RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 PDE3BQ13370 1112 aa11.95□□□□□ -0.5
CD46-202ENST00000322918 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 SETD1AO15047 1707 aaKnown RBP11.94□□□□□ -0.5
CD46-202ENST00000322918 MSH5O43196 834 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 DUSP27Q5VZP5 1158 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 PPP4R2Q9NY27 417 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
CD46-202ENST00000322918 MAPK8IP3Q9UPT6 1336 aa11.94□□□□□ -0.5
CD46-202ENST00000322918 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
CD46-202ENST00000322918 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
CD46-202ENST00000322918 BCAR3O75815 825 aa11.92□□□□□ -0.5
CD46-202ENST00000322918 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
CD46-202ENST00000322918 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
CD46-202ENST00000322918 DLC1Q96QB1 1528 aa11.92□□□□□ -0.5
CD46-202ENST00000322918 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
CD46-202ENST00000322918 SLFN5Q08AF3 891 aa11.91□□□□□ -0.5
CD46-202ENST00000322918 FRAT1Q92837 279 aaPredicted RBP11.91□□□□□ -0.5
CD46-202ENST00000322918 TSR2Q969E8 191 aaKnown RBP11.91□□□□□ -0.5
CD46-202ENST00000322918 NSD2O96028 1365 aa11.91□□□□□ -0.5
CD46-202ENST00000322918 NLRP6P59044 892 aa11.91□□□□□ -0.5
CD46-202ENST00000322918 LTV1Q96GA3 475 aaPredicted RBP11.91□□□□□ -0.5
CD46-202ENST00000322918 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
CD46-202ENST00000322918 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
CD46-202ENST00000322918 CPS1P31327 1500 aa11.9□□□□□ -0.5
CD46-202ENST00000322918 ATP7BP35670 1465 aa11.9□□□□□ -0.5
CD46-202ENST00000322918 CANXP27824 592 aaKnown RBP11.9□□□□□ -0.5
CD46-202ENST00000322918 RIPK4P57078 832 aa11.9□□□□□ -0.5
CD46-202ENST00000322918 PROSER2Q86WR7 435 aaPredicted RBP11.9□□□□□ -0.5
CD46-202ENST00000322918 SIRT1Q96EB6 747 aa11.9□□□□□ -0.5
CD46-202ENST00000322918 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.9□□□□□ -0.5
CD46-202ENST00000322918 ARHGAP23Q9P227 1491 aa11.9□□□□□ -0.51
CD46-202ENST00000322918 TECPR2O15040 1411 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 SLIT1O75093 1534 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 FOXO3O43524 673 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 PHACTR3Q96KR7 559 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 CRBNQ96SW2 442 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
CD46-202ENST00000322918 NEFMP07197 916 aa11.89□□□□□ -0.51
CD46-202ENST00000322918 ZNF521Q96K83 1311 aa11.88□□□□□ -0.51
CD46-202ENST00000322918 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
CD46-202ENST00000322918 ORAI2Q96SN7 254 aa11.88□□□□□ -0.51
CD46-202ENST00000322918 CPSF1Q10570 1443 aaKnown RBP11.88□□□□□ -0.51
CD46-202ENST00000322918 MED14O60244 1454 aa11.87□□□□□ -0.51
CD46-202ENST00000322918 E9PSI1 815 aa11.87□□□□□ -0.51
CD46-202ENST00000322918 SKAP1Q86WV1 359 aa11.87□□□□□ -0.51
CD46-202ENST00000322918 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
CD46-202ENST00000322918 PSME1Q06323 249 aa11.87□□□□□ -0.51
CD46-202ENST00000322918 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
CD46-202ENST00000322918 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
CD46-202ENST00000322918 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
CD46-202ENST00000322918 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
CD46-202ENST00000322918 AMPHP49418 695 aa11.86□□□□□ -0.51
CD46-202ENST00000322918 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
CD46-202ENST00000322918 PLEKHG3A1L390 1219 aa11.86□□□□□ -0.51
CD46-202ENST00000322918 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
CD46-202ENST00000322918 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
CD46-202ENST00000322918 PHF8Q9UPP1 1060 aa11.85□□□□□ -0.51
CD46-202ENST00000322918 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
CD46-202ENST00000322918 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
CD46-202ENST00000322918 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
CD46-202ENST00000322918 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
CD46-202ENST00000322918 TNNQ9UQP3 1299 aa11.84□□□□□ -0.51
CD46-202ENST00000322918 USP6P35125 1406 aa11.84□□□□□ -0.51
CD46-202ENST00000322918 RNF123Q5XPI4 1314 aa11.83□□□□□ -0.52
CD46-202ENST00000322918 EIF4A2Q14240 407 aaKnown RBP11.83□□□□□ -0.52
CD46-202ENST00000322918 IL13P35225 146 aa11.83□□□□□ -0.52
CD46-202ENST00000322918 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
CD46-202ENST00000322918 SHPRHQ149N8 1683 aa11.83□□□□□ -0.52
CD46-202ENST00000322918 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
CD46-202ENST00000322918 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
CD46-202ENST00000322918 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
CD46-202ENST00000322918 PANK1Q8TE04 598 aa11.82□□□□□ -0.52
CD46-202ENST00000322918 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
CD46-202ENST00000322918 CDC42BPGQ6DT37 1551 aa11.82□□□□□ -0.52
CD46-202ENST00000322918 ADAMTSL3P82987 1691 aa11.82□□□□□ -0.52
CD46-202ENST00000322918 SETD1BQ9UPS6 1966 aaKnown RBP11.82□□□□□ -0.52
CD46-202ENST00000322918 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
CD46-202ENST00000322918 RGPD8O14715 1765 aaPredicted RBP11.81□□□□□ -0.52
CD46-202ENST00000322918 USP32Q8NFA0 1604 aa11.81□□□□□ -0.52
CD46-202ENST00000322918 FCHSD2O94868 740 aa11.81□□□□□ -0.52
CD46-202ENST00000322918 PTCH1Q13635 1447 aa11.81□□□□□ -0.52
CD46-202ENST00000322918 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
CD46-202ENST00000322918 COG6Q9Y2V7 657 aa11.8□□□□□ -0.52
CD46-202ENST00000322918 INSRP06213 1382 aa11.8□□□□□ -0.52
CD46-202ENST00000322918 KDM4FA0A1W2PPD8 638 aa11.8□□□□□ -0.52
CD46-202ENST00000322918 TRMT2AQ8IZ69 625 aaKnown RBP11.8□□□□□ -0.52
CD46-202ENST00000322918 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
CD46-202ENST00000322918 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
CD46-202ENST00000322918 KNDC1Q76NI1 1749 aa11.79□□□□□ -0.52
CD46-202ENST00000322918 MCM10Q7L590 875 aa11.79□□□□□ -0.52
CD46-202ENST00000322918 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
CD46-202ENST00000322918 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
CD46-202ENST00000322918 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
CD46-202ENST00000322918 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms