RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 ZNF396Q96N95 335 aaPredicted RBP7.53□□□□□ -1.2
SSH1-202ENST00000326495 R3HCC1Q9Y3T6 440 aaKnown RBP7.53□□□□□ -1.2
SSH1-202ENST00000326495 MYO10Q9HD67 2058 aa7.52□□□□□ -1.2
SSH1-202ENST00000326495 KIAA0754O94854 1291 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 GBP2P32456 591 aaPredicted RBP7.52□□□□□ -1.21
SSH1-202ENST00000326495 MLECQ14165 292 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 LRRC9Q6ZRR7 1453 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 C1orf141Q5JVX7 400 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 PYM1Q9BRP8 204 aaKnown RBP7.52□□□□□ -1.21
SSH1-202ENST00000326495 GTPBP4Q9BZE4 634 aaKnown RBP7.52□□□□□ -1.21
SSH1-202ENST00000326495 GGT6Q6P531 493 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 CCDC192P0DO97 292 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 TOMM22Q9NS69 142 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 ZNF330Q9Y3S2 320 aaPredicted RBP7.52□□□□□ -1.21
SSH1-202ENST00000326495 GOLGA6L9A6NEM1 432 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 CDKL5O76039 1030 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 HOOK3Q86VS8 718 aa7.52□□□□□ -1.21
SSH1-202ENST00000326495 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 SMC2O95347 1197 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 VPS53Q5VIR6 699 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 CFAP45Q9UL16 551 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 NEMFO60524 1076 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 ATAD2Q6PL18 1390 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 RALYLQ86SE5 291 aaKnown RBP7.51□□□□□ -1.21
SSH1-202ENST00000326495 TRIM5Q9C035 493 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 SMG6Q86US8 1419 aaKnown RBP7.51□□□□□ -1.21
SSH1-202ENST00000326495 FRAT2O75474 233 aaPredicted RBP7.51□□□□□ -1.21
SSH1-202ENST00000326495 COG6Q9Y2V7 657 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 TDRD9Q8NDG6 1382 aaKnown RBP7.51□□□□□ -1.21
SSH1-202ENST00000326495 LUZP1Q86V48 1076 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 A6NNZ2 444 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 GNAI3P08754 354 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 NAP1L1P55209 391 aaKnown RBP7.51□□□□□ -1.21
SSH1-202ENST00000326495 TUBB8Q3ZCM7 444 aa7.51□□□□□ -1.21
SSH1-202ENST00000326495 CCDC141Q6ZP82 1450 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 POTEB2H3BUK9 544 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 CT47A1Q5JQC4 288 aaPredicted RBP7.5□□□□□ -1.21
SSH1-202ENST00000326495 OFD1O75665 1012 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 G3BP1Q13283 466 aaKnown RBP eCLIP7.5□□□□□ -1.21
SSH1-202ENST00000326495 GCC1Q96CN9 775 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 CCDC43Q96MW1 224 aaKnown RBP7.5□□□□□ -1.21
SSH1-202ENST00000326495 FMNL3Q8IVF7 1028 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 G3V3G9 751 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 DCAF8Q5TAQ9 597 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 FANCD2Q9BXW9 1451 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 VPS37CA5D8V6 355 aaPredicted RBP7.5□□□□□ -1.21
SSH1-202ENST00000326495 KRT32Q14532 448 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 IMMTQ16891 758 aaKnown RBP7.5□□□□□ -1.21
SSH1-202ENST00000326495 CTTNBP2Q8WZ74 1663 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 CETN2P41208 172 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 WWC2Q6AWC2 1192 aa7.5□□□□□ -1.21
SSH1-202ENST00000326495 TIAM1Q13009 1591 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 TOP2BQ02880 1626 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 PLIN1O60240 522 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 CASKIN1Q8WXD9 1431 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 SDF4Q9BRK5 362 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 PATL2C9JE40 543 aaKnown RBP7.49□□□□□ -1.21
SSH1-202ENST00000326495 NGDNQ8NEJ9 315 aaKnown RBP7.49□□□□□ -1.21
SSH1-202ENST00000326495 WDR33Q9C0J8 1336 aaKnown RBP7.49□□□□□ -1.21
SSH1-202ENST00000326495 CCDC83Q8IWF9 413 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 CCDC112Q8NEF3 446 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 CC2D2AQ9P2K1 1620 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 TRIM34Q9BYJ4 488 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 FBXO3Q9UK99 471 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 MICALCLQ6ZW33 695 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 GRPEL1Q9HAV7 217 aa7.49□□□□□ -1.21
SSH1-202ENST00000326495 FGFR1OPO95684 399 aaKnown RBP7.48□□□□□ -1.21
SSH1-202ENST00000326495 CTAGE5O15320 804 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 SLC4A3P48751 1232 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 ATAD2BQ9ULI0 1458 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 TEFQ10587 303 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 FOXD4L6Q3SYB3 417 aaPredicted RBP7.48□□□□□ -1.21
SSH1-202ENST00000326495 FOXD4L3Q6VB84 417 aaPredicted RBP7.48□□□□□ -1.21
SSH1-202ENST00000326495 PNISRQ8TF01 805 aaKnown RBP7.48□□□□□ -1.21
SSH1-202ENST00000326495 SH3BGRP55822 239 aaPredicted RBP7.48□□□□□ -1.21
SSH1-202ENST00000326495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.48□□□□□ -1.21
SSH1-202ENST00000326495 ZNF287Q9HBT7 754 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 PPM1EQ8WY54 764 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 SLC26A8Q96RN1 970 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 MAGEC2Q9UBF1 373 aaPredicted RBP7.48□□□□□ -1.21
SSH1-202ENST00000326495 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.48□□□□□ -1.21
SSH1-202ENST00000326495 V9GYY5 206 aaPredicted RBP7.48□□□□□ -1.21
SSH1-202ENST00000326495 CTR9Q6PD62 1173 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 WASF1Q92558 559 aa7.48□□□□□ -1.21
SSH1-202ENST00000326495 HOXA7P31268 230 aaPredicted RBP7.47□□□□□ -1.21
SSH1-202ENST00000326495 MYH10P35580 1976 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 GAPVD1Q14C86 1478 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 DIAPH1O60610 1272 aaKnown RBP7.47□□□□□ -1.21
SSH1-202ENST00000326495 WDR97A6NE52 1622 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 RIPK4P57078 832 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 THOC2Q8NI27 1593 aaKnown RBP7.47□□□□□ -1.21
SSH1-202ENST00000326495 TTC5Q8N0Z6 440 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 ZSCAN25Q6NSZ9 544 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 RRP7AQ9Y3A4 280 aaKnown RBP7.47□□□□□ -1.21
SSH1-202ENST00000326495 PTPN23Q9H3S7 1636 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 UQCRHLA0A096LP55 91 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 UQCRHP07919 91 aa7.47□□□□□ -1.21
SSH1-202ENST00000326495 SYCP1Q15431 976 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms