RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
NSMCE3-201ENST00000332303 WDR63Q8IWG1 891 aa19.91■□□□□ 0.78
NSMCE3-201ENST00000332303 CABP1Q9NZU7 370 aa19.91■□□□□ 0.78
NSMCE3-201ENST00000332303 SLC4A2P04920 1241 aa19.91■□□□□ 0.78
NSMCE3-201ENST00000332303 TSR2Q969E8 191 aaKnown RBP19.9■□□□□ 0.78
NSMCE3-201ENST00000332303 TATP17735 454 aaPredicted RBP19.9■□□□□ 0.78
NSMCE3-201ENST00000332303 IFT57Q9NWB7 429 aa19.9■□□□□ 0.78
NSMCE3-201ENST00000332303 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.78
NSMCE3-201ENST00000332303 CCT4P50991 539 aaKnown RBP19.89■□□□□ 0.78
NSMCE3-201ENST00000332303 CDK19Q9BWU1 502 aa19.89■□□□□ 0.78
NSMCE3-201ENST00000332303 OLFM4Q6UX06 510 aa19.89■□□□□ 0.77
NSMCE3-201ENST00000332303 NOB1Q9ULX3 412 aaKnown RBP19.88■□□□□ 0.77
NSMCE3-201ENST00000332303 FYB1O15117 783 aa19.88■□□□□ 0.77
NSMCE3-201ENST00000332303 NASPP49321 788 aaPredicted RBP19.88■□□□□ 0.77
NSMCE3-201ENST00000332303 DNAJC2Q99543 621 aaKnown RBP19.88■□□□□ 0.77
NSMCE3-201ENST00000332303 SMG6Q86US8 1419 aaKnown RBP19.87■□□□□ 0.77
NSMCE3-201ENST00000332303 ATF7IPQ6VMQ6 1270 aa19.87■□□□□ 0.77
NSMCE3-201ENST00000332303 TRAK2O60296 914 aa19.87■□□□□ 0.77
NSMCE3-201ENST00000332303 BCAR3O75815 825 aa19.87■□□□□ 0.77
NSMCE3-201ENST00000332303 KIF6Q6ZMV9 814 aa19.87■□□□□ 0.77
NSMCE3-201ENST00000332303 SRCIN1Q9C0H9 1055 aa19.86■□□□□ 0.77
NSMCE3-201ENST00000332303 C1orf115Q9H7X2 142 aa19.86■□□□□ 0.77
NSMCE3-201ENST00000332303 KINO60870 393 aaKnown RBP19.86■□□□□ 0.77
NSMCE3-201ENST00000332303 MNS1Q8NEH6 495 aa19.86■□□□□ 0.77
NSMCE3-201ENST00000332303 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
NSMCE3-201ENST00000332303 RPGRIP1LQ68CZ1 1315 aa19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 RNF214Q8ND24 703 aa19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 FAM13BQ9NYF5 915 aa19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 LETM1O95202 739 aaPredicted RBP19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 ZNF428Q96B54 188 aa19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 ANKRD30BQ9BXX2 1392 aa19.85■□□□□ 0.77
NSMCE3-201ENST00000332303 OFD1O75665 1012 aa19.84■□□□□ 0.77
NSMCE3-201ENST00000332303 ARGLU1Q9NWB6 273 aaPredicted RBP19.84■□□□□ 0.77
NSMCE3-201ENST00000332303 TEX35Q5T0J7 233 aa19.83■□□□□ 0.77
NSMCE3-201ENST00000332303 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.77
NSMCE3-201ENST00000332303 CCDC158Q5M9N0 1113 aa19.83■□□□□ 0.76
NSMCE3-201ENST00000332303 SAMD1Q6SPF0 538 aaPredicted RBP19.83■□□□□ 0.76
NSMCE3-201ENST00000332303 PRXQ9BXM0 1461 aa19.83■□□□□ 0.76
NSMCE3-201ENST00000332303 FAM177BA6PVY3 158 aa19.83■□□□□ 0.76
NSMCE3-201ENST00000332303 CAVIN1Q6NZI2 390 aaKnown RBP19.83■□□□□ 0.76
NSMCE3-201ENST00000332303 LRRCC1Q9C099 1032 aa19.83■□□□□ 0.76
NSMCE3-201ENST00000332303 ATAD2Q6PL18 1390 aa19.83■□□□□ 0.76
NSMCE3-201ENST00000332303 SETQ01105 290 aaPredicted RBP19.82■□□□□ 0.76
NSMCE3-201ENST00000332303 CCDC39Q9UFE4 941 aa19.82■□□□□ 0.76
NSMCE3-201ENST00000332303 SLC3A2P08195 630 aaKnown RBP19.81■□□□□ 0.76
NSMCE3-201ENST00000332303 ATP2B1P20020 1258 aa19.81■□□□□ 0.76
NSMCE3-201ENST00000332303 NAP1L1P55209 391 aaKnown RBP19.81■□□□□ 0.76
NSMCE3-201ENST00000332303 RTEL1-TNFRSF6BF6WH68 1400 aa19.81■□□□□ 0.76
NSMCE3-201ENST00000332303 MVPQ14764 893 aaKnown RBP19.81■□□□□ 0.76
NSMCE3-201ENST00000332303 TRIM5Q9C035 493 aa19.81■□□□□ 0.76
NSMCE3-201ENST00000332303 CNNM1Q9NRU3 951 aa19.81■□□□□ 0.76
NSMCE3-201ENST00000332303 STRN4Q9NRL3 753 aa19.8■□□□□ 0.76
NSMCE3-201ENST00000332303 CYP46A1Q9Y6A2 500 aa19.8■□□□□ 0.76
NSMCE3-201ENST00000332303 ERBINQ96RT1 1412 aa19.8■□□□□ 0.76
NSMCE3-201ENST00000332303 FCHSD2O94868 740 aa19.8■□□□□ 0.76
NSMCE3-201ENST00000332303 CWC22Q9HCG8 908 aaKnown RBP19.8■□□□□ 0.76
NSMCE3-201ENST00000332303 GNL3LQ9NVN8 582 aaKnown RBP19.8■□□□□ 0.76
NSMCE3-201ENST00000332303 CT47A1Q5JQC4 288 aaPredicted RBP19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 ZNF396Q96N95 335 aaPredicted RBP19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 FIBPO43427 364 aa19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 PRPF40AO75400 957 aaKnown RBP19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 ZNF771Q7L3S4 317 aaPredicted RBP19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 ACBD3Q9H3P7 528 aa19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 MTMR7Q9Y216 660 aa19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 JMYQ8N9B5 988 aa19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 CABP4P57796 275 aa19.79■□□□□ 0.76
NSMCE3-201ENST00000332303 IKQ13123 557 aaPredicted RBP19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 STK38Q15208 465 aa19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 ANKRD1Q15327 319 aa19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 BACH2Q9BYV9 841 aa19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 CDR1P51861 262 aa19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 SPG7Q9UQ90 795 aa19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 R3HCC1Q9Y3T6 440 aaKnown RBP19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 RUFY1Q96T51 708 aa19.78■□□□□ 0.76
NSMCE3-201ENST00000332303 TXLNAP40222 546 aa19.77■□□□□ 0.76
NSMCE3-201ENST00000332303 PDILTQ8N807 584 aa19.77■□□□□ 0.76
NSMCE3-201ENST00000332303 EPS15P42566 896 aa19.77■□□□□ 0.76
NSMCE3-201ENST00000332303 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
NSMCE3-201ENST00000332303 RRP12Q5JTH9 1297 aaKnown RBP19.77■□□□□ 0.76
NSMCE3-201ENST00000332303 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
NSMCE3-201ENST00000332303 TTC39AQ5SRH9 613 aa19.77■□□□□ 0.75
NSMCE3-201ENST00000332303 SLC26A8Q96RN1 970 aa19.77■□□□□ 0.75
NSMCE3-201ENST00000332303 TOM1L2Q6ZVM7 507 aa19.76■□□□□ 0.75
NSMCE3-201ENST00000332303 CCDC61Q9Y6R9 512 aa19.76■□□□□ 0.75
NSMCE3-201ENST00000332303 HSP90B2PQ58FF3 399 aa19.76■□□□□ 0.75
NSMCE3-201ENST00000332303 NACAP1Q9BZK3 213 aa19.76■□□□□ 0.75
NSMCE3-201ENST00000332303 RPAP2Q8IXW5 612 aaPredicted RBP19.76■□□□□ 0.75
NSMCE3-201ENST00000332303 RAPGEF3O95398 923 aa19.75■□□□□ 0.75
NSMCE3-201ENST00000332303 FILIP1LQ4L180 1135 aa19.75■□□□□ 0.75
NSMCE3-201ENST00000332303 TSPY26PQ9H489 355 aa19.75■□□□□ 0.75
NSMCE3-201ENST00000332303 CHD1LQ86WJ1 897 aa19.75■□□□□ 0.75
NSMCE3-201ENST00000332303 AEBP1Q8IUX7 1158 aa19.75■□□□□ 0.75
NSMCE3-201ENST00000332303 FMNL2Q96PY5 1086 aa19.75■□□□□ 0.75
NSMCE3-201ENST00000332303 ANKLE2Q86XL3 938 aa19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 WDR33Q9C0J8 1336 aaKnown RBP19.74■□□□□ 0.75
NSMCE3-201ENST00000332303 CCDC173Q0VFZ6 552 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms