RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 PLEKHG3A1L390 1219 aa17.93■□□□□ 0.46
LMO1-201ENST00000335790 MTHFSP49914 203 aa17.93■□□□□ 0.46
LMO1-201ENST00000335790 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
LMO1-201ENST00000335790 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
LMO1-201ENST00000335790 PNPLA6Q8IY17 1366 aa17.92■□□□□ 0.46
LMO1-201ENST00000335790 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
LMO1-201ENST00000335790 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
LMO1-201ENST00000335790 PIP4K2BP78356 416 aa17.91■□□□□ 0.46
LMO1-201ENST00000335790 ANKARQ7Z5J8 1434 aa17.9■□□□□ 0.46
LMO1-201ENST00000335790 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
LMO1-201ENST00000335790 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.45
LMO1-201ENST00000335790 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
LMO1-201ENST00000335790 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
LMO1-201ENST00000335790 NWD1Q149M9 1564 aa17.88■□□□□ 0.45
LMO1-201ENST00000335790 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
LMO1-201ENST00000335790 NALCNQ8IZF0 1738 aa17.87■□□□□ 0.45
LMO1-201ENST00000335790 HSPA1LP34931 641 aa17.87■□□□□ 0.45
LMO1-201ENST00000335790 NPHP4O75161 1426 aaPredicted RBP17.87■□□□□ 0.45
LMO1-201ENST00000335790 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
LMO1-201ENST00000335790 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
LMO1-201ENST00000335790 USP6P35125 1406 aa17.85■□□□□ 0.45
LMO1-201ENST00000335790 TRMT2AQ8IZ69 625 aaKnown RBP17.85■□□□□ 0.45
LMO1-201ENST00000335790 USP54Q70EL1 1684 aa17.84■□□□□ 0.45
LMO1-201ENST00000335790 KCNA6P17658 529 aa17.84■□□□□ 0.45
LMO1-201ENST00000335790 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
LMO1-201ENST00000335790 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
LMO1-201ENST00000335790 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.45
LMO1-201ENST00000335790 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.45
LMO1-201ENST00000335790 APAF1O14727 1248 aa17.83■□□□□ 0.44
LMO1-201ENST00000335790 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.44
LMO1-201ENST00000335790 ACEP12821 1306 aa17.82■□□□□ 0.44
LMO1-201ENST00000335790 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
LMO1-201ENST00000335790 CCDC146Q8IYE0 955 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
LMO1-201ENST00000335790 LRRC7Q96NW7 1537 aa17.81■□□□□ 0.44
LMO1-201ENST00000335790 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
LMO1-201ENST00000335790 DUSP27Q5VZP5 1158 aa17.8■□□□□ 0.44
LMO1-201ENST00000335790 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
LMO1-201ENST00000335790 RCAN3Q9UKA8 241 aa17.8■□□□□ 0.44
LMO1-201ENST00000335790 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
LMO1-201ENST00000335790 NME9Q86XW9 330 aa17.79■□□□□ 0.44
LMO1-201ENST00000335790 ADGRL3Q9HAR2 1447 aa17.79■□□□□ 0.44
LMO1-201ENST00000335790 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
LMO1-201ENST00000335790 TOM1O60784 492 aa17.78■□□□□ 0.44
LMO1-201ENST00000335790 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.44
LMO1-201ENST00000335790 COG3Q96JB2 828 aa17.77■□□□□ 0.44
LMO1-201ENST00000335790 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.44
LMO1-201ENST00000335790 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
LMO1-201ENST00000335790 E9PSI1 815 aa17.75■□□□□ 0.43
LMO1-201ENST00000335790 RRP1P56182 461 aaKnown RBP17.75■□□□□ 0.43
LMO1-201ENST00000335790 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
LMO1-201ENST00000335790 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
LMO1-201ENST00000335790 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
LMO1-201ENST00000335790 U2AF1L5P0DN76 240 aaPredicted RBP17.74■□□□□ 0.43
LMO1-201ENST00000335790 U2AF1Q01081 240 aaKnown RBP eCLIP17.74■□□□□ 0.43
LMO1-201ENST00000335790 WDR63Q8IWG1 891 aa17.74■□□□□ 0.43
LMO1-201ENST00000335790 PNNQ9H307 717 aaKnown RBP17.74■□□□□ 0.43
LMO1-201ENST00000335790 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
LMO1-201ENST00000335790 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
LMO1-201ENST00000335790 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
LMO1-201ENST00000335790 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
LMO1-201ENST00000335790 FCHSD2O94868 740 aa17.71■□□□□ 0.43
LMO1-201ENST00000335790 IL13P35225 146 aa17.7■□□□□ 0.42
LMO1-201ENST00000335790 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
LMO1-201ENST00000335790 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
LMO1-201ENST00000335790 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
LMO1-201ENST00000335790 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
LMO1-201ENST00000335790 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
LMO1-201ENST00000335790 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
LMO1-201ENST00000335790 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
LMO1-201ENST00000335790 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
LMO1-201ENST00000335790 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
LMO1-201ENST00000335790 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
LMO1-201ENST00000335790 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
LMO1-201ENST00000335790 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
LMO1-201ENST00000335790 FBLN1P23142 703 aa17.66■□□□□ 0.42
LMO1-201ENST00000335790 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
LMO1-201ENST00000335790 IL16Q14005 1332 aa17.66■□□□□ 0.42
LMO1-201ENST00000335790 KIF1AQ12756 1690 aa17.64■□□□□ 0.42
LMO1-201ENST00000335790 PHF8Q9UPP1 1060 aa17.64■□□□□ 0.41
LMO1-201ENST00000335790 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
LMO1-201ENST00000335790 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
LMO1-201ENST00000335790 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
LMO1-201ENST00000335790 DCCP43146 1447 aa17.63■□□□□ 0.41
LMO1-201ENST00000335790 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
LMO1-201ENST00000335790 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
LMO1-201ENST00000335790 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
LMO1-201ENST00000335790 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
LMO1-201ENST00000335790 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
LMO1-201ENST00000335790 MST1RQ04912 1400 aa17.6■□□□□ 0.41
LMO1-201ENST00000335790 TRPM3Q9HCF6 1732 aaPredicted RBP17.6■□□□□ 0.41
LMO1-201ENST00000335790 FLT4P35916 1363 aa17.59■□□□□ 0.41
LMO1-201ENST00000335790 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
LMO1-201ENST00000335790 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms