RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 LMOD3Q0VAK6 560 aa8.03□□□□□ -1.12
HMG20A-201ENST00000336216 ESCO1Q5FWF5 840 aa8.03□□□□□ -1.12
HMG20A-201ENST00000336216 SLC52A1Q9NWF4 448 aa8.03□□□□□ -1.12
HMG20A-201ENST00000336216 PTMAP06454 111 aaKnown RBP8.03□□□□□ -1.12
HMG20A-201ENST00000336216 NME9Q86XW9 330 aa8.03□□□□□ -1.12
HMG20A-201ENST00000336216 C22orf23Q9BZE7 217 aa8.03□□□□□ -1.12
HMG20A-201ENST00000336216 EMILIN1Q9Y6C2 1016 aa8.03□□□□□ -1.12
HMG20A-201ENST00000336216 HECW2Q9P2P5 1572 aa8.03□□□□□ -1.12
HMG20A-201ENST00000336216 DDX19BQ9UMR2 479 aa8.02□□□□□ -1.12
HMG20A-201ENST00000336216 PLA2R1Q13018 1463 aa8.02□□□□□ -1.13
HMG20A-201ENST00000336216 INO80Q9ULG1 1556 aaPredicted RBP8.02□□□□□ -1.13
HMG20A-201ENST00000336216 NSD3Q9BZ95 1437 aa8.02□□□□□ -1.13
HMG20A-201ENST00000336216 GLI2P10070 1586 aa8.02□□□□□ -1.13
HMG20A-201ENST00000336216 CHMP5Q9NZZ3 219 aa8.02□□□□□ -1.13
HMG20A-201ENST00000336216 SPATA31E1Q6ZUB1 1445 aa8.02□□□□□ -1.13
HMG20A-201ENST00000336216 BCORL1Q5H9F3 1711 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 MCM4P33991 863 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 SLFN5Q08AF3 891 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 SPINK5Q9NQ38 1064 aaPredicted RBP8.01□□□□□ -1.13
HMG20A-201ENST00000336216 RBM10P98175 930 aaKnown RBP8.01□□□□□ -1.13
HMG20A-201ENST00000336216 TESK2Q96S53 571 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 TNNQ9UQP3 1299 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 EIF2AK4Q9P2K8 1649 aaKnown RBP8.01□□□□□ -1.13
HMG20A-201ENST00000336216 XRCC6P12956 609 aaKnown RBP eCLIP8.01□□□□□ -1.13
HMG20A-201ENST00000336216 GBP4Q96PP9 640 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 NLRP2Q9NX02 1062 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 FAM13BQ9NYF5 915 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 NCKAP5LQ9HCH0 1330 aa8.01□□□□□ -1.13
HMG20A-201ENST00000336216 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
HMG20A-201ENST00000336216 MAGI2Q86UL8 1455 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 HMMRO75330 724 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 TWISTNBQ3B726 338 aaPredicted RBP8□□□□□ -1.13
HMG20A-201ENST00000336216 MCM10Q7L590 875 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 GNAI1P63096 354 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 NUDT16Q96DE0 195 aaKnown RBP8□□□□□ -1.13
HMG20A-201ENST00000336216 ZRANB1Q9UGI0 708 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 PPP6R1Q9UPN7 881 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 DDX49Q9Y6V7 483 aaKnown RBP8□□□□□ -1.13
HMG20A-201ENST00000336216 UHRF1BP1Q6BDS2 1440 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 RALGAPBQ86X10 1494 aa8□□□□□ -1.13
HMG20A-201ENST00000336216 TMPOP42166 694 aaKnown RBP8□□□□□ -1.13
HMG20A-201ENST00000336216 ABCF1Q8NE71 845 aaKnown RBP eCLIP8□□□□□ -1.13
HMG20A-201ENST00000336216 FAM83GA6ND36 823 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 SLC4A2P04920 1241 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 C1orf141Q5JVX7 400 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 ATP10AO60312 1499 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 NOS1P29475 1434 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
HMG20A-201ENST00000336216 PLEKHH1Q9ULM0 1364 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 TULP1O00294 542 aaPredicted RBP7.99□□□□□ -1.13
HMG20A-201ENST00000336216 ZMYND15Q9H091 742 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 C9orf78Q9NZ63 289 aaPredicted RBP7.99□□□□□ -1.13
HMG20A-201ENST00000336216 CCDC61Q9Y6R9 512 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 USHBP1Q8N6Y0 703 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 CARD14Q9BXL6 1004 aa7.99□□□□□ -1.13
HMG20A-201ENST00000336216 KDM5CP41229 1560 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 MRE11P49959 708 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 SSH1Q8WYL5 1049 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 TET3O43151 1660 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 ESPNB1AK53 854 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
HMG20A-201ENST00000336216 ZC3H6P61129 1189 aaKnown RBP7.98□□□□□ -1.13
HMG20A-201ENST00000336216 CFAP65Q6ZU64 1925 aaKnown RBP7.98□□□□□ -1.13
HMG20A-201ENST00000336216 DDX11L8A8MPP1 907 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 MCCP23508 829 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 GRPEL1Q9HAV7 217 aa7.98□□□□□ -1.13
HMG20A-201ENST00000336216 RPGRIP1LQ68CZ1 1315 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 GORABQ5T7V8 394 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 MPNDQ8N594 471 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 DMRT2Q9Y5R5 561 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 KDM2BQ8NHM5 1336 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 PRAG1Q86YV5 1406 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 TMEM57Q8N5G2 664 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 ANO2Q9NQ90 1003 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 FOXO3O43524 673 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 EVA1CP58658 441 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 ATF7IPQ6VMQ6 1270 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 API5Q9BZZ5 524 aaKnown RBP7.97□□□□□ -1.13
HMG20A-201ENST00000336216 PCDHB15Q9Y5E8 787 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 TRPM2O94759 1503 aa7.97□□□□□ -1.13
HMG20A-201ENST00000336216 PRDM15P57071 1507 aaPredicted RBP7.97□□□□□ -1.13
HMG20A-201ENST00000336216 DIP2BQ9P265 1576 aa7.96□□□□□ -1.13
HMG20A-201ENST00000336216 KIDINS220Q9ULH0 1771 aa7.96□□□□□ -1.13
HMG20A-201ENST00000336216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.96□□□□□ -1.13
HMG20A-201ENST00000336216 GOLGA6L4A6NEF3 574 aa7.96□□□□□ -1.13
HMG20A-201ENST00000336216 PROSER2Q86WR7 435 aaPredicted RBP7.96□□□□□ -1.13
HMG20A-201ENST00000336216 KIF16BQ96L93 1317 aa7.96□□□□□ -1.13
HMG20A-201ENST00000336216 MAP3K4Q9Y6R4 1608 aa7.96□□□□□ -1.14
HMG20A-201ENST00000336216 RARSP54136 660 aaKnown RBP7.96□□□□□ -1.14
HMG20A-201ENST00000336216 C14orf93Q9H972 538 aaKnown RBP7.96□□□□□ -1.14
HMG20A-201ENST00000336216 R3HCC1Q9Y3T6 440 aaKnown RBP7.96□□□□□ -1.14
HMG20A-201ENST00000336216 PTPRTO14522 1441 aa7.96□□□□□ -1.14
HMG20A-201ENST00000336216 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
HMG20A-201ENST00000336216 TAF7LQ5H9L4 462 aa7.96□□□□□ -1.14
HMG20A-201ENST00000336216 E9PCH4 1651 aa7.96□□□□□ -1.14
HMG20A-201ENST00000336216 PARD3Q8TEW0 1356 aa7.95□□□□□ -1.14
HMG20A-201ENST00000336216 TSPOAP1O95153 1857 aa7.95□□□□□ -1.14
HMG20A-201ENST00000336216 F6X3S4 739 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms