RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 CLASRPQ8N2M8 674 aaKnown RBP19.87■□□□□ 0.77
PDZD8-201ENST00000334464 EHBP1L1Q8N3D4 1523 aa19.87■□□□□ 0.77
PDZD8-201ENST00000334464 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.87■□□□□ 0.77
PDZD8-201ENST00000334464 ZNHIT6Q9NWK9 470 aaKnown RBP19.87■□□□□ 0.77
PDZD8-201ENST00000334464 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
PDZD8-201ENST00000334464 MRE11P49959 708 aa19.86■□□□□ 0.77
PDZD8-201ENST00000334464 GOLGA6L10A6NI86 522 aa19.86■□□□□ 0.77
PDZD8-201ENST00000334464 WASHC4Q2M389 1173 aa19.86■□□□□ 0.77
PDZD8-201ENST00000334464 CCDC66A2RUB6 948 aa19.85■□□□□ 0.77
PDZD8-201ENST00000334464 RABEP1Q15276 862 aa19.85■□□□□ 0.77
PDZD8-201ENST00000334464 IQCEQ6IPM2 695 aa19.85■□□□□ 0.77
PDZD8-201ENST00000334464 EXOC6Q8TAG9 804 aa19.85■□□□□ 0.77
PDZD8-201ENST00000334464 ZFYVE27Q5T4F4 411 aa19.85■□□□□ 0.77
PDZD8-201ENST00000334464 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
PDZD8-201ENST00000334464 DACH1Q9UI36 760 aa19.84■□□□□ 0.77
PDZD8-201ENST00000334464 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
PDZD8-201ENST00000334464 H0YHG0 523 aa19.83■□□□□ 0.77
PDZD8-201ENST00000334464 NEUROD6Q96NK8 337 aa19.83■□□□□ 0.76
PDZD8-201ENST00000334464 PLIN1O60240 522 aa19.83■□□□□ 0.76
PDZD8-201ENST00000334464 FSD1Q9BTV5 496 aa19.82■□□□□ 0.76
PDZD8-201ENST00000334464 CAVIN1Q6NZI2 390 aaKnown RBP19.82■□□□□ 0.76
PDZD8-201ENST00000334464 CCDC27Q2M243 656 aa19.82■□□□□ 0.76
PDZD8-201ENST00000334464 ANKRD50Q9ULJ7 1429 aa19.82■□□□□ 0.76
PDZD8-201ENST00000334464 GOLGA6L7A0A1B0GV03 622 aa19.81■□□□□ 0.76
PDZD8-201ENST00000334464 DESP17661 470 aa19.81■□□□□ 0.76
PDZD8-201ENST00000334464 FAM13BQ9NYF5 915 aa19.81■□□□□ 0.76
PDZD8-201ENST00000334464 IKQ13123 557 aaPredicted RBP19.81■□□□□ 0.76
PDZD8-201ENST00000334464 HFM1A2PYH4 1435 aa19.81■□□□□ 0.76
PDZD8-201ENST00000334464 PDILTQ8N807 584 aa19.8■□□□□ 0.76
PDZD8-201ENST00000334464 TRIM22Q8IYM9 498 aa19.8■□□□□ 0.76
PDZD8-201ENST00000334464 CASKIN1Q8WXD9 1431 aa19.8■□□□□ 0.76
PDZD8-201ENST00000334464 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
PDZD8-201ENST00000334464 TRIM5Q9C035 493 aa19.8■□□□□ 0.76
PDZD8-201ENST00000334464 NACAP1Q9BZK3 213 aa19.8■□□□□ 0.76
PDZD8-201ENST00000334464 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
PDZD8-201ENST00000334464 CDKL5O76039 1030 aa19.79■□□□□ 0.76
PDZD8-201ENST00000334464 TRIM21P19474 475 aaKnown RBP19.79■□□□□ 0.76
PDZD8-201ENST00000334464 AEBP1Q8IUX7 1158 aa19.79■□□□□ 0.76
PDZD8-201ENST00000334464 TMEM132AQ24JP5 1023 aa19.78■□□□□ 0.76
PDZD8-201ENST00000334464 SRCIN1Q9C0H9 1055 aa19.77■□□□□ 0.76
PDZD8-201ENST00000334464 PLEKHO1Q53GL0 409 aaPredicted RBP19.77■□□□□ 0.76
PDZD8-201ENST00000334464 GCC1Q96CN9 775 aa19.77■□□□□ 0.76
PDZD8-201ENST00000334464 NLRP2Q9NX02 1062 aa19.77■□□□□ 0.76
PDZD8-201ENST00000334464 EZRP15311 586 aaKnown RBP19.77■□□□□ 0.75
PDZD8-201ENST00000334464 LEKR1Q6ZMV7 388 aa19.76■□□□□ 0.75
PDZD8-201ENST00000334464 TSPY26PQ9H489 355 aa19.76■□□□□ 0.75
PDZD8-201ENST00000334464 KRT18P05783 430 aaKnown RBP19.76■□□□□ 0.75
PDZD8-201ENST00000334464 LNPKQ9C0E8 428 aa19.76■□□□□ 0.75
PDZD8-201ENST00000334464 CCT4P50991 539 aaKnown RBP19.76■□□□□ 0.75
PDZD8-201ENST00000334464 DNAI2Q9GZS0 605 aa19.76■□□□□ 0.75
PDZD8-201ENST00000334464 ZSCAN25Q6NSZ9 544 aa19.76■□□□□ 0.75
PDZD8-201ENST00000334464 NECTIN2Q92692 538 aa19.76■□□□□ 0.75
PDZD8-201ENST00000334464 PNISRQ8TF01 805 aaKnown RBP19.75■□□□□ 0.75
PDZD8-201ENST00000334464 SMC2O95347 1197 aa19.75■□□□□ 0.75
PDZD8-201ENST00000334464 CCDC192P0DO97 292 aa19.75■□□□□ 0.75
PDZD8-201ENST00000334464 GNAI2P04899 355 aa19.74■□□□□ 0.75
PDZD8-201ENST00000334464 CCDC158Q5M9N0 1113 aa19.74■□□□□ 0.75
PDZD8-201ENST00000334464 PAF1Q8N7H5 531 aa19.74■□□□□ 0.75
PDZD8-201ENST00000334464 CBFA2T2O43439 604 aa19.73■□□□□ 0.75
PDZD8-201ENST00000334464 SEPT7Q16181 437 aaKnown RBP19.73■□□□□ 0.75
PDZD8-201ENST00000334464 PODXL2Q9NZ53 605 aa19.73■□□□□ 0.75
PDZD8-201ENST00000334464 NCOA2Q15596 1464 aa19.73■□□□□ 0.75
PDZD8-201ENST00000334464 ERLIN1O75477 346 aa19.73■□□□□ 0.75
PDZD8-201ENST00000334464 STK38Q15208 465 aa19.73■□□□□ 0.75
PDZD8-201ENST00000334464 DAPK1P53355 1430 aa19.72■□□□□ 0.75
PDZD8-201ENST00000334464 EIF3JO75822 258 aaKnown RBP19.72■□□□□ 0.75
PDZD8-201ENST00000334464 PPFIBP1Q86W92 1011 aa19.71■□□□□ 0.75
PDZD8-201ENST00000334464 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
PDZD8-201ENST00000334464 PRKCSHP14314 528 aaPredicted RBP19.71■□□□□ 0.75
PDZD8-201ENST00000334464 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.7■□□□□ 0.74
PDZD8-201ENST00000334464 FYB1O15117 783 aa19.7■□□□□ 0.74
PDZD8-201ENST00000334464 INCENPQ9NQS7 918 aa19.7■□□□□ 0.74
PDZD8-201ENST00000334464 WDR33Q9C0J8 1336 aaKnown RBP19.7■□□□□ 0.74
PDZD8-201ENST00000334464 KIAA0754O94854 1291 aa19.7■□□□□ 0.74
PDZD8-201ENST00000334464 CYP46A1Q9Y6A2 500 aa19.7■□□□□ 0.74
PDZD8-201ENST00000334464 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
PDZD8-201ENST00000334464 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
PDZD8-201ENST00000334464 AXDND1Q5T1B0 1012 aaPredicted RBP19.69■□□□□ 0.74
PDZD8-201ENST00000334464 TTC39AQ5SRH9 613 aa19.68■□□□□ 0.74
PDZD8-201ENST00000334464 ZNF428Q96B54 188 aa19.68■□□□□ 0.74
PDZD8-201ENST00000334464 NOL7Q9UMY1 257 aaKnown RBP19.68■□□□□ 0.74
PDZD8-201ENST00000334464 HMOX1P09601 288 aa19.68■□□□□ 0.74
PDZD8-201ENST00000334464 AIMP1Q12904 312 aaKnown RBP19.68■□□□□ 0.74
PDZD8-201ENST00000334464 WASF1Q92558 559 aa19.68■□□□□ 0.74
PDZD8-201ENST00000334464 FBXO3Q9UK99 471 aa19.68■□□□□ 0.74
PDZD8-201ENST00000334464 CFAP45Q9UL16 551 aa19.68■□□□□ 0.74
PDZD8-201ENST00000334464 GBP2P32456 591 aaPredicted RBP19.68■□□□□ 0.74
PDZD8-201ENST00000334464 FOSBP53539 338 aa19.67■□□□□ 0.74
PDZD8-201ENST00000334464 NLRP6P59044 892 aa19.67■□□□□ 0.74
PDZD8-201ENST00000334464 ABTB2Q8N961 1025 aa19.67■□□□□ 0.74
PDZD8-201ENST00000334464 SURF6O75683 361 aaKnown RBP19.67■□□□□ 0.74
PDZD8-201ENST00000334464 KRT32Q14532 448 aa19.67■□□□□ 0.74
PDZD8-201ENST00000334464 BMP2KQ9NSY1 1161 aaPredicted RBP19.67■□□□□ 0.74
PDZD8-201ENST00000334464 CTNNA3Q9UI47 895 aa19.67■□□□□ 0.74
PDZD8-201ENST00000334464 SLC4A3P48751 1232 aa19.66■□□□□ 0.74
PDZD8-201ENST00000334464 KRT85P78386 507 aa19.66■□□□□ 0.74
PDZD8-201ENST00000334464 DEF6Q9H4E7 631 aa19.66■□□□□ 0.74
PDZD8-201ENST00000334464 NEK4P51957 841 aa19.65■□□□□ 0.74
PDZD8-201ENST00000334464 CUL7Q14999 1698 aa19.65■□□□□ 0.74
PDZD8-201ENST00000334464 ZNF287Q9HBT7 754 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms