RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DHX57Q6P158 1386 aaKnown RBP10.79□□□□□ -0.68
CSTF3-201ENST00000323959 HFM1A2PYH4 1435 aa10.79□□□□□ -0.68
CSTF3-201ENST00000323959 MLLT1Q03111 559 aaPredicted RBP10.78□□□□□ -0.68
CSTF3-201ENST00000323959 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
CSTF3-201ENST00000323959 HSPA1AP0DMV8 641 aaKnown RBP10.78□□□□□ -0.68
CSTF3-201ENST00000323959 HSPA1BP0DMV9 641 aaKnown RBP10.78□□□□□ -0.68
CSTF3-201ENST00000323959 RGS19P49795 217 aa10.78□□□□□ -0.68
CSTF3-201ENST00000323959 SBNO1A3KN83 1393 aa10.77□□□□□ -0.68
CSTF3-201ENST00000323959 METP08581 1390 aa10.76□□□□□ -0.69
CSTF3-201ENST00000323959 KIF15Q9NS87 1388 aa10.76□□□□□ -0.69
CSTF3-201ENST00000323959 RBM46Q8TBY0 533 aaKnown RBP10.76□□□□□ -0.69
CSTF3-201ENST00000323959 QSER1Q2KHR3 1735 aa10.76□□□□□ -0.69
CSTF3-201ENST00000323959 PEAK1Q9H792 1746 aa10.76□□□□□ -0.69
CSTF3-201ENST00000323959 ESCO1Q5FWF5 840 aa10.75□□□□□ -0.69
CSTF3-201ENST00000323959 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
CSTF3-201ENST00000323959 SPATA31A1Q5TZJ5 1347 aa10.74□□□□□ -0.69
CSTF3-201ENST00000323959 FSTL1Q12841 308 aa10.74□□□□□ -0.69
CSTF3-201ENST00000323959 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
CSTF3-201ENST00000323959 PDGFDQ9GZP0 370 aaPredicted RBP10.74□□□□□ -0.69
CSTF3-201ENST00000323959 PRDM10Q9NQV6 1147 aa10.74□□□□□ -0.69
CSTF3-201ENST00000323959 TOPAZ1Q8N9V7 1692 aa10.74□□□□□ -0.69
CSTF3-201ENST00000323959 USP19O94966 1318 aa10.74□□□□□ -0.69
CSTF3-201ENST00000323959 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
CSTF3-201ENST00000323959 PARP4Q9UKK3 1724 aaKnown RBP10.73□□□□□ -0.69
CSTF3-201ENST00000323959 SBF2Q86WG5 1849 aa10.73□□□□□ -0.69
CSTF3-201ENST00000323959 SLC15A2Q16348 729 aa10.73□□□□□ -0.69
CSTF3-201ENST00000323959 BARGINQ6ZT62 677 aa10.73□□□□□ -0.69
CSTF3-201ENST00000323959 BTG4Q9NY30 223 aa10.73□□□□□ -0.69
CSTF3-201ENST00000323959 FOXO3O43524 673 aa10.73□□□□□ -0.69
CSTF3-201ENST00000323959 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
CSTF3-201ENST00000323959 PSME1Q06323 249 aa10.72□□□□□ -0.69
CSTF3-201ENST00000323959 YBX3P16989 372 aaKnown RBP eCLIP10.71□□□□□ -0.69
CSTF3-201ENST00000323959 POLD1P28340 1107 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 XPCQ01831 940 aaPredicted RBP10.7□□□□□ -0.7
CSTF3-201ENST00000323959 FMN2Q9NZ56 1722 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 PAPPAQ13219 1627 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 OVOS2A0A0G2JMS6 1433 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 OVOS2A0A0J9YW53 1432 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 OVOS2Q6IE36 1432 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 C10orf71Q711Q0 1435 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 ZNF526Q8TF50 670 aaPredicted RBP10.7□□□□□ -0.7
CSTF3-201ENST00000323959 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
CSTF3-201ENST00000323959 CICQ96RK0 1608 aaPredicted RBP10.69□□□□□ -0.7
CSTF3-201ENST00000323959 KRT28Q7Z3Y7 464 aa10.69□□□□□ -0.7
CSTF3-201ENST00000323959 ATP7BP35670 1465 aa10.69□□□□□ -0.7
CSTF3-201ENST00000323959 ROBO2Q9HCK4 1378 aa10.69□□□□□ -0.7
CSTF3-201ENST00000323959 BCL9O00512 1426 aa10.68□□□□□ -0.7
CSTF3-201ENST00000323959 CRYBG1Q9Y4K1 1723 aa10.67□□□□□ -0.7
CSTF3-201ENST00000323959 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
CSTF3-201ENST00000323959 MYOM3Q5VTT5 1437 aa10.66□□□□□ -0.7
CSTF3-201ENST00000323959 NAIPQ13075 1403 aa10.65□□□□□ -0.7
CSTF3-201ENST00000323959 CABLES1Q8TDN4 633 aa10.65□□□□□ -0.71
CSTF3-201ENST00000323959 ABHD8Q96I13 439 aa10.64□□□□□ -0.71
CSTF3-201ENST00000323959 TECPR2O15040 1411 aa10.64□□□□□ -0.71
CSTF3-201ENST00000323959 NLGN2Q8NFZ4 835 aa10.64□□□□□ -0.71
CSTF3-201ENST00000323959 ALS2Q96Q42 1657 aa10.63□□□□□ -0.71
CSTF3-201ENST00000323959 PROM2Q8N271 834 aa10.63□□□□□ -0.71
CSTF3-201ENST00000323959 THRAP3Q9Y2W1 955 aaKnown RBP10.63□□□□□ -0.71
CSTF3-201ENST00000323959 NRXN1Q9ULB1 1477 aa10.62□□□□□ -0.71
CSTF3-201ENST00000323959 TRPM3Q9HCF6 1732 aaPredicted RBP10.62□□□□□ -0.71
CSTF3-201ENST00000323959 BRD4O60885 1362 aaPredicted RBP10.62□□□□□ -0.71
CSTF3-201ENST00000323959 TXNRD1Q16881 649 aa10.61□□□□□ -0.71
CSTF3-201ENST00000323959 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
CSTF3-201ENST00000323959 C16orf71Q8IYS4 520 aaPredicted RBP10.6□□□□□ -0.71
CSTF3-201ENST00000323959 E9PCH4 1651 aa10.6□□□□□ -0.71
CSTF3-201ENST00000323959 PXDNLA1KZ92 1463 aa10.6□□□□□ -0.71
CSTF3-201ENST00000323959 CTCFP49711 727 aaPredicted RBP10.59□□□□□ -0.71
CSTF3-201ENST00000323959 HTRA3P83110 453 aa10.59□□□□□ -0.71
CSTF3-201ENST00000323959 SSH2Q76I76 1423 aa10.59□□□□□ -0.71
CSTF3-201ENST00000323959 LRRC37A3O60309 1634 aa10.58□□□□□ -0.72
CSTF3-201ENST00000323959 CLTCL1P53675 1640 aa10.58□□□□□ -0.72
CSTF3-201ENST00000323959 TCP11L2Q8N4U5 519 aa10.57□□□□□ -0.72
CSTF3-201ENST00000323959 IFT172Q9UG01 1749 aa10.57□□□□□ -0.72
CSTF3-201ENST00000323959 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
CSTF3-201ENST00000323959 KNDC1Q76NI1 1749 aa10.57□□□□□ -0.72
CSTF3-201ENST00000323959 PMFBP1Q8TBY8 1022 aa10.56□□□□□ -0.72
CSTF3-201ENST00000323959 CD2APQ9Y5K6 639 aa10.56□□□□□ -0.72
CSTF3-201ENST00000323959 AKAP12Q02952 1782 aa10.56□□□□□ -0.72
CSTF3-201ENST00000323959 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
CSTF3-201ENST00000323959 RRP7BPQ9NSQ0 103 aa10.55□□□□□ -0.72
CSTF3-201ENST00000323959 PHF8Q9UPP1 1060 aa10.55□□□□□ -0.72
CSTF3-201ENST00000323959 ANKRD30AQ9BXX3 1397 aa10.55□□□□□ -0.72
CSTF3-201ENST00000323959 SMC1BQ8NDV3 1235 aa10.54□□□□□ -0.72
CSTF3-201ENST00000323959 PLEKHG2Q9H7P9 1386 aa10.54□□□□□ -0.72
CSTF3-201ENST00000323959 WNK3Q9BYP7 1800 aa10.54□□□□□ -0.72
CSTF3-201ENST00000323959 PHRF1Q9P1Y6 1649 aaKnown RBP10.54□□□□□ -0.72
CSTF3-201ENST00000323959 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
CSTF3-201ENST00000323959 NHSQ6T4R5 1651 aa10.54□□□□□ -0.72
CSTF3-201ENST00000323959 AIDAQ96BJ3 306 aa10.54□□□□□ -0.72
CSTF3-201ENST00000323959 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
CSTF3-201ENST00000323959 FOXN1O15353 648 aa10.53□□□□□ -0.72
CSTF3-201ENST00000323959 TRPM1Q7Z4N2 1603 aa10.52□□□□□ -0.72
CSTF3-201ENST00000323959 LMO7Q8WWI1 1683 aa10.52□□□□□ -0.73
CSTF3-201ENST00000323959 LMOD2Q6P5Q4 547 aa10.51□□□□□ -0.73
CSTF3-201ENST00000323959 NMRK2Q9NPI5 230 aa10.51□□□□□ -0.73
CSTF3-201ENST00000323959 GCC1Q96CN9 775 aa10.5□□□□□ -0.73
CSTF3-201ENST00000323959 TUBGCP6Q96RT7 1819 aa10.5□□□□□ -0.73
CSTF3-201ENST00000323959 PIK3C2AO00443 1686 aa10.5□□□□□ -0.73
CSTF3-201ENST00000323959 ANKARQ7Z5J8 1434 aa10.5□□□□□ -0.73
CSTF3-201ENST00000323959 STRN4Q9NRL3 753 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms