RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 NLRP13Q86W25 1043 aa9.4□□□□□ -0.9
TRIM49-201ENST00000329758 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
TRIM49-201ENST00000329758 SLC20A2Q08357 652 aa9.4□□□□□ -0.91
TRIM49-201ENST00000329758 SAFB2Q14151 953 aaKnown RBP eCLIP9.4□□□□□ -0.91
TRIM49-201ENST00000329758 SCAF11Q99590 1463 aaKnown RBP9.39□□□□□ -0.91
TRIM49-201ENST00000329758 IBTKQ9P2D0 1353 aaPredicted RBP9.39□□□□□ -0.91
TRIM49-201ENST00000329758 CLTCQ00610 1675 aaKnown RBP9.39□□□□□ -0.91
TRIM49-201ENST00000329758 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
TRIM49-201ENST00000329758 ARHGEF40Q8TER5 1519 aa9.39□□□□□ -0.91
TRIM49-201ENST00000329758 MYOM2P54296 1465 aa9.39□□□□□ -0.91
TRIM49-201ENST00000329758 EIF3AQ14152 1382 aaKnown RBP9.39□□□□□ -0.91
TRIM49-201ENST00000329758 REREQ9P2R6 1566 aa9.39□□□□□ -0.91
TRIM49-201ENST00000329758 MAPK8IP3Q9UPT6 1336 aa9.38□□□□□ -0.91
TRIM49-201ENST00000329758 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
TRIM49-201ENST00000329758 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
TRIM49-201ENST00000329758 BLMP54132 1417 aaPredicted RBP9.38□□□□□ -0.91
TRIM49-201ENST00000329758 AMER1Q5JTC6 1135 aaPredicted RBP9.37□□□□□ -0.91
TRIM49-201ENST00000329758 FBXO31Q5XUX0 539 aaPredicted RBP9.37□□□□□ -0.91
TRIM49-201ENST00000329758 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
TRIM49-201ENST00000329758 MCM5P33992 734 aa9.37□□□□□ -0.91
TRIM49-201ENST00000329758 MLECQ14165 292 aa9.37□□□□□ -0.91
TRIM49-201ENST00000329758 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
TRIM49-201ENST00000329758 ADAMTS8Q9UP79 889 aa9.37□□□□□ -0.91
TRIM49-201ENST00000329758 NRXN1Q9ULB1 1477 aa9.36□□□□□ -0.91
TRIM49-201ENST00000329758 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
TRIM49-201ENST00000329758 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
TRIM49-201ENST00000329758 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
TRIM49-201ENST00000329758 NOL7Q9UMY1 257 aaKnown RBP9.36□□□□□ -0.91
TRIM49-201ENST00000329758 MYOM1P52179 1685 aa9.36□□□□□ -0.91
TRIM49-201ENST00000329758 CCDC146Q8IYE0 955 aa9.36□□□□□ -0.91
TRIM49-201ENST00000329758 STK26Q9P289 416 aa9.36□□□□□ -0.91
TRIM49-201ENST00000329758 NCOA3Q9Y6Q9 1424 aa9.35□□□□□ -0.91
TRIM49-201ENST00000329758 NEXMIFQ5QGS0 1516 aa9.35□□□□□ -0.91
TRIM49-201ENST00000329758 IDI1Q13907 227 aa9.35□□□□□ -0.91
TRIM49-201ENST00000329758 TBC1D32Q96NH3 1257 aa9.35□□□□□ -0.91
TRIM49-201ENST00000329758 ARHGAP31Q2M1Z3 1444 aa9.35□□□□□ -0.91
TRIM49-201ENST00000329758 AGLP35573 1532 aa9.35□□□□□ -0.91
TRIM49-201ENST00000329758 PLIN1O60240 522 aa9.34□□□□□ -0.91
TRIM49-201ENST00000329758 NASPP49321 788 aaPredicted RBP9.34□□□□□ -0.91
TRIM49-201ENST00000329758 SLC12A5Q9H2X9 1139 aa9.34□□□□□ -0.91
TRIM49-201ENST00000329758 ERVK-7P63135 1459 aa9.34□□□□□ -0.91
TRIM49-201ENST00000329758 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
TRIM49-201ENST00000329758 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
TRIM49-201ENST00000329758 IRX3P78415 501 aaPredicted RBP9.34□□□□□ -0.91
TRIM49-201ENST00000329758 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
TRIM49-201ENST00000329758 DNTTIP2Q5QJE6 756 aaKnown RBP9.33□□□□□ -0.92
TRIM49-201ENST00000329758 MYO3AQ8NEV4 1616 aa9.33□□□□□ -0.92
TRIM49-201ENST00000329758 PIK3C2GO75747 1445 aa9.33□□□□□ -0.92
TRIM49-201ENST00000329758 GAS2L3Q86XJ1 694 aa9.33□□□□□ -0.92
TRIM49-201ENST00000329758 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
TRIM49-201ENST00000329758 DNAJC2Q99543 621 aaKnown RBP9.32□□□□□ -0.92
TRIM49-201ENST00000329758 ADGRB1O14514 1584 aa9.32□□□□□ -0.92
TRIM49-201ENST00000329758 SETBP1Q9Y6X0 1596 aa9.32□□□□□ -0.92
TRIM49-201ENST00000329758 KDM5AP29375 1690 aaKnown RBP9.32□□□□□ -0.92
TRIM49-201ENST00000329758 QRICH2Q9H0J4 1663 aa9.32□□□□□ -0.92
TRIM49-201ENST00000329758 NINLQ9Y2I6 1382 aa9.32□□□□□ -0.92
TRIM49-201ENST00000329758 MYRIPQ8NFW9 859 aa9.31□□□□□ -0.92
TRIM49-201ENST00000329758 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
TRIM49-201ENST00000329758 C14orf93Q9H972 538 aaKnown RBP9.31□□□□□ -0.92
TRIM49-201ENST00000329758 ZKSCAN5Q9Y2L8 839 aa9.31□□□□□ -0.92
TRIM49-201ENST00000329758 ARHGEF28Q8N1W1 1705 aaKnown RBP9.31□□□□□ -0.92
TRIM49-201ENST00000329758 PDLIM2Q96JY6 352 aa9.31□□□□□ -0.92
TRIM49-201ENST00000329758 ARID3AQ99856 593 aa9.31□□□□□ -0.92
TRIM49-201ENST00000329758 CABP2Q9NPB3 220 aa9.31□□□□□ -0.92
TRIM49-201ENST00000329758 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
TRIM49-201ENST00000329758 GTF2F1P35269 517 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIM49-201ENST00000329758 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
TRIM49-201ENST00000329758 RGS22Q8NE09 1264 aa9.3□□□□□ -0.92
TRIM49-201ENST00000329758 PLEKHH1Q9ULM0 1364 aa9.3□□□□□ -0.92
TRIM49-201ENST00000329758 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIM49-201ENST00000329758 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
TRIM49-201ENST00000329758 C20orf194Q5TEA3 1177 aa9.3□□□□□ -0.92
TRIM49-201ENST00000329758 SECISBP2LQ93073 1101 aaKnown RBP9.3□□□□□ -0.92
TRIM49-201ENST00000329758 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
TRIM49-201ENST00000329758 ASXL1Q8IXJ9 1541 aa9.29□□□□□ -0.92
TRIM49-201ENST00000329758 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
TRIM49-201ENST00000329758 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
TRIM49-201ENST00000329758 CGNQ9P2M7 1197 aaKnown RBP9.29□□□□□ -0.92
TRIM49-201ENST00000329758 SPATA31D1Q6ZQQ2 1576 aa9.29□□□□□ -0.92
TRIM49-201ENST00000329758 SEC24BO95487 1268 aa9.29□□□□□ -0.92
TRIM49-201ENST00000329758 HMGN5P82970 282 aaKnown RBP9.29□□□□□ -0.92
TRIM49-201ENST00000329758 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
TRIM49-201ENST00000329758 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
TRIM49-201ENST00000329758 CBX1P83916 185 aa9.28□□□□□ -0.92
TRIM49-201ENST00000329758 SPINK5Q9NQ38 1064 aaPredicted RBP9.28□□□□□ -0.92
TRIM49-201ENST00000329758 RNF216Q9NWF9 866 aaPredicted RBP9.28□□□□□ -0.92
TRIM49-201ENST00000329758 DMRT2Q9Y5R5 561 aa9.28□□□□□ -0.92
TRIM49-201ENST00000329758 CCDC66A2RUB6 948 aa9.27□□□□□ -0.92
TRIM49-201ENST00000329758 DDIT3P35638 169 aa9.27□□□□□ -0.92
TRIM49-201ENST00000329758 IRX5P78411 483 aaPredicted RBP9.27□□□□□ -0.92
TRIM49-201ENST00000329758 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.92
TRIM49-201ENST00000329758 PLPPR3Q6T4P5 718 aa9.27□□□□□ -0.92
TRIM49-201ENST00000329758 TSPYL1Q9H0U9 437 aa9.27□□□□□ -0.92
TRIM49-201ENST00000329758 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.92
TRIM49-201ENST00000329758 NSD3Q9BZ95 1437 aa9.27□□□□□ -0.92
TRIM49-201ENST00000329758 APAF1O14727 1248 aa9.27□□□□□ -0.93
TRIM49-201ENST00000329758 CCDC39Q9UFE4 941 aa9.27□□□□□ -0.93
TRIM49-201ENST00000329758 ZNF445P59923 1031 aa9.26□□□□□ -0.93
TRIM49-201ENST00000329758 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
TRIM49-201ENST00000329758 BCCIPQ9P287 314 aaKnown RBP eCLIP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms