RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
SRRM1-201ENST00000323848 GNAI1P63096 354 aa17.1■□□□□ 0.33
SRRM1-201ENST00000323848 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
SRRM1-201ENST00000323848 ASXL1Q8IXJ9 1541 aa17.1■□□□□ 0.33
SRRM1-201ENST00000323848 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
SRRM1-201ENST00000323848 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
SRRM1-201ENST00000323848 ZMYM3Q14202 1370 aa17.09■□□□□ 0.33
SRRM1-201ENST00000323848 TEFQ10587 303 aa17.08■□□□□ 0.33
SRRM1-201ENST00000323848 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
SRRM1-201ENST00000323848 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
SRRM1-201ENST00000323848 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
SRRM1-201ENST00000323848 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
SRRM1-201ENST00000323848 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
SRRM1-201ENST00000323848 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
SRRM1-201ENST00000323848 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
SRRM1-201ENST00000323848 LTKP29376 864 aa17.06■□□□□ 0.32
SRRM1-201ENST00000323848 TSPYL6Q8N831 410 aa17.06■□□□□ 0.32
SRRM1-201ENST00000323848 PCDHB15Q9Y5E8 787 aa17.06■□□□□ 0.32
SRRM1-201ENST00000323848 TRIM27P14373 513 aa17.06■□□□□ 0.32
SRRM1-201ENST00000323848 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
SRRM1-201ENST00000323848 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
SRRM1-201ENST00000323848 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
SRRM1-201ENST00000323848 FCHSD2O94868 740 aa17.05■□□□□ 0.32
SRRM1-201ENST00000323848 F6X3S4 739 aa17.05■□□□□ 0.32
SRRM1-201ENST00000323848 PDE3AQ14432 1141 aa17.05■□□□□ 0.32
SRRM1-201ENST00000323848 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
SRRM1-201ENST00000323848 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
SRRM1-201ENST00000323848 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
SRRM1-201ENST00000323848 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
SRRM1-201ENST00000323848 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
SRRM1-201ENST00000323848 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
SRRM1-201ENST00000323848 ANKRD36BQ8N2N9 1353 aa17.03■□□□□ 0.32
SRRM1-201ENST00000323848 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
SRRM1-201ENST00000323848 RILPL2Q969X0 211 aa17.03■□□□□ 0.32
SRRM1-201ENST00000323848 TNRQ92752 1358 aa17.03■□□□□ 0.32
SRRM1-201ENST00000323848 KCNA6P17658 529 aa17.03■□□□□ 0.32
SRRM1-201ENST00000323848 FOXD4L6Q3SYB3 417 aaPredicted RBP17.03■□□□□ 0.32
SRRM1-201ENST00000323848 FOXD4L3Q6VB84 417 aaPredicted RBP17.03■□□□□ 0.32
SRRM1-201ENST00000323848 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.32
SRRM1-201ENST00000323848 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.32
SRRM1-201ENST00000323848 ZFYVE16Q7Z3T8 1539 aa17.02■□□□□ 0.32
SRRM1-201ENST00000323848 HSCBQ8IWL3 235 aa17.02■□□□□ 0.32
SRRM1-201ENST00000323848 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
SRRM1-201ENST00000323848 KIF16BQ96L93 1317 aa17.01■□□□□ 0.31
SRRM1-201ENST00000323848 PTPRTO14522 1441 aa17.01■□□□□ 0.31
SRRM1-201ENST00000323848 ANXA1P04083 346 aa17.01■□□□□ 0.31
SRRM1-201ENST00000323848 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
SRRM1-201ENST00000323848 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
SRRM1-201ENST00000323848 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
SRRM1-201ENST00000323848 HSPA2P54652 639 aa16.99■□□□□ 0.31
SRRM1-201ENST00000323848 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
SRRM1-201ENST00000323848 ATF3P18847 181 aa16.99■□□□□ 0.31
SRRM1-201ENST00000323848 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
SRRM1-201ENST00000323848 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
SRRM1-201ENST00000323848 CASC1Q6TDU7 716 aa16.98■□□□□ 0.31
SRRM1-201ENST00000323848 KCNJ4P48050 445 aa16.97■□□□□ 0.31
SRRM1-201ENST00000323848 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
SRRM1-201ENST00000323848 METP08581 1390 aa16.96■□□□□ 0.31
SRRM1-201ENST00000323848 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
SRRM1-201ENST00000323848 TTC21BQ7Z4L5 1316 aa16.96■□□□□ 0.31
SRRM1-201ENST00000323848 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
SRRM1-201ENST00000323848 SYTL4Q96C24 671 aaPredicted RBP16.96■□□□□ 0.31
SRRM1-201ENST00000323848 EIF2AK4Q9P2K8 1649 aaKnown RBP16.96■□□□□ 0.3
SRRM1-201ENST00000323848 MPRIPQ6WCQ1 1025 aa16.95■□□□□ 0.3
SRRM1-201ENST00000323848 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
SRRM1-201ENST00000323848 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
SRRM1-201ENST00000323848 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
SRRM1-201ENST00000323848 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
SRRM1-201ENST00000323848 CROCC2H7BZ55 1655 aa16.94■□□□□ 0.3
SRRM1-201ENST00000323848 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
SRRM1-201ENST00000323848 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
SRRM1-201ENST00000323848 LRRC59Q96AG4 307 aaKnown RBP16.94■□□□□ 0.3
SRRM1-201ENST00000323848 PHF8Q9UPP1 1060 aa16.94■□□□□ 0.3
SRRM1-201ENST00000323848 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
SRRM1-201ENST00000323848 SEC24BO95487 1268 aa16.93■□□□□ 0.3
SRRM1-201ENST00000323848 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
SRRM1-201ENST00000323848 NAP1L2Q9ULW6 460 aaPredicted RBP16.93■□□□□ 0.3
SRRM1-201ENST00000323848 POLR3AO14802 1390 aaPredicted RBP16.93■□□□□ 0.3
SRRM1-201ENST00000323848 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
SRRM1-201ENST00000323848 TSHZ3Q63HK5 1081 aa16.93■□□□□ 0.3
SRRM1-201ENST00000323848 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
SRRM1-201ENST00000323848 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
SRRM1-201ENST00000323848 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
SRRM1-201ENST00000323848 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
SRRM1-201ENST00000323848 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
SRRM1-201ENST00000323848 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
SRRM1-201ENST00000323848 RAPGEF4Q8WZA2 1011 aa16.91■□□□□ 0.3
SRRM1-201ENST00000323848 TRPM2O94759 1503 aa16.91■□□□□ 0.3
SRRM1-201ENST00000323848 HMMRO75330 724 aa16.91■□□□□ 0.3
SRRM1-201ENST00000323848 IL1RAPL2Q9NP60 686 aa16.91■□□□□ 0.3
SRRM1-201ENST00000323848 MYL6BP14649 208 aa16.9■□□□□ 0.3
SRRM1-201ENST00000323848 EVA1CP58658 441 aa16.9■□□□□ 0.3
SRRM1-201ENST00000323848 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
SRRM1-201ENST00000323848 ORAI2Q96SN7 254 aa16.9■□□□□ 0.3
SRRM1-201ENST00000323848 PIP4K2AP48426 406 aaPredicted RBP16.89■□□□□ 0.29
SRRM1-201ENST00000323848 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.29
SRRM1-201ENST00000323848 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
SRRM1-201ENST00000323848 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
SRRM1-201ENST00000323848 RSPH6AQ9H0K4 717 aa16.88■□□□□ 0.29
SRRM1-201ENST00000323848 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms