RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 CCDC27Q2M243 656 aa11.91□□□□□ -0.5
SIMC1-201ENST00000332772 TOPAZ1Q8N9V7 1692 aa11.91□□□□□ -0.5
SIMC1-201ENST00000332772 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.5
SIMC1-201ENST00000332772 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
SIMC1-201ENST00000332772 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
SIMC1-201ENST00000332772 COL3A1P02461 1466 aaPredicted RBP11.9□□□□□ -0.5
SIMC1-201ENST00000332772 IQSEC2Q5JU85 1478 aa11.9□□□□□ -0.5
SIMC1-201ENST00000332772 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
SIMC1-201ENST00000332772 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
SIMC1-201ENST00000332772 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
SIMC1-201ENST00000332772 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.89□□□□□ -0.51
SIMC1-201ENST00000332772 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
SIMC1-201ENST00000332772 E9PSI1 815 aa11.89□□□□□ -0.51
SIMC1-201ENST00000332772 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
SIMC1-201ENST00000332772 CDCA7LQ96GN5 454 aa11.89□□□□□ -0.51
SIMC1-201ENST00000332772 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
SIMC1-201ENST00000332772 RIMS1Q86UR5 1692 aaKnown RBP11.88□□□□□ -0.51
SIMC1-201ENST00000332772 APAF1O14727 1248 aa11.88□□□□□ -0.51
SIMC1-201ENST00000332772 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
SIMC1-201ENST00000332772 IRX6P78412 446 aaPredicted RBP11.87□□□□□ -0.51
SIMC1-201ENST00000332772 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
SIMC1-201ENST00000332772 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
SIMC1-201ENST00000332772 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
SIMC1-201ENST00000332772 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
SIMC1-201ENST00000332772 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
SIMC1-201ENST00000332772 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
SIMC1-201ENST00000332772 GGNBP2Q9H3C7 697 aa11.86□□□□□ -0.51
SIMC1-201ENST00000332772 MAP2P11137 1827 aaKnown RBP11.85□□□□□ -0.51
SIMC1-201ENST00000332772 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
SIMC1-201ENST00000332772 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
SIMC1-201ENST00000332772 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
SIMC1-201ENST00000332772 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
SIMC1-201ENST00000332772 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.85□□□□□ -0.51
SIMC1-201ENST00000332772 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
SIMC1-201ENST00000332772 ANKARQ7Z5J8 1434 aa11.83□□□□□ -0.52
SIMC1-201ENST00000332772 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
SIMC1-201ENST00000332772 TCP11L2Q8N4U5 519 aa11.83□□□□□ -0.52
SIMC1-201ENST00000332772 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
SIMC1-201ENST00000332772 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
SIMC1-201ENST00000332772 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
SIMC1-201ENST00000332772 CHD2O14647 1828 aaKnown RBP11.82□□□□□ -0.52
SIMC1-201ENST00000332772 U2AF1L5P0DN76 240 aaPredicted RBP11.82□□□□□ -0.52
SIMC1-201ENST00000332772 U2AF1Q01081 240 aaKnown RBP eCLIP11.82□□□□□ -0.52
SIMC1-201ENST00000332772 PRR36Q9H6K5 1346 aa11.82□□□□□ -0.52
SIMC1-201ENST00000332772 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
SIMC1-201ENST00000332772 FCHSD2O94868 740 aa11.81□□□□□ -0.52
SIMC1-201ENST00000332772 ANKLE2Q86XL3 938 aa11.81□□□□□ -0.52
SIMC1-201ENST00000332772 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
SIMC1-201ENST00000332772 NALCNQ8IZF0 1738 aa11.81□□□□□ -0.52
SIMC1-201ENST00000332772 CT47B1P0C2W7 299 aaPredicted RBP11.8□□□□□ -0.52
SIMC1-201ENST00000332772 COG3Q96JB2 828 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 POLKQ9UBT6 870 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 TTC21AQ8NDW8 1320 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 SSH2Q76I76 1423 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 IL16Q14005 1332 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 USP6P35125 1406 aa11.8□□□□□ -0.52
SIMC1-201ENST00000332772 LRRC7Q96NW7 1537 aa11.79□□□□□ -0.52
SIMC1-201ENST00000332772 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
SIMC1-201ENST00000332772 B4GALNT3Q6L9W6 998 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.52
SIMC1-201ENST00000332772 MYH16Q9H6N6 1097 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 USP54Q70EL1 1684 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 ACEP12821 1306 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 TTC21BQ7Z4L5 1316 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 MAPK8IP3Q9UPT6 1336 aa11.78□□□□□ -0.52
SIMC1-201ENST00000332772 USP31Q70CQ4 1352 aa11.77□□□□□ -0.52
SIMC1-201ENST00000332772 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
SIMC1-201ENST00000332772 NME9Q86XW9 330 aa11.76□□□□□ -0.53
SIMC1-201ENST00000332772 U2SURPO15042 1029 aaKnown RBP11.76□□□□□ -0.53
SIMC1-201ENST00000332772 NEFMP07197 916 aa11.76□□□□□ -0.53
SIMC1-201ENST00000332772 AAMPQ13685 434 aa11.76□□□□□ -0.53
SIMC1-201ENST00000332772 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
SIMC1-201ENST00000332772 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
SIMC1-201ENST00000332772 IL13P35225 146 aa11.74□□□□□ -0.53
SIMC1-201ENST00000332772 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
SIMC1-201ENST00000332772 KIF24Q5T7B8 1368 aa11.74□□□□□ -0.53
SIMC1-201ENST00000332772 RGPD8O14715 1765 aaPredicted RBP11.74□□□□□ -0.53
SIMC1-201ENST00000332772 ABCB7O75027 752 aa11.74□□□□□ -0.53
SIMC1-201ENST00000332772 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
SIMC1-201ENST00000332772 NWD1Q149M9 1564 aa11.73□□□□□ -0.53
SIMC1-201ENST00000332772 NPHP4O75161 1426 aaPredicted RBP11.73□□□□□ -0.53
SIMC1-201ENST00000332772 KCNA6P17658 529 aa11.73□□□□□ -0.53
SIMC1-201ENST00000332772 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
SIMC1-201ENST00000332772 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
SIMC1-201ENST00000332772 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
SIMC1-201ENST00000332772 ADGRL3Q9HAR2 1447 aa11.71□□□□□ -0.53
SIMC1-201ENST00000332772 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.53
SIMC1-201ENST00000332772 NEUROD2Q15784 382 aa11.71□□□□□ -0.53
SIMC1-201ENST00000332772 ZNF428Q96B54 188 aa11.71□□□□□ -0.53
SIMC1-201ENST00000332772 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
SIMC1-201ENST00000332772 RRP7AQ9Y3A4 280 aaKnown RBP11.71□□□□□ -0.53
SIMC1-201ENST00000332772 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
SIMC1-201ENST00000332772 PLIN1O60240 522 aa11.7□□□□□ -0.54
SIMC1-201ENST00000332772 RARSP54136 660 aaKnown RBP11.7□□□□□ -0.54
SIMC1-201ENST00000332772 RIPK4P57078 832 aa11.7□□□□□ -0.54
SIMC1-201ENST00000332772 RGPD1P0DJD0 1748 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms