RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 ELL2O00472 640 aaPredicted RBP23.49■■□□□ 1.35
LYSMD4-201ENST00000332728 ZFYVE9O95405 1425 aa23.49■■□□□ 1.35
LYSMD4-201ENST00000332728 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
LYSMD4-201ENST00000332728 NUDT16Q96DE0 195 aaKnown RBP23.47■■□□□ 1.35
LYSMD4-201ENST00000332728 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-201ENST00000332728 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-201ENST00000332728 WASLO00401 505 aaPredicted RBP23.46■■□□□ 1.35
LYSMD4-201ENST00000332728 PLEKHG5O94827 1062 aa23.46■■□□□ 1.35
LYSMD4-201ENST00000332728 LTKP29376 864 aa23.46■■□□□ 1.35
LYSMD4-201ENST00000332728 POLKQ9UBT6 870 aa23.46■■□□□ 1.35
LYSMD4-201ENST00000332728 TRIM35Q9UPQ4 493 aa23.46■■□□□ 1.35
LYSMD4-201ENST00000332728 PHACTR3Q96KR7 559 aa23.46■■□□□ 1.35
LYSMD4-201ENST00000332728 PLEKHF1Q96S99 279 aa23.45■■□□□ 1.34
LYSMD4-201ENST00000332728 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
LYSMD4-201ENST00000332728 SMC4Q9NTJ3 1288 aa23.44■■□□□ 1.34
LYSMD4-201ENST00000332728 ARHGEF40Q8TER5 1519 aa23.42■■□□□ 1.34
LYSMD4-201ENST00000332728 PMFBP1Q8TBY8 1022 aa23.42■■□□□ 1.34
LYSMD4-201ENST00000332728 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
LYSMD4-201ENST00000332728 WDR63Q8IWG1 891 aa23.41■■□□□ 1.34
LYSMD4-201ENST00000332728 PUS7Q96PZ0 661 aaKnown RBP23.41■■□□□ 1.34
LYSMD4-201ENST00000332728 PPIP5K1Q6PFW1 1433 aa23.41■■□□□ 1.34
LYSMD4-201ENST00000332728 MYH16Q9H6N6 1097 aa23.41■■□□□ 1.34
LYSMD4-201ENST00000332728 DCTN1Q14203 1278 aa23.4■■□□□ 1.34
LYSMD4-201ENST00000332728 FTSJ3Q8IY81 847 aaKnown RBP23.4■■□□□ 1.34
LYSMD4-201ENST00000332728 IQSEC2Q5JU85 1478 aa23.4■■□□□ 1.34
LYSMD4-201ENST00000332728 NSD2O96028 1365 aa23.39■■□□□ 1.34
LYSMD4-201ENST00000332728 TNRQ92752 1358 aa23.39■■□□□ 1.34
LYSMD4-201ENST00000332728 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.34
LYSMD4-201ENST00000332728 PRR36Q9H6K5 1346 aa23.39■■□□□ 1.33
LYSMD4-201ENST00000332728 FAM83GA6ND36 823 aa23.38■■□□□ 1.33
LYSMD4-201ENST00000332728 SSH1Q8WYL5 1049 aa23.38■■□□□ 1.33
LYSMD4-201ENST00000332728 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
LYSMD4-201ENST00000332728 MS4A1P11836 297 aa23.36■■□□□ 1.33
LYSMD4-201ENST00000332728 MYT1Q01538 1121 aa23.36■■□□□ 1.33
LYSMD4-201ENST00000332728 NUTM2GQ5VZR2 741 aa23.36■■□□□ 1.33
LYSMD4-201ENST00000332728 ROBO2Q9HCK4 1378 aa23.35■■□□□ 1.33
LYSMD4-201ENST00000332728 ITPRIPQ8IWB1 547 aa23.35■■□□□ 1.33
LYSMD4-201ENST00000332728 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
LYSMD4-201ENST00000332728 COG3Q96JB2 828 aa23.35■■□□□ 1.33
LYSMD4-201ENST00000332728 KIF13AQ9H1H9 1805 aa23.35■■□□□ 1.33
LYSMD4-201ENST00000332728 PDE3AQ14432 1141 aa23.34■■□□□ 1.33
LYSMD4-201ENST00000332728 NOB1Q9ULX3 412 aaKnown RBP23.34■■□□□ 1.33
LYSMD4-201ENST00000332728 PPP6R1Q9UPN7 881 aa23.34■■□□□ 1.33
LYSMD4-201ENST00000332728 CCDC61Q9Y6R9 512 aa23.34■■□□□ 1.33
LYSMD4-201ENST00000332728 C8orf34Q49A92 452 aa23.33■■□□□ 1.33
LYSMD4-201ENST00000332728 AEBP1Q8IUX7 1158 aa23.33■■□□□ 1.33
LYSMD4-201ENST00000332728 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
LYSMD4-201ENST00000332728 NGEFQ8N5V2 710 aa23.32■■□□□ 1.32
LYSMD4-201ENST00000332728 RSPH6AQ9H0K4 717 aa23.32■■□□□ 1.32
LYSMD4-201ENST00000332728 NINLQ9Y2I6 1382 aa23.31■■□□□ 1.32
LYSMD4-201ENST00000332728 AGLP35573 1532 aa23.31■■□□□ 1.32
LYSMD4-201ENST00000332728 NEFMP07197 916 aa23.31■■□□□ 1.32
LYSMD4-201ENST00000332728 TRIM27P14373 513 aa23.31■■□□□ 1.32
LYSMD4-201ENST00000332728 CCDC27Q2M243 656 aa23.31■■□□□ 1.32
LYSMD4-201ENST00000332728 TSPYL6Q8N831 410 aa23.3■■□□□ 1.32
LYSMD4-201ENST00000332728 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
LYSMD4-201ENST00000332728 SEC24BO95487 1268 aa23.3■■□□□ 1.32
LYSMD4-201ENST00000332728 ZKSCAN2Q63HK3 967 aa23.3■■□□□ 1.32
LYSMD4-201ENST00000332728 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
LYSMD4-201ENST00000332728 DZIP1LQ8IYY4 767 aaKnown RBP23.29■■□□□ 1.32
LYSMD4-201ENST00000332728 TMEM2Q9UHN6 1383 aa23.29■■□□□ 1.32
LYSMD4-201ENST00000332728 FAM161AQ3B820 660 aa23.28■■□□□ 1.32
LYSMD4-201ENST00000332728 ACEP12821 1306 aa23.28■■□□□ 1.32
LYSMD4-201ENST00000332728 CPS1P31327 1500 aa23.28■■□□□ 1.32
LYSMD4-201ENST00000332728 HDGFP51858 240 aaKnown RBP23.27■■□□□ 1.32
LYSMD4-201ENST00000332728 AMOTL2Q9Y2J4 779 aa23.27■■□□□ 1.32
LYSMD4-201ENST00000332728 C1orf115Q9H7X2 142 aa23.26■■□□□ 1.31
LYSMD4-201ENST00000332728 TMEM57Q8N5G2 664 aa23.26■■□□□ 1.31
LYSMD4-201ENST00000332728 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
LYSMD4-201ENST00000332728 PDZRN3Q9UPQ7 1066 aa23.25■■□□□ 1.31
LYSMD4-201ENST00000332728 FCHSD2O94868 740 aa23.25■■□□□ 1.31
LYSMD4-201ENST00000332728 IL13P35225 146 aa23.25■■□□□ 1.31
LYSMD4-201ENST00000332728 HSP90AB2PQ58FF8 381 aa23.25■■□□□ 1.31
LYSMD4-201ENST00000332728 NRXN3Q9Y4C0 1643 aa23.25■■□□□ 1.31
LYSMD4-201ENST00000332728 MVPQ14764 893 aaKnown RBP23.24■■□□□ 1.31
LYSMD4-201ENST00000332728 SULT6B1Q6IMI4 303 aa23.24■■□□□ 1.31
LYSMD4-201ENST00000332728 C14orf37Q86TY3 774 aa23.23■■□□□ 1.31
LYSMD4-201ENST00000332728 EID1Q9Y6B2 187 aa23.23■■□□□ 1.31
LYSMD4-201ENST00000332728 MAP2P11137 1827 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-201ENST00000332728 MIS18AQ9NYP9 233 aa23.22■■□□□ 1.31
LYSMD4-201ENST00000332728 LRRC7Q96NW7 1537 aa23.21■■□□□ 1.31
LYSMD4-201ENST00000332728 NFE2L2Q16236 605 aa23.21■■□□□ 1.31
LYSMD4-201ENST00000332728 MCM10Q7L590 875 aa23.21■■□□□ 1.31
LYSMD4-201ENST00000332728 ZBTB7CA1YPR0 619 aa23.2■■□□□ 1.3
LYSMD4-201ENST00000332728 NGDNQ8NEJ9 315 aaKnown RBP23.2■■□□□ 1.3
LYSMD4-201ENST00000332728 ATF7IPQ6VMQ6 1270 aa23.2■■□□□ 1.3
LYSMD4-201ENST00000332728 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
LYSMD4-201ENST00000332728 LTV1Q96GA3 475 aaPredicted RBP23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 MBIPQ9NS73 344 aa23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 TTC21BQ7Z4L5 1316 aa23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 SETD1AO15047 1707 aaKnown RBP23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 EDC4Q6P2E9 1401 aaKnown RBP23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 ADAMTS13Q76LX8 1427 aa23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
LYSMD4-201ENST00000332728 REREQ9P2R6 1566 aa23.17■■□□□ 1.3
LYSMD4-201ENST00000332728 C8orf58Q8NAV2 365 aa23.17■■□□□ 1.3
LYSMD4-201ENST00000332728 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
LYSMD4-201ENST00000332728 FOXO3O43524 673 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms