RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 PAK3O75914 559 aaPredicted RBP29.23■■■□□ 2.27
YBX1-202ENST00000332220 PIK3C2AO00443 1686 aa29.23■■■□□ 2.27
YBX1-202ENST00000332220 NINLQ9Y2I6 1382 aa29.23■■■□□ 2.27
YBX1-202ENST00000332220 SSH2Q76I76 1423 aa29.22■■■□□ 2.27
YBX1-202ENST00000332220 LMOD2Q6P5Q4 547 aa29.22■■■□□ 2.27
YBX1-202ENST00000332220 ARHGEF10O15013 1369 aa29.22■■■□□ 2.27
YBX1-202ENST00000332220 C11orf95C9JLR9 678 aaPredicted RBP29.21■■■□□ 2.27
YBX1-202ENST00000332220 PHRF1Q9P1Y6 1649 aaKnown RBP29.2■■■□□ 2.27
YBX1-202ENST00000332220 NUTM2BA6NNL0 878 aaPredicted RBP29.2■■■□□ 2.26
YBX1-202ENST00000332220 NUTM2EB1AL46 878 aaPredicted RBP29.2■■■□□ 2.26
YBX1-202ENST00000332220 NUTM2AQ8IVF1 878 aaPredicted RBP29.2■■■□□ 2.26
YBX1-202ENST00000332220 A0A1W2PP64 1363 aa29.2■■■□□ 2.26
YBX1-202ENST00000332220 KTN1Q86UP2 1357 aaKnown RBP29.2■■■□□ 2.26
YBX1-202ENST00000332220 BRD4O60885 1362 aaPredicted RBP29.19■■■□□ 2.26
YBX1-202ENST00000332220 ZNF692Q9BU19 519 aaPredicted RBP29.19■■■□□ 2.26
YBX1-202ENST00000332220 ZEB1P37275 1124 aaPredicted RBP29.17■■■□□ 2.26
YBX1-202ENST00000332220 POLR3GLQ9BT43 218 aa29.16■■■□□ 2.26
YBX1-202ENST00000332220 PLEKHG5O94827 1062 aa29.15■■■□□ 2.26
YBX1-202ENST00000332220 HDGFL2Q7Z4V5 671 aaPredicted RBP29.15■■■□□ 2.26
YBX1-202ENST00000332220 TERF2IPQ9NYB0 399 aa29.15■■■□□ 2.26
YBX1-202ENST00000332220 CABLES1Q8TDN4 633 aa29.14■■■□□ 2.26
YBX1-202ENST00000332220 TTC21BQ7Z4L5 1316 aa29.14■■■□□ 2.25
YBX1-202ENST00000332220 ANKRD36BQ8N2N9 1353 aa29.13■■■□□ 2.25
YBX1-202ENST00000332220 USP54Q70EL1 1684 aa29.13■■■□□ 2.25
YBX1-202ENST00000332220 NUTM2GQ5VZR2 741 aa29.12■■■□□ 2.25
YBX1-202ENST00000332220 KIF20BQ96Q89 1820 aa29.12■■■□□ 2.25
YBX1-202ENST00000332220 EDC4Q6P2E9 1401 aaKnown RBP29.11■■■□□ 2.25
YBX1-202ENST00000332220 ABTB2Q8N961 1025 aa29.11■■■□□ 2.25
YBX1-202ENST00000332220 KIF7Q2M1P5 1343 aa29.1■■■□□ 2.25
YBX1-202ENST00000332220 ADAMTS2O95450 1211 aa29.09■■■□□ 2.25
YBX1-202ENST00000332220 TTC21AQ8NDW8 1320 aa29.09■■■□□ 2.25
YBX1-202ENST00000332220 MEX3CQ5U5Q3 659 aaKnown RBP29.07■■■□□ 2.24
YBX1-202ENST00000332220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.07■■■□□ 2.24
YBX1-202ENST00000332220 PLCH1Q4KWH8 1693 aa29.05■■■□□ 2.24
YBX1-202ENST00000332220 SLIT3O75094 1523 aa29.04■■■□□ 2.24
YBX1-202ENST00000332220 USP19O94966 1318 aa29.04■■■□□ 2.24
YBX1-202ENST00000332220 CCDC7Q96M83 1385 aa29.03■■■□□ 2.24
YBX1-202ENST00000332220 HAP1P54257 671 aaPredicted RBP29.03■■■□□ 2.24
YBX1-202ENST00000332220 NLRP6P59044 892 aa29.03■■■□□ 2.24
YBX1-202ENST00000332220 NLRP13Q86W25 1043 aa29.03■■■□□ 2.24
YBX1-202ENST00000332220 NME9Q86XW9 330 aa29.02■■■□□ 2.24
YBX1-202ENST00000332220 ZRANB1Q9UGI0 708 aa29.02■■■□□ 2.24
YBX1-202ENST00000332220 WASHC2AQ641Q2 1341 aa29.01■■■□□ 2.23
YBX1-202ENST00000332220 CARD14Q9BXL6 1004 aa29.01■■■□□ 2.23
YBX1-202ENST00000332220 C8orf37Q96NL8 207 aa29■■■□□ 2.23
YBX1-202ENST00000332220 NSD3Q9BZ95 1437 aa29■■■□□ 2.23
YBX1-202ENST00000332220 COL14A1Q05707 1796 aaKnown RBP28.99■■■□□ 2.23
YBX1-202ENST00000332220 PHF23Q9BUL5 403 aaPredicted RBP28.99■■■□□ 2.23
YBX1-202ENST00000332220 NWD2Q9ULI1 1742 aa28.99■■■□□ 2.23
YBX1-202ENST00000332220 USP31Q70CQ4 1352 aa28.99■■■□□ 2.23
YBX1-202ENST00000332220 ANKRD26Q9UPS8 1709 aa28.97■■■□□ 2.23
YBX1-202ENST00000332220 OVOS2A0A0J9YW53 1432 aa28.97■■■□□ 2.23
YBX1-202ENST00000332220 OVOS2Q6IE36 1432 aa28.97■■■□□ 2.23
YBX1-202ENST00000332220 RGS17Q9UGC6 210 aaPredicted RBP28.97■■■□□ 2.23
YBX1-202ENST00000332220 LTN1O94822 1766 aa28.97■■■□□ 2.23
YBX1-202ENST00000332220 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.97■■■□□ 2.23
YBX1-202ENST00000332220 RGPD5Q99666 1765 aa28.96■■■□□ 2.23
YBX1-202ENST00000332220 AFF2P51816 1311 aa28.95■■■□□ 2.23
YBX1-202ENST00000332220 NGLY1Q96IV0 654 aa28.95■■■□□ 2.22
YBX1-202ENST00000332220 PANK3Q9H999 370 aa28.95■■■□□ 2.22
YBX1-202ENST00000332220 NFAT5O94916 1531 aa28.94■■■□□ 2.22
YBX1-202ENST00000332220 NRAPQ86VF7 1730 aa28.94■■■□□ 2.22
YBX1-202ENST00000332220 GCP02774 474 aa28.94■■■□□ 2.22
YBX1-202ENST00000332220 COL18A1P39060 1754 aa28.93■■■□□ 2.22
YBX1-202ENST00000332220 KIAA0232Q92628 1395 aa28.92■■■□□ 2.22
YBX1-202ENST00000332220 ZC3H6P61129 1189 aaKnown RBP28.92■■■□□ 2.22
YBX1-202ENST00000332220 SLIT2O94813 1529 aa28.92■■■□□ 2.22
YBX1-202ENST00000332220 LMO7Q8WWI1 1683 aa28.91■■■□□ 2.22
YBX1-202ENST00000332220 FAM83GA6ND36 823 aa28.9■■■□□ 2.22
YBX1-202ENST00000332220 FYB1O15117 783 aa28.9■■■□□ 2.22
YBX1-202ENST00000332220 FNBP4Q8N3X1 1017 aaPredicted RBP28.89■■■□□ 2.22
YBX1-202ENST00000332220 CPDO75976 1380 aa28.88■■■□□ 2.21
YBX1-202ENST00000332220 SOX12O15370 315 aa28.88■■■□□ 2.21
YBX1-202ENST00000332220 GGNBP2Q9H3C7 697 aa28.88■■■□□ 2.21
YBX1-202ENST00000332220 PRDM11Q9NQV5 511 aa28.88■■■□□ 2.21
YBX1-202ENST00000332220 BCL9LQ86UU0 1499 aa28.87■■■□□ 2.21
YBX1-202ENST00000332220 CHRNA2Q15822 529 aa28.86■■■□□ 2.21
YBX1-202ENST00000332220 POTEAQ6S8J7 498 aa28.85■■■□□ 2.21
YBX1-202ENST00000332220 KCNH5Q8NCM2 988 aa28.85■■■□□ 2.21
YBX1-202ENST00000332220 MAP2P11137 1827 aaKnown RBP28.85■■■□□ 2.21
YBX1-202ENST00000332220 ZNF772Q68DY9 489 aaPredicted RBP28.84■■■□□ 2.21
YBX1-202ENST00000332220 COG3Q96JB2 828 aa28.84■■■□□ 2.21
YBX1-202ENST00000332220 USP21Q9UK80 565 aa28.84■■■□□ 2.21
YBX1-202ENST00000332220 CGNL1Q0VF96 1302 aa28.83■■■□□ 2.21
YBX1-202ENST00000332220 CAMTA1Q9Y6Y1 1673 aa28.83■■■□□ 2.21
YBX1-202ENST00000332220 ZBTB7CA1YPR0 619 aa28.8■■■□□ 2.2
YBX1-202ENST00000332220 ARHGEF25Q86VW2 580 aa28.8■■■□□ 2.2
YBX1-202ENST00000332220 BTG4Q9NY30 223 aa28.8■■■□□ 2.2
YBX1-202ENST00000332220 ATRNO75882 1429 aa28.79■■■□□ 2.2
YBX1-202ENST00000332220 UNC5CLQ8IV45 518 aa28.78■■■□□ 2.2
YBX1-202ENST00000332220 AATKQ6ZMQ8 1374 aa28.77■■■□□ 2.2
YBX1-202ENST00000332220 PER1O15534 1290 aaPredicted RBP28.77■■■□□ 2.2
YBX1-202ENST00000332220 FBLN1P23142 703 aa28.77■■■□□ 2.2
YBX1-202ENST00000332220 ABCC6O95255 1503 aa28.76■■■□□ 2.19
YBX1-202ENST00000332220 QTRT2Q9H974 415 aaKnown RBP28.76■■■□□ 2.19
YBX1-202ENST00000332220 KNSTRNQ9Y448 316 aa28.76■■■□□ 2.19
YBX1-202ENST00000332220 GLI3P10071 1580 aa28.75■■■□□ 2.19
YBX1-202ENST00000332220 PEAK1Q9H792 1746 aa28.74■■■□□ 2.19
YBX1-202ENST00000332220 TRPC5Q9UL62 973 aaPredicted RBP28.74■■■□□ 2.19
YBX1-202ENST00000332220 NSD2O96028 1365 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms