RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 A0A1W2PP64 1363 aa28.05■■■□□ 2.08
RAB11B-201ENST00000328024 MYOM1P52179 1685 aa28.05■■■□□ 2.08
RAB11B-201ENST00000328024 KTN1Q86UP2 1357 aaKnown RBP28.05■■■□□ 2.08
RAB11B-201ENST00000328024 NINLQ9Y2I6 1382 aa28.05■■■□□ 2.08
RAB11B-201ENST00000328024 NUTM2BA6NNL0 878 aaPredicted RBP28.04■■■□□ 2.08
RAB11B-201ENST00000328024 NUTM2EB1AL46 878 aaPredicted RBP28.04■■■□□ 2.08
RAB11B-201ENST00000328024 NUTM2AQ8IVF1 878 aaPredicted RBP28.04■■■□□ 2.08
RAB11B-201ENST00000328024 MON2Q7Z3U7 1717 aa28.03■■■□□ 2.08
RAB11B-201ENST00000328024 ARHGEF10O15013 1369 aa28.02■■■□□ 2.08
RAB11B-201ENST00000328024 KIF7Q2M1P5 1343 aa28.02■■■□□ 2.08
RAB11B-201ENST00000328024 PLEKHG5O94827 1062 aa28.02■■■□□ 2.08
RAB11B-201ENST00000328024 CABLES1Q8TDN4 633 aa28.02■■■□□ 2.08
RAB11B-201ENST00000328024 TTC21BQ7Z4L5 1316 aa28.01■■■□□ 2.08
RAB11B-201ENST00000328024 NUTM2GQ5VZR2 741 aa28.01■■■□□ 2.08
RAB11B-201ENST00000328024 HDGFL2Q7Z4V5 671 aaPredicted RBP28.01■■■□□ 2.08
RAB11B-201ENST00000328024 TERF2IPQ9NYB0 399 aa28.01■■■□□ 2.08
RAB11B-201ENST00000328024 NRKQ7Z2Y5 1582 aa28.01■■■□□ 2.07
RAB11B-201ENST00000328024 BRD4O60885 1362 aaPredicted RBP28■■■□□ 2.07
RAB11B-201ENST00000328024 MED1Q15648 1581 aaPredicted RBP28■■■□□ 2.07
RAB11B-201ENST00000328024 ANKRD36BQ8N2N9 1353 aa27.99■■■□□ 2.07
RAB11B-201ENST00000328024 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
RAB11B-201ENST00000328024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.96■■■□□ 2.07
RAB11B-201ENST00000328024 CARD14Q9BXL6 1004 aa27.96■■■□□ 2.07
RAB11B-201ENST00000328024 WASHC2AQ641Q2 1341 aa27.95■■■□□ 2.07
RAB11B-201ENST00000328024 PIK3C2AO00443 1686 aa27.95■■■□□ 2.07
RAB11B-201ENST00000328024 EDC4Q6P2E9 1401 aaKnown RBP27.94■■■□□ 2.06
RAB11B-201ENST00000328024 CRYBG1Q9Y4K1 1723 aa27.94■■■□□ 2.06
RAB11B-201ENST00000328024 ADAMTS2O95450 1211 aa27.94■■■□□ 2.06
RAB11B-201ENST00000328024 ZRANB1Q9UGI0 708 aa27.94■■■□□ 2.06
RAB11B-201ENST00000328024 TTC21AQ8NDW8 1320 aa27.93■■■□□ 2.06
RAB11B-201ENST00000328024 CCDC7Q96M83 1385 aa27.93■■■□□ 2.06
RAB11B-201ENST00000328024 ABCA3Q99758 1704 aa27.93■■■□□ 2.06
RAB11B-201ENST00000328024 NME9Q86XW9 330 aa27.92■■■□□ 2.06
RAB11B-201ENST00000328024 NLRP6P59044 892 aa27.91■■■□□ 2.06
RAB11B-201ENST00000328024 NLRP13Q86W25 1043 aa27.89■■■□□ 2.06
RAB11B-201ENST00000328024 USP19O94966 1318 aa27.89■■■□□ 2.06
RAB11B-201ENST00000328024 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.06
RAB11B-201ENST00000328024 PANK3Q9H999 370 aa27.88■■■□□ 2.05
RAB11B-201ENST00000328024 MEX3CQ5U5Q3 659 aaKnown RBP27.88■■■□□ 2.05
RAB11B-201ENST00000328024 PHRF1Q9P1Y6 1649 aaKnown RBP27.86■■■□□ 2.05
RAB11B-201ENST00000328024 HAP1P54257 671 aaPredicted RBP27.86■■■□□ 2.05
RAB11B-201ENST00000328024 C8orf37Q96NL8 207 aa27.85■■■□□ 2.05
RAB11B-201ENST00000328024 RGS17Q9UGC6 210 aaPredicted RBP27.85■■■□□ 2.05
RAB11B-201ENST00000328024 USP31Q70CQ4 1352 aa27.85■■■□□ 2.05
RAB11B-201ENST00000328024 NSD3Q9BZ95 1437 aa27.85■■■□□ 2.05
RAB11B-201ENST00000328024 FYB1O15117 783 aa27.83■■■□□ 2.05
RAB11B-201ENST00000328024 GCP02774 474 aa27.83■■■□□ 2.05
RAB11B-201ENST00000328024 SLIT3O75094 1523 aa27.82■■■□□ 2.04
RAB11B-201ENST00000328024 FAM83GA6ND36 823 aa27.81■■■□□ 2.04
RAB11B-201ENST00000328024 ZC3H6P61129 1189 aaKnown RBP27.8■■■□□ 2.04
RAB11B-201ENST00000328024 USP54Q70EL1 1684 aa27.8■■■□□ 2.04
RAB11B-201ENST00000328024 OVOS2A0A0J9YW53 1432 aa27.8■■■□□ 2.04
RAB11B-201ENST00000328024 OVOS2Q6IE36 1432 aa27.8■■■□□ 2.04
RAB11B-201ENST00000328024 NGLY1Q96IV0 654 aa27.79■■■□□ 2.04
RAB11B-201ENST00000328024 GGNBP2Q9H3C7 697 aa27.79■■■□□ 2.04
RAB11B-201ENST00000328024 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
RAB11B-201ENST00000328024 KIAA0232Q92628 1395 aa27.78■■■□□ 2.04
RAB11B-201ENST00000328024 AFF2P51816 1311 aa27.77■■■□□ 2.04
RAB11B-201ENST00000328024 SOX12O15370 315 aa27.77■■■□□ 2.04
RAB11B-201ENST00000328024 FNBP4Q8N3X1 1017 aaPredicted RBP27.76■■■□□ 2.03
RAB11B-201ENST00000328024 CHRNA2Q15822 529 aa27.74■■■□□ 2.03
RAB11B-201ENST00000328024 KIF20BQ96Q89 1820 aa27.74■■■□□ 2.03
RAB11B-201ENST00000328024 PER1O15534 1290 aaPredicted RBP27.73■■■□□ 2.03
RAB11B-201ENST00000328024 NFAT5O94916 1531 aa27.73■■■□□ 2.03
RAB11B-201ENST00000328024 CPDO75976 1380 aa27.73■■■□□ 2.03
RAB11B-201ENST00000328024 SLIT2O94813 1529 aa27.73■■■□□ 2.03
RAB11B-201ENST00000328024 FBLN1P23142 703 aa27.73■■■□□ 2.03
RAB11B-201ENST00000328024 COG3Q96JB2 828 aa27.73■■■□□ 2.03
RAB11B-201ENST00000328024 PRDM11Q9NQV5 511 aa27.73■■■□□ 2.03
RAB11B-201ENST00000328024 KCNH5Q8NCM2 988 aa27.72■■■□□ 2.03
RAB11B-201ENST00000328024 BCL9LQ86UU0 1499 aa27.72■■■□□ 2.03
RAB11B-201ENST00000328024 CGNL1Q0VF96 1302 aa27.72■■■□□ 2.03
RAB11B-201ENST00000328024 POTEAQ6S8J7 498 aa27.7■■■□□ 2.02
RAB11B-201ENST00000328024 ARHGEF25Q86VW2 580 aa27.7■■■□□ 2.02
RAB11B-201ENST00000328024 USP21Q9UK80 565 aa27.7■■■□□ 2.02
RAB11B-201ENST00000328024 PLCH1Q4KWH8 1693 aa27.69■■■□□ 2.02
RAB11B-201ENST00000328024 COL14A1Q05707 1796 aaKnown RBP27.69■■■□□ 2.02
RAB11B-201ENST00000328024 KNSTRNQ9Y448 316 aa27.68■■■□□ 2.02
RAB11B-201ENST00000328024 ZBTB7CA1YPR0 619 aa27.67■■■□□ 2.02
RAB11B-201ENST00000328024 AMER1Q5JTC6 1135 aaPredicted RBP27.67■■■□□ 2.02
RAB11B-201ENST00000328024 BTG4Q9NY30 223 aa27.67■■■□□ 2.02
RAB11B-201ENST00000328024 ZNF772Q68DY9 489 aaPredicted RBP27.66■■■□□ 2.02
RAB11B-201ENST00000328024 COL18A1P39060 1754 aa27.65■■■□□ 2.02
RAB11B-201ENST00000328024 LMO7Q8WWI1 1683 aa27.64■■■□□ 2.02
RAB11B-201ENST00000328024 CAMTA1Q9Y6Y1 1673 aa27.64■■■□□ 2.02
RAB11B-201ENST00000328024 UNC5CLQ8IV45 518 aa27.64■■■□□ 2.02
RAB11B-201ENST00000328024 AXIN2Q9Y2T1 843 aa27.64■■■□□ 2.02
RAB11B-201ENST00000328024 NWD2Q9ULI1 1742 aa27.63■■■□□ 2.01
RAB11B-201ENST00000328024 AATKQ6ZMQ8 1374 aa27.63■■■□□ 2.01
RAB11B-201ENST00000328024 QTRT2Q9H974 415 aaKnown RBP27.63■■■□□ 2.01
RAB11B-201ENST00000328024 NRAPQ86VF7 1730 aa27.62■■■□□ 2.01
RAB11B-201ENST00000328024 ATRNO75882 1429 aa27.6■■■□□ 2.01
RAB11B-201ENST00000328024 ANKRD26Q9UPS8 1709 aa27.6■■■□□ 2.01
RAB11B-201ENST00000328024 LTN1O94822 1766 aa27.59■■■□□ 2.01
RAB11B-201ENST00000328024 MAP3K19Q56UN5 1328 aa27.59■■■□□ 2.01
RAB11B-201ENST00000328024 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.59■■■□□ 2.01
RAB11B-201ENST00000328024 RRS1Q15050 365 aaKnown RBP27.59■■■□□ 2.01
RAB11B-201ENST00000328024 NSD2O96028 1365 aa27.59■■■□□ 2.01
RAB11B-201ENST00000328024 DDX10Q13206 875 aaKnown RBP27.58■■■□□ 2.01
RAB11B-201ENST00000328024 TRPC5Q9UL62 973 aaPredicted RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms