RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 SSH1Q8WYL5 1049 aa14.83□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 ZFYVE9O95405 1425 aa14.82□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 KIF16BQ96L93 1317 aa14.82□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 FRAT2O75474 233 aaPredicted RBP14.82□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 SEC24BO95487 1268 aa14.82□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 TRIM27P14373 513 aa14.82□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 MLECQ14165 292 aa14.81□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 YEATS2Q9ULM3 1422 aa14.81□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 IL16Q14005 1332 aa14.81□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 FCHSD2O94868 740 aa14.8□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 CALD1Q05682 793 aaKnown RBP14.8□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 FAM69CQ0P6D2 419 aa14.8□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 PLEKHF1Q96S99 279 aa14.8□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 PRKAR2BP31323 418 aa14.79□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 DIP2CQ9Y2E4 1556 aa14.79□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 CHMP4BQ9H444 224 aaKnown RBP14.79□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 MFAP1P55081 439 aaKnown RBP14.78□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 WAPLQ7Z5K2 1190 aa14.78□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 HMOX1P09601 288 aa14.77□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 TMEM57Q8N5G2 664 aa14.77□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 USP19O94966 1318 aa14.76□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 HDAC1Q13547 482 aaPredicted RBP14.76□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 RTN4Q9NQC3 1192 aaKnown RBP14.75□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 PIK3C2BO00750 1634 aa14.75□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 ALDH1L2Q3SY69 923 aa14.75□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 ZNF428Q96B54 188 aa14.74□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 SIGLEC1Q9BZZ2 1709 aa14.74□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 FBLN1P23142 703 aa14.74□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 C22orf23Q9BZE7 217 aa14.74□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 HDGFP51858 240 aaKnown RBP14.74□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 SPRYD3Q8NCJ5 442 aa14.74□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 PTPRMP28827 1452 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 COG3Q96JB2 828 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 POLKQ9UBT6 870 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 ELL2O00472 640 aaPredicted RBP14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 GNAI1P63096 354 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 LMOD3Q0VAK6 560 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 NFE2L2Q16236 605 aa14.73□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 MED14O60244 1454 aa14.71□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.71□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 ZBTB40Q9NUA8 1239 aa14.71□□□□□ -0.05
CSPG4P4Y-201ENST00000333235 TBC1D2Q9BYX2 928 aa14.7□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 EMILIN1Q9Y6C2 1016 aa14.7□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 THUMPD2Q9BTF0 503 aaKnown RBP14.7□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 WASLO00401 505 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 ADGRB2O60241 1585 aa14.69□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 PNPLA6Q8IY17 1366 aa14.69□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 ANKRD45Q5TZF3 282 aa14.69□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 NME9Q86XW9 330 aa14.69□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 RIMS2Q9UQ26 1411 aa14.68□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 PHACTR3Q96KR7 559 aa14.68□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 BRPF3Q9ULD4 1205 aa14.68□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 TMEM131LA2VDJ0 1609 aa14.68□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 HSP90AA1P07900 732 aaKnown RBP14.67□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 CHD1LQ86WJ1 897 aa14.67□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 COL3A1P02461 1466 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 PREX1Q8TCU6 1659 aa14.67□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 TWISTNBQ3B726 338 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 ARHGEF40Q8TER5 1519 aa14.66□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 CD163L1Q9NR16 1453 aa14.66□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 RRS1Q15050 365 aaKnown RBP14.66□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 PPIP5K1Q6PFW1 1433 aa14.65□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 RICTORQ6R327 1708 aa14.65□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 NUCB1Q02818 461 aa14.65□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 GCC1Q96CN9 775 aa14.65□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 API5Q9BZZ5 524 aaKnown RBP14.65□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 C1orf115Q9H7X2 142 aa14.65□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 ATP7BP35670 1465 aa14.65□□□□□ -0.06
CSPG4P4Y-201ENST00000333235 VAMP4O75379 141 aa14.64□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 NLRP1Q9C000 1473 aa14.64□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 EDC4Q6P2E9 1401 aaKnown RBP14.64□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 HSP90AB1P08238 724 aaKnown RBP14.63□□□□□ -0.07
CSPG4P4Y-201ENST00000333235 IL13P35225 146 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms