RNA–Protein interactions for RNA: ENST00000324894.12

GTPBP3-201, Transcript of GTP binding protein 3, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTPBP3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-201ENST00000324894 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
GTPBP3-201ENST00000324894 XRN1Q8IZH2 1706 aaKnown RBP22.22■■□□□ 1.15
GTPBP3-201ENST00000324894 E9PSI1 815 aa22.22■■□□□ 1.15
GTPBP3-201ENST00000324894 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
GTPBP3-201ENST00000324894 NRKQ7Z2Y5 1582 aa22.21■■□□□ 1.15
GTPBP3-201ENST00000324894 CCDC136Q96JN2 1154 aa22.21■■□□□ 1.15
GTPBP3-201ENST00000324894 CCDC61Q9Y6R9 512 aa22.21■■□□□ 1.15
GTPBP3-201ENST00000324894 ADAMTSL3P82987 1691 aa22.21■■□□□ 1.15
GTPBP3-201ENST00000324894 PTCH1Q13635 1447 aa22.2■■□□□ 1.15
GTPBP3-201ENST00000324894 ANO8Q9HCE9 1232 aaPredicted RBP22.2■■□□□ 1.14
GTPBP3-201ENST00000324894 WWC1Q8IX03 1113 aa22.2■■□□□ 1.14
GTPBP3-201ENST00000324894 PNPLA6Q8IY17 1366 aa22.19■■□□□ 1.14
GTPBP3-201ENST00000324894 TBX22Q9Y458 520 aa22.19■■□□□ 1.14
GTPBP3-201ENST00000324894 NCBP3Q53F19 620 aaKnown RBP22.19■■□□□ 1.14
GTPBP3-201ENST00000324894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
GTPBP3-201ENST00000324894 TCP11L2Q8N4U5 519 aa22.19■■□□□ 1.14
GTPBP3-201ENST00000324894 SLC26A8Q96RN1 970 aa22.19■■□□□ 1.14
GTPBP3-201ENST00000324894 SPINK5Q9NQ38 1064 aaPredicted RBP22.19■■□□□ 1.14
GTPBP3-201ENST00000324894 EXOC6Q8TAG9 804 aa22.18■■□□□ 1.14
GTPBP3-201ENST00000324894 PRR36Q9H6K5 1346 aa22.18■■□□□ 1.14
GTPBP3-201ENST00000324894 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
GTPBP3-201ENST00000324894 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
GTPBP3-201ENST00000324894 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
GTPBP3-201ENST00000324894 DMRT2Q9Y5R5 561 aa22.16■■□□□ 1.14
GTPBP3-201ENST00000324894 CCDC27Q2M243 656 aa22.16■■□□□ 1.14
GTPBP3-201ENST00000324894 PLIN1O60240 522 aa22.15■■□□□ 1.14
GTPBP3-201ENST00000324894 NCKAP5LQ9HCH0 1330 aa22.14■■□□□ 1.13
GTPBP3-201ENST00000324894 DEKP35659 375 aaKnown RBP22.13■■□□□ 1.13
GTPBP3-201ENST00000324894 ZNF692Q9BU19 519 aaPredicted RBP22.13■■□□□ 1.13
GTPBP3-201ENST00000324894 AMOTL2Q9Y2J4 779 aa22.13■■□□□ 1.13
GTPBP3-201ENST00000324894 RRP7AQ9Y3A4 280 aaKnown RBP22.13■■□□□ 1.13
GTPBP3-201ENST00000324894 WDR63Q8IWG1 891 aa22.12■■□□□ 1.13
GTPBP3-201ENST00000324894 RGPD8O14715 1765 aaPredicted RBP22.12■■□□□ 1.13
GTPBP3-201ENST00000324894 CDK12Q9NYV4 1490 aaPredicted RBP22.12■■□□□ 1.13
GTPBP3-201ENST00000324894 DIAPH1O60610 1272 aaKnown RBP22.11■■□□□ 1.13
GTPBP3-201ENST00000324894 AATKQ6ZMQ8 1374 aa22.11■■□□□ 1.13
GTPBP3-201ENST00000324894 SETD1BQ9UPS6 1966 aaKnown RBP22.11■■□□□ 1.13
GTPBP3-201ENST00000324894 U2SURPO15042 1029 aaKnown RBP22.11■■□□□ 1.13
GTPBP3-201ENST00000324894 NEUROD2Q15784 382 aa22.11■■□□□ 1.13
GTPBP3-201ENST00000324894 NME9Q86XW9 330 aa22.11■■□□□ 1.13
GTPBP3-201ENST00000324894 NALCNQ8IZF0 1738 aa22.11■■□□□ 1.13
GTPBP3-201ENST00000324894 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
GTPBP3-201ENST00000324894 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
GTPBP3-201ENST00000324894 POLKQ9UBT6 870 aa22.1■■□□□ 1.13
GTPBP3-201ENST00000324894 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
GTPBP3-201ENST00000324894 PIK3R4Q99570 1358 aa22.09■■□□□ 1.13
GTPBP3-201ENST00000324894 FANCIQ9NVI1 1328 aa22.09■■□□□ 1.13
GTPBP3-201ENST00000324894 CHD2O14647 1828 aaKnown RBP22.09■■□□□ 1.13
GTPBP3-201ENST00000324894 CRBNQ96SW2 442 aa22.08■■□□□ 1.13
GTPBP3-201ENST00000324894 PLEKHG3A1L390 1219 aa22.08■■□□□ 1.12
GTPBP3-201ENST00000324894 COG3Q96JB2 828 aa22.06■■□□□ 1.12
GTPBP3-201ENST00000324894 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
GTPBP3-201ENST00000324894 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
GTPBP3-201ENST00000324894 USP6P35125 1406 aa22.06■■□□□ 1.12
GTPBP3-201ENST00000324894 MAPK8IP3Q9UPT6 1336 aa22.06■■□□□ 1.12
GTPBP3-201ENST00000324894 C20orf194Q5TEA3 1177 aa22.05■■□□□ 1.12
GTPBP3-201ENST00000324894 ACEP12821 1306 aa22.05■■□□□ 1.12
GTPBP3-201ENST00000324894 ZRANB1Q9UGI0 708 aa22.04■■□□□ 1.12
GTPBP3-201ENST00000324894 FBLN1P23142 703 aa22.03■■□□□ 1.12
GTPBP3-201ENST00000324894 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
GTPBP3-201ENST00000324894 OVOS2A0A0J9YW53 1432 aa22.03■■□□□ 1.12
GTPBP3-201ENST00000324894 OVOS2Q6IE36 1432 aa22.03■■□□□ 1.12
GTPBP3-201ENST00000324894 TTC21BQ7Z4L5 1316 aa22.02■■□□□ 1.12
GTPBP3-201ENST00000324894 EMILIN1Q9Y6C2 1016 aa22.02■■□□□ 1.12
GTPBP3-201ENST00000324894 PPM1GO15355 546 aaPredicted RBP22.01■■□□□ 1.11
GTPBP3-201ENST00000324894 FCHSD2O94868 740 aa22.01■■□□□ 1.11
GTPBP3-201ENST00000324894 SSH2Q76I76 1423 aa22.01■■□□□ 1.11
GTPBP3-201ENST00000324894 MYH16Q9H6N6 1097 aa22.01■■□□□ 1.11
GTPBP3-201ENST00000324894 ANKARQ7Z5J8 1434 aa22.01■■□□□ 1.11
GTPBP3-201ENST00000324894 NUTM2FA1L443 756 aa21.99■■□□□ 1.11
GTPBP3-201ENST00000324894 BCAR3O75815 825 aa21.99■■□□□ 1.11
GTPBP3-201ENST00000324894 ANKLE2Q86XL3 938 aa21.98■■□□□ 1.11
GTPBP3-201ENST00000324894 RSPH6AQ9H0K4 717 aa21.98■■□□□ 1.11
GTPBP3-201ENST00000324894 KCNA6P17658 529 aa21.98■■□□□ 1.11
GTPBP3-201ENST00000324894 TRIM35Q9UPQ4 493 aa21.98■■□□□ 1.11
GTPBP3-201ENST00000324894 DLG5Q8TDM6 1919 aa21.97■■□□□ 1.11
GTPBP3-201ENST00000324894 IL13P35225 146 aa21.97■■□□□ 1.11
GTPBP3-201ENST00000324894 IL16Q14005 1332 aa21.96■■□□□ 1.11
GTPBP3-201ENST00000324894 PEAK1Q9H792 1746 aa21.96■■□□□ 1.11
GTPBP3-201ENST00000324894 PIK3C2AO00443 1686 aa21.95■■□□□ 1.11
GTPBP3-201ENST00000324894 TTC21AQ8NDW8 1320 aa21.95■■□□□ 1.1
GTPBP3-201ENST00000324894 USP54Q70EL1 1684 aa21.95■■□□□ 1.1
GTPBP3-201ENST00000324894 PRKAR2BP31323 418 aa21.94■■□□□ 1.1
GTPBP3-201ENST00000324894 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
GTPBP3-201ENST00000324894 USP31Q70CQ4 1352 aa21.94■■□□□ 1.1
GTPBP3-201ENST00000324894 RARSP54136 660 aaKnown RBP21.94■■□□□ 1.1
GTPBP3-201ENST00000324894 RIPK4P57078 832 aa21.94■■□□□ 1.1
GTPBP3-201ENST00000324894 NEFMP07197 916 aa21.93■■□□□ 1.1
GTPBP3-201ENST00000324894 PDE3AQ14432 1141 aa21.93■■□□□ 1.1
GTPBP3-201ENST00000324894 RGPD1P0DJD0 1748 aa21.92■■□□□ 1.1
GTPBP3-201ENST00000324894 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
GTPBP3-201ENST00000324894 CT47B1P0C2W7 299 aaPredicted RBP21.92■■□□□ 1.1
GTPBP3-201ENST00000324894 PMFBP1Q8TBY8 1022 aa21.91■■□□□ 1.1
GTPBP3-201ENST00000324894 HMOX1P09601 288 aa21.89■■□□□ 1.09
GTPBP3-201ENST00000324894 NGDNQ8NEJ9 315 aaKnown RBP21.89■■□□□ 1.09
GTPBP3-201ENST00000324894 NPHP4O75161 1426 aaPredicted RBP21.88■■□□□ 1.09
GTPBP3-201ENST00000324894 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
GTPBP3-201ENST00000324894 NFE2L2Q16236 605 aa21.88■■□□□ 1.09
GTPBP3-201ENST00000324894 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
GTPBP3-201ENST00000324894 TSR2Q969E8 191 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms