RNA–Protein interactions for RNA: ENST00000335658.6

DPPA4-201, Transcript of developmental pluripotency associated 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DPPA4, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-201ENST00000335658 TERF2IPQ9NYB0 399 aa9.84□□□□□ -0.83
DPPA4-201ENST00000335658 CABP1Q9NZU7 370 aa9.84□□□□□ -0.83
DPPA4-201ENST00000335658 NPHP3Q7Z494 1330 aa9.84□□□□□ -0.83
DPPA4-201ENST00000335658 ORAI2Q96SN7 254 aa9.83□□□□□ -0.84
DPPA4-201ENST00000335658 PHLPP1O60346 1717 aa9.83□□□□□ -0.84
DPPA4-201ENST00000335658 ACEP12821 1306 aa9.83□□□□□ -0.84
DPPA4-201ENST00000335658 ALS2Q96Q42 1657 aa9.83□□□□□ -0.84
DPPA4-201ENST00000335658 HDGFL2Q7Z4V5 671 aaPredicted RBP9.83□□□□□ -0.84
DPPA4-201ENST00000335658 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
DPPA4-201ENST00000335658 USP6P35125 1406 aa9.82□□□□□ -0.84
DPPA4-201ENST00000335658 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
DPPA4-201ENST00000335658 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
DPPA4-201ENST00000335658 COL16A1Q07092 1604 aaPredicted RBP9.82□□□□□ -0.84
DPPA4-201ENST00000335658 NEFLP07196 543 aa9.82□□□□□ -0.84
DPPA4-201ENST00000335658 PSME1Q06323 249 aa9.82□□□□□ -0.84
DPPA4-201ENST00000335658 SENP3-EIF4A1A0A087X0R7 540 aa9.82□□□□□ -0.84
DPPA4-201ENST00000335658 SLC12A5Q9H2X9 1139 aa9.82□□□□□ -0.84
DPPA4-201ENST00000335658 A0A1W2PP64 1363 aa9.81□□□□□ -0.84
DPPA4-201ENST00000335658 COL22A1Q8NFW1 1626 aaPredicted RBP9.81□□□□□ -0.84
DPPA4-201ENST00000335658 NGDNQ8NEJ9 315 aaKnown RBP9.81□□□□□ -0.84
DPPA4-201ENST00000335658 TTC21AQ8NDW8 1320 aa9.81□□□□□ -0.84
DPPA4-201ENST00000335658 KIF20BQ96Q89 1820 aa9.81□□□□□ -0.84
DPPA4-201ENST00000335658 KTN1Q86UP2 1357 aaKnown RBP9.81□□□□□ -0.84
DPPA4-201ENST00000335658 NUTM2FA1L443 756 aa9.8□□□□□ -0.84
DPPA4-201ENST00000335658 IRX6P78412 446 aaPredicted RBP9.8□□□□□ -0.84
DPPA4-201ENST00000335658 MED1Q15648 1581 aaPredicted RBP9.8□□□□□ -0.84
DPPA4-201ENST00000335658 SHPRHQ149N8 1683 aa9.8□□□□□ -0.84
DPPA4-201ENST00000335658 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
DPPA4-201ENST00000335658 TMC1Q8TDI8 760 aa9.8□□□□□ -0.84
DPPA4-201ENST00000335658 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
DPPA4-201ENST00000335658 NPC1L1Q9UHC9 1359 aa9.8□□□□□ -0.84
DPPA4-201ENST00000335658 KRT28Q7Z3Y7 464 aa9.79□□□□□ -0.84
DPPA4-201ENST00000335658 PMFBP1Q8TBY8 1022 aa9.79□□□□□ -0.84
DPPA4-201ENST00000335658 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
DPPA4-201ENST00000335658 USP31Q70CQ4 1352 aa9.79□□□□□ -0.84
DPPA4-201ENST00000335658 TNS3Q68CZ2 1445 aa9.79□□□□□ -0.84
DPPA4-201ENST00000335658 NSD2O96028 1365 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 CRYBG1Q9Y4K1 1723 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 PIK3C2AO00443 1686 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 ARHGEF10O15013 1369 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 TTC21BQ7Z4L5 1316 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 FOXO3O43524 673 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 PANK3Q9H999 370 aa9.78□□□□□ -0.84
DPPA4-201ENST00000335658 MARF1Q9Y4F3 1742 aaKnown RBP9.78□□□□□ -0.84
DPPA4-201ENST00000335658 PRKRIP1Q9H875 184 aaPredicted RBP9.78□□□□□ -0.84
DPPA4-201ENST00000335658 LRRC59Q96AG4 307 aaKnown RBP9.77□□□□□ -0.85
DPPA4-201ENST00000335658 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
DPPA4-201ENST00000335658 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
DPPA4-201ENST00000335658 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
DPPA4-201ENST00000335658 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
DPPA4-201ENST00000335658 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
DPPA4-201ENST00000335658 SLIT3O75094 1523 aa9.76□□□□□ -0.85
DPPA4-201ENST00000335658 ABCA3Q99758 1704 aa9.76□□□□□ -0.85
DPPA4-201ENST00000335658 USP19O94966 1318 aa9.75□□□□□ -0.85
DPPA4-201ENST00000335658 PHRF1Q9P1Y6 1649 aaKnown RBP9.75□□□□□ -0.85
DPPA4-201ENST00000335658 OVOS2A0A0J9YW53 1432 aa9.74□□□□□ -0.85
DPPA4-201ENST00000335658 OVOS2Q6IE36 1432 aa9.74□□□□□ -0.85
DPPA4-201ENST00000335658 JCADQ9P266 1359 aa9.74□□□□□ -0.85
DPPA4-201ENST00000335658 KNSTRNQ9Y448 316 aa9.74□□□□□ -0.85
DPPA4-201ENST00000335658 PNPLA6Q8IY17 1366 aa9.74□□□□□ -0.85
DPPA4-201ENST00000335658 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
DPPA4-201ENST00000335658 AMER1Q5JTC6 1135 aaPredicted RBP9.73□□□□□ -0.85
DPPA4-201ENST00000335658 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
DPPA4-201ENST00000335658 ABCC6O95255 1503 aa9.73□□□□□ -0.85
DPPA4-201ENST00000335658 FYB1O15117 783 aa9.73□□□□□ -0.85
DPPA4-201ENST00000335658 NLRP13Q86W25 1043 aa9.73□□□□□ -0.85
DPPA4-201ENST00000335658 HSPA1LP34931 641 aa9.72□□□□□ -0.85
DPPA4-201ENST00000335658 SPATA31A6Q5VVP1 1343 aa9.72□□□□□ -0.85
DPPA4-201ENST00000335658 NFAT5O94916 1531 aa9.71□□□□□ -0.85
DPPA4-201ENST00000335658 ABTB2Q8N961 1025 aa9.71□□□□□ -0.85
DPPA4-201ENST00000335658 ANO8Q9HCE9 1232 aaPredicted RBP9.71□□□□□ -0.85
DPPA4-201ENST00000335658 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.86
DPPA4-201ENST00000335658 AATKQ6ZMQ8 1374 aa9.71□□□□□ -0.86
DPPA4-201ENST00000335658 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
DPPA4-201ENST00000335658 NME9Q86XW9 330 aa9.7□□□□□ -0.86
DPPA4-201ENST00000335658 KCNH5Q8NCM2 988 aa9.7□□□□□ -0.86
DPPA4-201ENST00000335658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.7□□□□□ -0.86
DPPA4-201ENST00000335658 COG3Q96JB2 828 aa9.7□□□□□ -0.86
DPPA4-201ENST00000335658 CPDO75976 1380 aa9.7□□□□□ -0.86
DPPA4-201ENST00000335658 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
DPPA4-201ENST00000335658 NLRP6P59044 892 aa9.69□□□□□ -0.86
DPPA4-201ENST00000335658 PARD3Q8TEW0 1356 aa9.68□□□□□ -0.86
DPPA4-201ENST00000335658 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
DPPA4-201ENST00000335658 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
DPPA4-201ENST00000335658 COL18A1P39060 1754 aa9.68□□□□□ -0.86
DPPA4-201ENST00000335658 RALBP1Q15311 655 aa9.68□□□□□ -0.86
DPPA4-201ENST00000335658 LTN1O94822 1766 aa9.67□□□□□ -0.86
DPPA4-201ENST00000335658 MAP2P11137 1827 aaKnown RBP9.67□□□□□ -0.86
DPPA4-201ENST00000335658 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
DPPA4-201ENST00000335658 GGNBP2Q9H3C7 697 aa9.67□□□□□ -0.86
DPPA4-201ENST00000335658 NWD2Q9ULI1 1742 aa9.67□□□□□ -0.86
DPPA4-201ENST00000335658 GCP02774 474 aa9.66□□□□□ -0.86
DPPA4-201ENST00000335658 MORC1Q86VD1 984 aa9.66□□□□□ -0.86
DPPA4-201ENST00000335658 LMO7Q8WWI1 1683 aa9.66□□□□□ -0.86
DPPA4-201ENST00000335658 ZRANB1Q9UGI0 708 aa9.66□□□□□ -0.86
DPPA4-201ENST00000335658 INSRP06213 1382 aa9.65□□□□□ -0.86
DPPA4-201ENST00000335658 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.86
DPPA4-201ENST00000335658 SALL2Q9Y467 1007 aaPredicted RBP9.65□□□□□ -0.86
DPPA4-201ENST00000335658 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms