENST00000336803 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
CLDN2-201ENST00000336803 RRS1Q15050 365 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms