RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
LRAT-201ENST00000336356 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
LRAT-201ENST00000336356 GRPEL1Q9HAV7 217 aa13.61□□□□□ -0.23
LRAT-201ENST00000336356 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
LRAT-201ENST00000336356 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
LRAT-201ENST00000336356 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
LRAT-201ENST00000336356 PHF14O94880 888 aa13.6□□□□□ -0.23
LRAT-201ENST00000336356 ADAMTS2O95450 1211 aa13.6□□□□□ -0.23
LRAT-201ENST00000336356 STRN4Q9NRL3 753 aa13.6□□□□□ -0.23
LRAT-201ENST00000336356 PZPP20742 1482 aa13.6□□□□□ -0.23
LRAT-201ENST00000336356 GOLGA6L6A8MZA4 724 aa13.6□□□□□ -0.23
LRAT-201ENST00000336356 CLCN1P35523 988 aa13.6□□□□□ -0.23
LRAT-201ENST00000336356 LTV1Q96GA3 475 aaPredicted RBP13.6□□□□□ -0.23
LRAT-201ENST00000336356 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
LRAT-201ENST00000336356 NRDCO43847 1150 aa13.59□□□□□ -0.23
LRAT-201ENST00000336356 KIAA1211Q6ZU35 1233 aa13.59□□□□□ -0.23
LRAT-201ENST00000336356 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
LRAT-201ENST00000336356 MCM4P33991 863 aa13.59□□□□□ -0.23
LRAT-201ENST00000336356 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
LRAT-201ENST00000336356 HDAC5Q9UQL6 1122 aa13.59□□□□□ -0.23
LRAT-201ENST00000336356 WASLO00401 505 aaPredicted RBP13.58□□□□□ -0.24
LRAT-201ENST00000336356 NBPF8Q3BBV2 869 aa13.58□□□□□ -0.24
LRAT-201ENST00000336356 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
LRAT-201ENST00000336356 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
LRAT-201ENST00000336356 PLEKHG1Q9ULL1 1385 aa13.58□□□□□ -0.24
LRAT-201ENST00000336356 TNNT3P45378 269 aaPredicted RBP13.58□□□□□ -0.24
LRAT-201ENST00000336356 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
LRAT-201ENST00000336356 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 MCCP23508 829 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 SIRT1Q96EB6 747 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
LRAT-201ENST00000336356 EFCAB6Q5THR3 1501 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 FOXO3O43524 673 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 COG6Q9Y2V7 657 aa13.57□□□□□ -0.24
LRAT-201ENST00000336356 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
LRAT-201ENST00000336356 NOS1P29475 1434 aa13.56□□□□□ -0.24
LRAT-201ENST00000336356 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
LRAT-201ENST00000336356 ARHGEF10O15013 1369 aa13.56□□□□□ -0.24
LRAT-201ENST00000336356 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
LRAT-201ENST00000336356 ITPRIPQ8IWB1 547 aa13.56□□□□□ -0.24
LRAT-201ENST00000336356 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
LRAT-201ENST00000336356 ADGBQ8N7X0 1667 aa13.55□□□□□ -0.24
LRAT-201ENST00000336356 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
LRAT-201ENST00000336356 ZNF771Q7L3S4 317 aaPredicted RBP13.54□□□□□ -0.24
LRAT-201ENST00000336356 ZRSR1Q15695 479 aaKnown RBP13.54□□□□□ -0.24
LRAT-201ENST00000336356 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
LRAT-201ENST00000336356 TEFQ10587 303 aa13.54□□□□□ -0.24
LRAT-201ENST00000336356 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
LRAT-201ENST00000336356 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
LRAT-201ENST00000336356 PANK3Q9H999 370 aa13.54□□□□□ -0.24
LRAT-201ENST00000336356 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
LRAT-201ENST00000336356 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
LRAT-201ENST00000336356 PLEKHO1Q53GL0 409 aaPredicted RBP13.53□□□□□ -0.24
LRAT-201ENST00000336356 ARHGEF12Q9NZN5 1544 aa13.53□□□□□ -0.24
LRAT-201ENST00000336356 ST18O60284 1047 aa13.53□□□□□ -0.24
LRAT-201ENST00000336356 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
LRAT-201ENST00000336356 NUCB2P80303 420 aa13.53□□□□□ -0.24
LRAT-201ENST00000336356 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
LRAT-201ENST00000336356 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
LRAT-201ENST00000336356 ZSCAN30Q86W11 494 aa13.53□□□□□ -0.24
LRAT-201ENST00000336356 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
LRAT-201ENST00000336356 TRPM2O94759 1503 aa13.53□□□□□ -0.24
LRAT-201ENST00000336356 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.24
LRAT-201ENST00000336356 CCDC146Q8IYE0 955 aa13.52□□□□□ -0.24
LRAT-201ENST00000336356 ZMYM4Q5VZL5 1548 aa13.52□□□□□ -0.24
LRAT-201ENST00000336356 ERVK-7P63135 1459 aa13.52□□□□□ -0.24
LRAT-201ENST00000336356 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
LRAT-201ENST00000336356 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.25
LRAT-201ENST00000336356 HSP90B1P14625 803 aaKnown RBP13.52□□□□□ -0.25
LRAT-201ENST00000336356 KDM4FA0A1W2PPD8 638 aa13.51□□□□□ -0.25
LRAT-201ENST00000336356 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
LRAT-201ENST00000336356 GOLGA6L4A6NEF3 574 aa13.51□□□□□ -0.25
LRAT-201ENST00000336356 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
LRAT-201ENST00000336356 TMEM94Q12767 1356 aa13.51□□□□□ -0.25
LRAT-201ENST00000336356 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
LRAT-201ENST00000336356 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
LRAT-201ENST00000336356 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
LRAT-201ENST00000336356 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
LRAT-201ENST00000336356 PTPRTO14522 1441 aa13.5□□□□□ -0.25
LRAT-201ENST00000336356 DISP3Q9P2K9 1392 aa13.5□□□□□ -0.25
LRAT-201ENST00000336356 EXOC5O00471 708 aa13.5□□□□□ -0.25
LRAT-201ENST00000336356 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
LRAT-201ENST00000336356 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
LRAT-201ENST00000336356 ZKSCAN2Q63HK3 967 aa13.49□□□□□ -0.25
LRAT-201ENST00000336356 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
LRAT-201ENST00000336356 SETD1BQ9UPS6 1966 aaKnown RBP13.49□□□□□ -0.25
LRAT-201ENST00000336356 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
LRAT-201ENST00000336356 APAF1O14727 1248 aa13.48□□□□□ -0.25
LRAT-201ENST00000336356 WAPLQ7Z5K2 1190 aa13.48□□□□□ -0.25
LRAT-201ENST00000336356 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
LRAT-201ENST00000336356 KIF16BQ96L93 1317 aa13.48□□□□□ -0.25
LRAT-201ENST00000336356 RXRBP28702 533 aa13.47□□□□□ -0.25
LRAT-201ENST00000336356 BAG6P46379 1132 aa13.47□□□□□ -0.25
LRAT-201ENST00000336356 ZNF335Q9H4Z2 1342 aaPredicted RBP13.47□□□□□ -0.25
LRAT-201ENST00000336356 UQCRHLA0A096LP55 91 aa13.47□□□□□ -0.25
LRAT-201ENST00000336356 UQCRHP07919 91 aa13.47□□□□□ -0.25
LRAT-201ENST00000336356 NUTM2GQ5VZR2 741 aa13.46□□□□□ -0.25
LRAT-201ENST00000336356 ADGRF5Q8IZF2 1346 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms