RNA–Protein interactions for RNA: ENST00000323578.12

CHID1-201, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHID1, Length 3,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-201ENST00000323578 NME9Q86XW9 330 aa20.22■□□□□ 0.83
CHID1-201ENST00000323578 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
CHID1-201ENST00000323578 PLEKHF1Q96S99 279 aa20.21■□□□□ 0.83
CHID1-201ENST00000323578 TXNDC2Q86VQ3 553 aa20.2■□□□□ 0.82
CHID1-201ENST00000323578 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
CHID1-201ENST00000323578 KRT24Q2M2I5 525 aa20.2■□□□□ 0.82
CHID1-201ENST00000323578 ZNF518AQ6AHZ1 1483 aa20.2■□□□□ 0.82
CHID1-201ENST00000323578 MCM4P33991 863 aa20.19■□□□□ 0.82
CHID1-201ENST00000323578 CCDC27Q2M243 656 aa20.19■□□□□ 0.82
CHID1-201ENST00000323578 NINLQ9Y2I6 1382 aa20.19■□□□□ 0.82
CHID1-201ENST00000323578 KIF1BO60333 1816 aa20.19■□□□□ 0.82
CHID1-201ENST00000323578 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
CHID1-201ENST00000323578 GOLGA6L3A6NEY3 463 aa20.18■□□□□ 0.82
CHID1-201ENST00000323578 ANTXR1Q9H6X2 564 aa20.18■□□□□ 0.82
CHID1-201ENST00000323578 TPRNQ4KMQ1 711 aa20.18■□□□□ 0.82
CHID1-201ENST00000323578 TRAK2O60296 914 aa20.18■□□□□ 0.82
CHID1-201ENST00000323578 MROH2AA6NES4 1674 aa20.18■□□□□ 0.82
CHID1-201ENST00000323578 CHD1LQ86WJ1 897 aa20.17■□□□□ 0.82
CHID1-201ENST00000323578 ZBTB40Q9NUA8 1239 aa20.17■□□□□ 0.82
CHID1-201ENST00000323578 MYOM2P54296 1465 aa20.17■□□□□ 0.82
CHID1-201ENST00000323578 MIS18AQ9NYP9 233 aa20.16■□□□□ 0.82
CHID1-201ENST00000323578 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
CHID1-201ENST00000323578 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
CHID1-201ENST00000323578 NCLP19338 710 aaKnown RBP20.16■□□□□ 0.82
CHID1-201ENST00000323578 CHMP5Q9NZZ3 219 aa20.16■□□□□ 0.82
CHID1-201ENST00000323578 PPRC1Q5VV67 1664 aaKnown RBP20.16■□□□□ 0.82
CHID1-201ENST00000323578 UHRF1BP1LA0JNW5 1464 aa20.15■□□□□ 0.82
CHID1-201ENST00000323578 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
CHID1-201ENST00000323578 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
CHID1-201ENST00000323578 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
CHID1-201ENST00000323578 EFCAB6Q5THR3 1501 aa20.14■□□□□ 0.82
CHID1-201ENST00000323578 C16orf71Q8IYS4 520 aaPredicted RBP20.14■□□□□ 0.81
CHID1-201ENST00000323578 SBNO2Q9Y2G9 1366 aa20.14■□□□□ 0.81
CHID1-201ENST00000323578 C8orf58Q8NAV2 365 aa20.14■□□□□ 0.81
CHID1-201ENST00000323578 NECTIN2Q92692 538 aa20.14■□□□□ 0.81
CHID1-201ENST00000323578 KIF16BQ96L93 1317 aa20.13■□□□□ 0.81
CHID1-201ENST00000323578 XRCC6P12956 609 aaKnown RBP eCLIP20.13■□□□□ 0.81
CHID1-201ENST00000323578 TWISTNBQ3B726 338 aaPredicted RBP20.13■□□□□ 0.81
CHID1-201ENST00000323578 SLC4A10Q6U841 1118 aa20.12■□□□□ 0.81
CHID1-201ENST00000323578 MBIPQ9NS73 344 aa20.12■□□□□ 0.81
CHID1-201ENST00000323578 RRAGDQ9NQL2 400 aaPredicted RBP20.11■□□□□ 0.81
CHID1-201ENST00000323578 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
CHID1-201ENST00000323578 CD2BP2O95400 341 aaKnown RBP20.11■□□□□ 0.81
CHID1-201ENST00000323578 HDAC1Q13547 482 aaPredicted RBP20.11■□□□□ 0.81
CHID1-201ENST00000323578 SMC5Q8IY18 1101 aa20.11■□□□□ 0.81
CHID1-201ENST00000323578 AEBP1Q8IUX7 1158 aa20.1■□□□□ 0.81
CHID1-201ENST00000323578 L1TD1Q5T7N2 865 aaKnown RBP20.1■□□□□ 0.81
CHID1-201ENST00000323578 MCM10Q7L590 875 aa20.1■□□□□ 0.81
CHID1-201ENST00000323578 NAP1L5Q96NT1 182 aaPredicted RBP20.1■□□□□ 0.81
CHID1-201ENST00000323578 FCHSD2O94868 740 aa20.09■□□□□ 0.81
CHID1-201ENST00000323578 NOL8Q76FK4 1167 aaKnown RBP20.09■□□□□ 0.81
CHID1-201ENST00000323578 PNNQ9H307 717 aaKnown RBP20.09■□□□□ 0.81
CHID1-201ENST00000323578 MROH1Q8NDA8 1641 aa20.09■□□□□ 0.81
CHID1-201ENST00000323578 VAMP4O75379 141 aa20.09■□□□□ 0.81
CHID1-201ENST00000323578 NUCB1Q02818 461 aa20.09■□□□□ 0.81
CHID1-201ENST00000323578 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
CHID1-201ENST00000323578 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
CHID1-201ENST00000323578 AAMPQ13685 434 aa20.08■□□□□ 0.81
CHID1-201ENST00000323578 SLC52A1Q9NWF4 448 aa20.08■□□□□ 0.81
CHID1-201ENST00000323578 GLIPR1L2Q4G1C9 344 aa20.08■□□□□ 0.8
CHID1-201ENST00000323578 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.8
CHID1-201ENST00000323578 INO80Q9ULG1 1556 aaPredicted RBP20.08■□□□□ 0.8
CHID1-201ENST00000323578 NFE2L2Q16236 605 aa20.08■□□□□ 0.8
CHID1-201ENST00000323578 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.8
CHID1-201ENST00000323578 OTUD7AQ8TE49 926 aaPredicted RBP20.07■□□□□ 0.8
CHID1-201ENST00000323578 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
CHID1-201ENST00000323578 TBC1D9Q6ZT07 1266 aa20.07■□□□□ 0.8
CHID1-201ENST00000323578 KIDINS220Q9ULH0 1771 aa20.07■□□□□ 0.8
CHID1-201ENST00000323578 SULT6B1Q6IMI4 303 aa20.06■□□□□ 0.8
CHID1-201ENST00000323578 COG3Q96JB2 828 aa20.06■□□□□ 0.8
CHID1-201ENST00000323578 YEATS2Q9ULM3 1422 aa20.06■□□□□ 0.8
CHID1-201ENST00000323578 IQSEC2Q5JU85 1478 aa20.06■□□□□ 0.8
CHID1-201ENST00000323578 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
CHID1-201ENST00000323578 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
CHID1-201ENST00000323578 ABCC11Q96J66 1382 aa20.06■□□□□ 0.8
CHID1-201ENST00000323578 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
CHID1-201ENST00000323578 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
CHID1-201ENST00000323578 FOXD4L6Q3SYB3 417 aaPredicted RBP20.05■□□□□ 0.8
CHID1-201ENST00000323578 FOXD4L3Q6VB84 417 aaPredicted RBP20.05■□□□□ 0.8
CHID1-201ENST00000323578 MRPL50Q8N5N7 158 aaKnown RBP20.04■□□□□ 0.8
CHID1-201ENST00000323578 GNAI1P63096 354 aa20.04■□□□□ 0.8
CHID1-201ENST00000323578 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
CHID1-201ENST00000323578 SIRT2Q8IXJ6 389 aa20.04■□□□□ 0.8
CHID1-201ENST00000323578 DEPDC5O75140 1603 aa20.03■□□□□ 0.8
CHID1-201ENST00000323578 CT47B1P0C2W7 299 aaPredicted RBP20.03■□□□□ 0.8
CHID1-201ENST00000323578 ADGRB1O14514 1584 aa20.03■□□□□ 0.8
CHID1-201ENST00000323578 VWDEQ8N2E2 1590 aa20.03■□□□□ 0.8
CHID1-201ENST00000323578 ADGRB3O60242 1522 aa20.03■□□□□ 0.8
CHID1-201ENST00000323578 SHPRHQ149N8 1683 aa20.03■□□□□ 0.8
CHID1-201ENST00000323578 POGZQ7Z3K3 1410 aa20.03■□□□□ 0.8
CHID1-201ENST00000323578 ZBTB7CA1YPR0 619 aa20.02■□□□□ 0.8
CHID1-201ENST00000323578 SSFA2P28290 1259 aa20.02■□□□□ 0.8
CHID1-201ENST00000323578 NUTM2GQ5VZR2 741 aa20.02■□□□□ 0.8
CHID1-201ENST00000323578 CHAMP1Q96JM3 812 aa20.01■□□□□ 0.79
CHID1-201ENST00000323578 NSD2O96028 1365 aa20.01■□□□□ 0.79
CHID1-201ENST00000323578 F6X3S4 739 aa20.01■□□□□ 0.79
CHID1-201ENST00000323578 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
CHID1-201ENST00000323578 YTHDC2Q9H6S0 1430 aaKnown RBP20.01■□□□□ 0.79
CHID1-201ENST00000323578 GLI2P10070 1586 aa20.01■□□□□ 0.79
CHID1-201ENST00000323578 NUDT16Q96DE0 195 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms