RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CERKQ8TCT0 537 aa9.71□□□□□ -0.85
SMG1-201ENST00000330588 NEURL4Q96JN8 1562 aa9.71□□□□□ -0.85
SMG1-201ENST00000330588 FAM50AQ14320 339 aaKnown RBP9.71□□□□□ -0.86
SMG1-201ENST00000330588 FBXO31Q5XUX0 539 aaPredicted RBP9.71□□□□□ -0.86
SMG1-201ENST00000330588 ZNF454Q8N9F8 522 aa9.71□□□□□ -0.86
SMG1-201ENST00000330588 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
SMG1-201ENST00000330588 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
SMG1-201ENST00000330588 TET3O43151 1660 aa9.71□□□□□ -0.86
SMG1-201ENST00000330588 UBR1Q8IWV7 1749 aa9.71□□□□□ -0.86
SMG1-201ENST00000330588 GCC2Q8IWJ2 1684 aa9.7□□□□□ -0.86
SMG1-201ENST00000330588 SLIT1O75093 1534 aa9.7□□□□□ -0.86
SMG1-201ENST00000330588 ARHGAP23Q9P227 1491 aa9.7□□□□□ -0.86
SMG1-201ENST00000330588 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
SMG1-201ENST00000330588 VPS9D1Q9Y2B5 631 aa9.7□□□□□ -0.86
SMG1-201ENST00000330588 NOS1P29475 1434 aa9.69□□□□□ -0.86
SMG1-201ENST00000330588 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.68□□□□□ -0.86
SMG1-201ENST00000330588 IQGAP3Q86VI3 1631 aa9.68□□□□□ -0.86
SMG1-201ENST00000330588 EVI5O60447 810 aa9.67□□□□□ -0.86
SMG1-201ENST00000330588 ANKLE2Q86XL3 938 aa9.67□□□□□ -0.86
SMG1-201ENST00000330588 CHIC2Q9UKJ5 165 aa9.67□□□□□ -0.86
SMG1-201ENST00000330588 CPS1P31327 1500 aa9.67□□□□□ -0.86
SMG1-201ENST00000330588 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
SMG1-201ENST00000330588 PAXIP1Q6ZW49 1069 aaPredicted RBP9.67□□□□□ -0.86
SMG1-201ENST00000330588 SYNMO15061 1565 aa9.66□□□□□ -0.86
SMG1-201ENST00000330588 NPHP4O75161 1426 aaPredicted RBP9.66□□□□□ -0.86
SMG1-201ENST00000330588 PIK3C2BO00750 1634 aa9.65□□□□□ -0.86
SMG1-201ENST00000330588 ADGRB3O60242 1522 aa9.65□□□□□ -0.86
SMG1-201ENST00000330588 SCAF11Q99590 1463 aaKnown RBP9.65□□□□□ -0.86
SMG1-201ENST00000330588 CADPS2Q86UW7 1296 aa9.65□□□□□ -0.86
SMG1-201ENST00000330588 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
SMG1-201ENST00000330588 SLC52A1Q9NWF4 448 aa9.65□□□□□ -0.86
SMG1-201ENST00000330588 PLA2G2EQ9NZK7 142 aa9.65□□□□□ -0.86
SMG1-201ENST00000330588 BHMG1C9JSJ3 638 aaPredicted RBP9.64□□□□□ -0.87
SMG1-201ENST00000330588 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
SMG1-201ENST00000330588 PTPREP23469 700 aa9.63□□□□□ -0.87
SMG1-201ENST00000330588 CFAP44Q96MT7 982 aa9.63□□□□□ -0.87
SMG1-201ENST00000330588 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
SMG1-201ENST00000330588 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
SMG1-201ENST00000330588 KCTD12Q96CX2 325 aaKnown RBP9.63□□□□□ -0.87
SMG1-201ENST00000330588 ADAM33Q9BZ11 813 aa9.63□□□□□ -0.87
SMG1-201ENST00000330588 E9PCH4 1651 aa9.63□□□□□ -0.87
SMG1-201ENST00000330588 TMEM2Q9UHN6 1383 aa9.62□□□□□ -0.87
SMG1-201ENST00000330588 MAP3K9P80192 1104 aa9.62□□□□□ -0.87
SMG1-201ENST00000330588 CFAP65Q6ZU64 1925 aaKnown RBP9.61□□□□□ -0.87
SMG1-201ENST00000330588 ZNF335Q9H4Z2 1342 aaPredicted RBP9.61□□□□□ -0.87
SMG1-201ENST00000330588 HFM1A2PYH4 1435 aa9.61□□□□□ -0.87
SMG1-201ENST00000330588 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
SMG1-201ENST00000330588 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
SMG1-201ENST00000330588 SPRYD3Q8NCJ5 442 aa9.6□□□□□ -0.87
SMG1-201ENST00000330588 EID1Q9Y6B2 187 aa9.6□□□□□ -0.87
SMG1-201ENST00000330588 TMEM131LA2VDJ0 1609 aa9.6□□□□□ -0.87
SMG1-201ENST00000330588 NAIPQ13075 1403 aa9.6□□□□□ -0.87
SMG1-201ENST00000330588 IDI1Q13907 227 aa9.59□□□□□ -0.87
SMG1-201ENST00000330588 NUP155O75694 1391 aa9.59□□□□□ -0.87
SMG1-201ENST00000330588 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
SMG1-201ENST00000330588 ZFYVE9O95405 1425 aa9.58□□□□□ -0.88
SMG1-201ENST00000330588 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
SMG1-201ENST00000330588 SPHKAPQ2M3C7 1700 aa9.57□□□□□ -0.88
SMG1-201ENST00000330588 HDGFP51858 240 aaKnown RBP9.57□□□□□ -0.88
SMG1-201ENST00000330588 TXNDC2Q86VQ3 553 aa9.57□□□□□ -0.88
SMG1-201ENST00000330588 DIP2AQ14689 1571 aa9.57□□□□□ -0.88
SMG1-201ENST00000330588 NWD1Q149M9 1564 aa9.57□□□□□ -0.88
SMG1-201ENST00000330588 LTKP29376 864 aa9.56□□□□□ -0.88
SMG1-201ENST00000330588 STRCP1A6NGW2 1772 aa9.56□□□□□ -0.88
SMG1-201ENST00000330588 PLEKHG1Q9ULL1 1385 aa9.56□□□□□ -0.88
SMG1-201ENST00000330588 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMG1-201ENST00000330588 NKTRP30414 1462 aaKnown RBP9.55□□□□□ -0.88
SMG1-201ENST00000330588 TRPM2O94759 1503 aa9.55□□□□□ -0.88
SMG1-201ENST00000330588 LRRC7Q96NW7 1537 aa9.55□□□□□ -0.88
SMG1-201ENST00000330588 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
SMG1-201ENST00000330588 THSD4Q6ZMP0 1018 aa9.54□□□□□ -0.88
SMG1-201ENST00000330588 MYO5BQ9ULV0 1848 aa9.54□□□□□ -0.88
SMG1-201ENST00000330588 RIMS2Q9UQ26 1411 aa9.54□□□□□ -0.88
SMG1-201ENST00000330588 PHF14O94880 888 aa9.54□□□□□ -0.88
SMG1-201ENST00000330588 ITGAEP38570 1179 aa9.53□□□□□ -0.88
SMG1-201ENST00000330588 TYW1BQ6NUM6 668 aa9.53□□□□□ -0.88
SMG1-201ENST00000330588 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
SMG1-201ENST00000330588 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
SMG1-201ENST00000330588 PIK3R4Q99570 1358 aa9.53□□□□□ -0.88
SMG1-201ENST00000330588 NCOA3Q9Y6Q9 1424 aa9.52□□□□□ -0.88
SMG1-201ENST00000330588 TOM1O60784 492 aa9.52□□□□□ -0.89
SMG1-201ENST00000330588 PPARGC1BQ86YN6 1023 aaKnown RBP9.52□□□□□ -0.89
SMG1-201ENST00000330588 MRPL50Q8N5N7 158 aaKnown RBP9.52□□□□□ -0.89
SMG1-201ENST00000330588 KCNA6P17658 529 aa9.51□□□□□ -0.89
SMG1-201ENST00000330588 COL9A1P20849 921 aa9.51□□□□□ -0.89
SMG1-201ENST00000330588 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
SMG1-201ENST00000330588 SETBP1Q9Y6X0 1596 aa9.51□□□□□ -0.89
SMG1-201ENST00000330588 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
SMG1-201ENST00000330588 CHD2O14647 1828 aaKnown RBP9.51□□□□□ -0.89
SMG1-201ENST00000330588 PTPN5P54829 565 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 TBX22Q9Y458 520 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 CLTCL1P53675 1640 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 XIRP1Q702N8 1843 aaKnown RBP9.5□□□□□ -0.89
SMG1-201ENST00000330588 UBAP1LF5GYI3 381 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 KIF1BO60333 1816 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 WNT2BQ93097 391 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 RABGEF1Q9UJ41 708 aa9.5□□□□□ -0.89
SMG1-201ENST00000330588 ADAMTS13Q76LX8 1427 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms