RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 SETQ01105 290 aaPredicted RBP19.09■□□□□ 0.65
SLIT3-201ENST00000332966 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
SLIT3-201ENST00000332966 NOM1Q5C9Z4 860 aaKnown RBP19.09■□□□□ 0.65
SLIT3-201ENST00000332966 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
SLIT3-201ENST00000332966 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
SLIT3-201ENST00000332966 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.65
SLIT3-201ENST00000332966 GORABQ5T7V8 394 aa19.08■□□□□ 0.65
SLIT3-201ENST00000332966 CWC15Q9P013 229 aaKnown RBP19.08■□□□□ 0.64
SLIT3-201ENST00000332966 BMP2KLQ5H9B9 411 aa19.08■□□□□ 0.64
SLIT3-201ENST00000332966 CNTROBQ8N137 903 aa19.07■□□□□ 0.64
SLIT3-201ENST00000332966 SSH1Q8WYL5 1049 aa19.07■□□□□ 0.64
SLIT3-201ENST00000332966 TMEM132EQ6IEE7 984 aa19.07■□□□□ 0.64
SLIT3-201ENST00000332966 TPM1P09493 284 aa19.07■□□□□ 0.64
SLIT3-201ENST00000332966 PSMA5P28066 241 aa19.07■□□□□ 0.64
SLIT3-201ENST00000332966 AEBP1Q8IUX7 1158 aa19.06■□□□□ 0.64
SLIT3-201ENST00000332966 PRDM10Q9NQV6 1147 aa19.06■□□□□ 0.64
SLIT3-201ENST00000332966 TMPOP42166 694 aaKnown RBP19.06■□□□□ 0.64
SLIT3-201ENST00000332966 TSPYL4Q9UJ04 414 aa19.06■□□□□ 0.64
SLIT3-201ENST00000332966 RPAP2Q8IXW5 612 aaPredicted RBP19.06■□□□□ 0.64
SLIT3-201ENST00000332966 CAMSAP2Q08AD1 1489 aa19.05■□□□□ 0.64
SLIT3-201ENST00000332966 CUL7Q14999 1698 aa19.05■□□□□ 0.64
SLIT3-201ENST00000332966 SNX21Q969T3 373 aa19.05■□□□□ 0.64
SLIT3-201ENST00000332966 ALDH1L2Q3SY69 923 aa19.05■□□□□ 0.64
SLIT3-201ENST00000332966 CBX1P83916 185 aa19.05■□□□□ 0.64
SLIT3-201ENST00000332966 C9orf78Q9NZ63 289 aaPredicted RBP19.05■□□□□ 0.64
SLIT3-201ENST00000332966 UBTFL1P0CB47 393 aaPredicted RBP19.04■□□□□ 0.64
SLIT3-201ENST00000332966 BCL11BQ9C0K0 894 aaPredicted RBP19.04■□□□□ 0.64
SLIT3-201ENST00000332966 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
SLIT3-201ENST00000332966 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
SLIT3-201ENST00000332966 PCDHB15Q9Y5E8 787 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 ARHGAP5Q13017 1502 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 HDAC1Q13547 482 aaPredicted RBP19.03■□□□□ 0.64
SLIT3-201ENST00000332966 HS1BP3Q53T59 392 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 CCP110O43303 1012 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 GNAI2P04899 355 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 OFD1O75665 1012 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 MLECQ14165 292 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 PRIMPOLQ96LW4 560 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 ACBD3Q9H3P7 528 aa19.03■□□□□ 0.64
SLIT3-201ENST00000332966 DHX8Q14562 1220 aaKnown RBP19.02■□□□□ 0.64
SLIT3-201ENST00000332966 SDF4Q9BRK5 362 aa19.02■□□□□ 0.64
SLIT3-201ENST00000332966 ABCC11Q96J66 1382 aa19.02■□□□□ 0.64
SLIT3-201ENST00000332966 TRIM27P14373 513 aa19.02■□□□□ 0.64
SLIT3-201ENST00000332966 KRT85P78386 507 aa19.02■□□□□ 0.64
SLIT3-201ENST00000332966 NSD3Q9BZ95 1437 aa19.02■□□□□ 0.64
SLIT3-201ENST00000332966 NGDNQ8NEJ9 315 aaKnown RBP19.02■□□□□ 0.64
SLIT3-201ENST00000332966 TNMDQ9H2S6 317 aa19.02■□□□□ 0.64
SLIT3-201ENST00000332966 A0A0G2JS52 829 aa19.01■□□□□ 0.63
SLIT3-201ENST00000332966 TSR1Q2NL82 804 aaKnown RBP19.01■□□□□ 0.63
SLIT3-201ENST00000332966 NOC3LQ8WTT2 800 aaKnown RBP19.01■□□□□ 0.63
SLIT3-201ENST00000332966 ZSCAN23Q3MJ62 389 aa19.01■□□□□ 0.63
SLIT3-201ENST00000332966 HSP90B2PQ58FF3 399 aa19.01■□□□□ 0.63
SLIT3-201ENST00000332966 CCDC70Q6NSX1 233 aa19.01■□□□□ 0.63
SLIT3-201ENST00000332966 CPLX2Q6PUV4 134 aaKnown RBP19.01■□□□□ 0.63
SLIT3-201ENST00000332966 KINO60870 393 aaKnown RBP19.01■□□□□ 0.63
SLIT3-201ENST00000332966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.01■□□□□ 0.63
SLIT3-201ENST00000332966 CCDC183Q5T5S1 534 aa19.01■□□□□ 0.63
SLIT3-201ENST00000332966 LRRCC1Q9C099 1032 aa19.01■□□□□ 0.63
SLIT3-201ENST00000332966 SRCIN1Q9C0H9 1055 aa19.01■□□□□ 0.63
SLIT3-201ENST00000332966 SYNJ2O15056 1496 aa19■□□□□ 0.63
SLIT3-201ENST00000332966 G3BP1Q13283 466 aaKnown RBP eCLIP19■□□□□ 0.63
SLIT3-201ENST00000332966 NECTIN2Q92692 538 aa19■□□□□ 0.63
SLIT3-201ENST00000332966 HOOK1Q9UJC3 728 aaKnown RBP19■□□□□ 0.63
SLIT3-201ENST00000332966 TBC1D9Q6ZT07 1266 aa19■□□□□ 0.63
SLIT3-201ENST00000332966 CREBRFQ8IUR6 639 aa19■□□□□ 0.63
SLIT3-201ENST00000332966 SURF6O75683 361 aaKnown RBP18.99■□□□□ 0.63
SLIT3-201ENST00000332966 FCHSD2O94868 740 aa18.99■□□□□ 0.63
SLIT3-201ENST00000332966 PDIA4P13667 645 aaKnown RBP18.99■□□□□ 0.63
SLIT3-201ENST00000332966 CCT4P50991 539 aaKnown RBP18.99■□□□□ 0.63
SLIT3-201ENST00000332966 SEC24BO95487 1268 aa18.99■□□□□ 0.63
SLIT3-201ENST00000332966 FBXW7Q969H0 707 aa18.99■□□□□ 0.63
SLIT3-201ENST00000332966 SMC5Q8IY18 1101 aa18.99■□□□□ 0.63
SLIT3-201ENST00000332966 UGGT2Q9NYU1 1516 aa18.99■□□□□ 0.63
SLIT3-201ENST00000332966 EIF2S2P20042 333 aaKnown RBP18.99■□□□□ 0.63
SLIT3-201ENST00000332966 ZKSCAN5Q9Y2L8 839 aa18.98■□□□□ 0.63
SLIT3-201ENST00000332966 PLEKHH1Q9ULM0 1364 aa18.98■□□□□ 0.63
SLIT3-201ENST00000332966 CPLX1O14810 134 aa18.98■□□□□ 0.63
SLIT3-201ENST00000332966 CLASRPQ8N2M8 674 aaKnown RBP18.98■□□□□ 0.63
SLIT3-201ENST00000332966 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
SLIT3-201ENST00000332966 CYP46A1Q9Y6A2 500 aa18.98■□□□□ 0.63
SLIT3-201ENST00000332966 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
SLIT3-201ENST00000332966 NUP62CLQ9H1M0 184 aa18.98■□□□□ 0.63
SLIT3-201ENST00000332966 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
SLIT3-201ENST00000332966 RAB3GAP1Q15042 981 aa18.97■□□□□ 0.63
SLIT3-201ENST00000332966 UVSSAQ2YD98 709 aa18.97■□□□□ 0.63
SLIT3-201ENST00000332966 LRRFIP1Q32MZ4 808 aaKnown RBP18.97■□□□□ 0.63
SLIT3-201ENST00000332966 LRSAM1Q6UWE0 723 aa18.97■□□□□ 0.63
SLIT3-201ENST00000332966 NPHP1O15259 732 aa18.96■□□□□ 0.63
SLIT3-201ENST00000332966 SYNE3Q6ZMZ3 975 aa18.96■□□□□ 0.63
SLIT3-201ENST00000332966 USP25Q9UHP3 1055 aa18.96■□□□□ 0.63
SLIT3-201ENST00000332966 TEFQ10587 303 aa18.96■□□□□ 0.63
SLIT3-201ENST00000332966 ZSCAN31Q96LW9 406 aaPredicted RBP18.96■□□□□ 0.63
SLIT3-201ENST00000332966 ZHX1Q9UKY1 873 aaPredicted RBP18.96■□□□□ 0.63
SLIT3-201ENST00000332966 CFAP43Q8NDM7 1665 aa18.96■□□□□ 0.63
SLIT3-201ENST00000332966 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
SLIT3-201ENST00000332966 HIP1O00291 1037 aa18.95■□□□□ 0.62
SLIT3-201ENST00000332966 NUCB1Q02818 461 aa18.95■□□□□ 0.62
SLIT3-201ENST00000332966 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
SLIT3-201ENST00000332966 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms