RNA–Protein interactions for RNA: ENST00000330298.6

CTNNA3-201, Transcript of catenin alpha 3, humanhuman

TSL 2

Gene CTNNA3, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-201ENST00000330298 SIN3AQ96ST3 1273 aa18.99■□□□□ 0.63
CTNNA3-201ENST00000330298 ONECUT3O60422 494 aaPredicted RBP18.98■□□□□ 0.63
CTNNA3-201ENST00000330298 CCDC125Q86Z20 511 aa18.98■□□□□ 0.63
CTNNA3-201ENST00000330298 ACEP12821 1306 aa18.98■□□□□ 0.63
CTNNA3-201ENST00000330298 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
CTNNA3-201ENST00000330298 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
CTNNA3-201ENST00000330298 COL14A1Q05707 1796 aaKnown RBP18.96■□□□□ 0.63
CTNNA3-201ENST00000330298 CRYBG1Q9Y4K1 1723 aa18.95■□□□□ 0.62
CTNNA3-201ENST00000330298 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
CTNNA3-201ENST00000330298 EP400Q96L91 3159 aa18.94■□□□□ 0.62
CTNNA3-201ENST00000330298 TRPM1Q7Z4N2 1603 aa18.94■□□□□ 0.62
CTNNA3-201ENST00000330298 SRPK2P78362 688 aaKnown RBP18.94■□□□□ 0.62
CTNNA3-201ENST00000330298 BTG4Q9NY30 223 aa18.94■□□□□ 0.62
CTNNA3-201ENST00000330298 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
CTNNA3-201ENST00000330298 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
CTNNA3-201ENST00000330298 NRAPQ86VF7 1730 aa18.92■□□□□ 0.62
CTNNA3-201ENST00000330298 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
CTNNA3-201ENST00000330298 CCDC9Q9Y3X0 531 aaKnown RBP18.92■□□□□ 0.62
CTNNA3-201ENST00000330298 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
CTNNA3-201ENST00000330298 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
CTNNA3-201ENST00000330298 CABP2Q9NPB3 220 aa18.91■□□□□ 0.62
CTNNA3-201ENST00000330298 PRDM11Q9NQV5 511 aa18.9■□□□□ 0.62
CTNNA3-201ENST00000330298 EVC2Q86UK5 1308 aa18.9■□□□□ 0.62
CTNNA3-201ENST00000330298 ABTB2Q8N961 1025 aa18.89■□□□□ 0.61
CTNNA3-201ENST00000330298 PHRF1Q9P1Y6 1649 aaKnown RBP18.88■□□□□ 0.61
CTNNA3-201ENST00000330298 SPATA31A5Q5VU36 1347 aa18.87■□□□□ 0.61
CTNNA3-201ENST00000330298 SPATA31A7Q8IWB4 1347 aa18.87■□□□□ 0.61
CTNNA3-201ENST00000330298 KIAA0232Q92628 1395 aa18.87■□□□□ 0.61
CTNNA3-201ENST00000330298 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
CTNNA3-201ENST00000330298 BLMP54132 1417 aaPredicted RBP18.86■□□□□ 0.61
CTNNA3-201ENST00000330298 USP19O94966 1318 aa18.86■□□□□ 0.61
CTNNA3-201ENST00000330298 KRT27Q7Z3Y8 459 aa18.86■□□□□ 0.61
CTNNA3-201ENST00000330298 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
CTNNA3-201ENST00000330298 CABP1Q9NZU7 370 aa18.86■□□□□ 0.61
CTNNA3-201ENST00000330298 CPDO75976 1380 aa18.85■□□□□ 0.61
CTNNA3-201ENST00000330298 NUTM2GQ5VZR2 741 aa18.85■□□□□ 0.61
CTNNA3-201ENST00000330298 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
CTNNA3-201ENST00000330298 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
CTNNA3-201ENST00000330298 USP6P35125 1406 aa18.83■□□□□ 0.61
CTNNA3-201ENST00000330298 ZC3H6P61129 1189 aaKnown RBP18.83■□□□□ 0.6
CTNNA3-201ENST00000330298 SBNO2Q9Y2G9 1366 aa18.82■□□□□ 0.6
CTNNA3-201ENST00000330298 NRKQ7Z2Y5 1582 aa18.82■□□□□ 0.6
CTNNA3-201ENST00000330298 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
CTNNA3-201ENST00000330298 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
CTNNA3-201ENST00000330298 TONSLQ96HA7 1378 aa18.81■□□□□ 0.6
CTNNA3-201ENST00000330298 SPATA31A1Q5TZJ5 1347 aa18.81■□□□□ 0.6
CTNNA3-201ENST00000330298 GCP02774 474 aa18.81■□□□□ 0.6
CTNNA3-201ENST00000330298 CHRNA2Q15822 529 aa18.81■□□□□ 0.6
CTNNA3-201ENST00000330298 A0A0G2JS52 829 aa18.8■□□□□ 0.6
CTNNA3-201ENST00000330298 MYT1Q01538 1121 aa18.8■□□□□ 0.6
CTNNA3-201ENST00000330298 SF3B2Q13435 895 aaKnown RBP18.8■□□□□ 0.6
CTNNA3-201ENST00000330298 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
CTNNA3-201ENST00000330298 ZRANB1Q9UGI0 708 aa18.79■□□□□ 0.6
CTNNA3-201ENST00000330298 THSD7AQ9UPZ6 1657 aa18.79■□□□□ 0.6
CTNNA3-201ENST00000330298 EVA1CP58658 441 aa18.78■□□□□ 0.6
CTNNA3-201ENST00000330298 LMO7Q8WWI1 1683 aa18.77■□□□□ 0.6
CTNNA3-201ENST00000330298 NLRP6P59044 892 aa18.77■□□□□ 0.6
CTNNA3-201ENST00000330298 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
CTNNA3-201ENST00000330298 CAMTA1Q9Y6Y1 1673 aa18.76■□□□□ 0.59
CTNNA3-201ENST00000330298 SLIT3O75094 1523 aa18.76■□□□□ 0.59
CTNNA3-201ENST00000330298 BARGINQ6ZT62 677 aa18.76■□□□□ 0.59
CTNNA3-201ENST00000330298 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
CTNNA3-201ENST00000330298 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
CTNNA3-201ENST00000330298 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
CTNNA3-201ENST00000330298 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
CTNNA3-201ENST00000330298 THRAP3Q9Y2W1 955 aaKnown RBP18.74■□□□□ 0.59
CTNNA3-201ENST00000330298 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
CTNNA3-201ENST00000330298 AATKQ6ZMQ8 1374 aa18.73■□□□□ 0.59
CTNNA3-201ENST00000330298 PIK3C2AO00443 1686 aa18.73■□□□□ 0.59
CTNNA3-201ENST00000330298 LARP1Q6PKG0 1096 aaKnown RBP18.72■□□□□ 0.59
CTNNA3-201ENST00000330298 DEFB132Q7Z7B7 95 aa18.72■□□□□ 0.59
CTNNA3-201ENST00000330298 TCP11L2Q8N4U5 519 aa18.72■□□□□ 0.59
CTNNA3-201ENST00000330298 KCNH5Q8NCM2 988 aa18.72■□□□□ 0.59
CTNNA3-201ENST00000330298 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
CTNNA3-201ENST00000330298 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
CTNNA3-201ENST00000330298 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
CTNNA3-201ENST00000330298 BAG6P46379 1132 aa18.71■□□□□ 0.59
CTNNA3-201ENST00000330298 FAM196AQ6ZSG2 479 aa18.7■□□□□ 0.58
CTNNA3-201ENST00000330298 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
CTNNA3-201ENST00000330298 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
CTNNA3-201ENST00000330298 SRCAPQ6ZRS2 3230 aa18.68■□□□□ 0.58
CTNNA3-201ENST00000330298 CRB1P82279 1406 aa18.68■□□□□ 0.58
CTNNA3-201ENST00000330298 DISP2A7MBM2 1401 aa18.67■□□□□ 0.58
CTNNA3-201ENST00000330298 PDE3BQ13370 1112 aa18.67■□□□□ 0.58
CTNNA3-201ENST00000330298 ARHGEF25Q86VW2 580 aa18.67■□□□□ 0.58
CTNNA3-201ENST00000330298 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
CTNNA3-201ENST00000330298 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
CTNNA3-201ENST00000330298 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
CTNNA3-201ENST00000330298 COL18A1P39060 1754 aa18.65■□□□□ 0.58
CTNNA3-201ENST00000330298 CD163L1Q9NR16 1453 aa18.65■□□□□ 0.58
CTNNA3-201ENST00000330298 C11orf95C9JLR9 678 aaPredicted RBP18.65■□□□□ 0.58
CTNNA3-201ENST00000330298 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
CTNNA3-201ENST00000330298 ZBTB7CA1YPR0 619 aa18.64■□□□□ 0.57
CTNNA3-201ENST00000330298 TMC1Q8TDI8 760 aa18.64■□□□□ 0.57
CTNNA3-201ENST00000330298 TESK2Q96S53 571 aa18.64■□□□□ 0.57
CTNNA3-201ENST00000330298 TERF2IPQ9NYB0 399 aa18.64■□□□□ 0.57
CTNNA3-201ENST00000330298 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
CTNNA3-201ENST00000330298 ABCC6O95255 1503 aa18.64■□□□□ 0.57
CTNNA3-201ENST00000330298 SLC12A5Q9H2X9 1139 aa18.63■□□□□ 0.57
CTNNA3-201ENST00000330298 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms