RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 ZRANB1Q9UGI0 708 aa26.34■■□□□ 1.81
PDZD3-201ENST00000322712 CPSF1Q10570 1443 aaKnown RBP26.34■■□□□ 1.81
PDZD3-201ENST00000322712 CCDC61Q9Y6R9 512 aa26.34■■□□□ 1.81
PDZD3-201ENST00000322712 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.33■■□□□ 1.81
PDZD3-201ENST00000322712 U2SURPO15042 1029 aaKnown RBP26.33■■□□□ 1.81
PDZD3-201ENST00000322712 C20orf194Q5TEA3 1177 aa26.33■■□□□ 1.81
PDZD3-201ENST00000322712 IQSEC2Q5JU85 1478 aa26.33■■□□□ 1.81
PDZD3-201ENST00000322712 NME9Q86XW9 330 aa26.33■■□□□ 1.8
PDZD3-201ENST00000322712 COL3A1P02461 1466 aaPredicted RBP26.32■■□□□ 1.8
PDZD3-201ENST00000322712 ANKLE2Q86XL3 938 aa26.31■■□□□ 1.8
PDZD3-201ENST00000322712 TBX22Q9Y458 520 aa26.31■■□□□ 1.8
PDZD3-201ENST00000322712 E9PSI1 815 aa26.3■■□□□ 1.8
PDZD3-201ENST00000322712 PPM1GO15355 546 aaPredicted RBP26.3■■□□□ 1.8
PDZD3-201ENST00000322712 AMOTL2Q9Y2J4 779 aa26.3■■□□□ 1.8
PDZD3-201ENST00000322712 NGEFQ8N5V2 710 aa26.28■■□□□ 1.8
PDZD3-201ENST00000322712 ANP32EQ9BTT0 268 aa26.28■■□□□ 1.8
PDZD3-201ENST00000322712 RBM19Q9Y4C8 960 aaKnown RBP26.28■■□□□ 1.8
PDZD3-201ENST00000322712 CRBNQ96SW2 442 aa26.27■■□□□ 1.8
PDZD3-201ENST00000322712 NKTRP30414 1462 aaKnown RBP26.27■■□□□ 1.8
PDZD3-201ENST00000322712 EDC4Q6P2E9 1401 aaKnown RBP26.27■■□□□ 1.8
PDZD3-201ENST00000322712 DIP2AQ14689 1571 aa26.27■■□□□ 1.8
PDZD3-201ENST00000322712 POLKQ9UBT6 870 aa26.27■■□□□ 1.8
PDZD3-201ENST00000322712 CDC42BPGQ6DT37 1551 aa26.26■■□□□ 1.79
PDZD3-201ENST00000322712 PHF23Q9BUL5 403 aaPredicted RBP26.25■■□□□ 1.79
PDZD3-201ENST00000322712 PLEKHF1Q96S99 279 aa26.24■■□□□ 1.79
PDZD3-201ENST00000322712 PNPLA6Q8IY17 1366 aa26.24■■□□□ 1.79
PDZD3-201ENST00000322712 DIAPH1O60610 1272 aaKnown RBP26.23■■□□□ 1.79
PDZD3-201ENST00000322712 BCAR3O75815 825 aa26.23■■□□□ 1.79
PDZD3-201ENST00000322712 EMILIN1Q9Y6C2 1016 aa26.22■■□□□ 1.79
PDZD3-201ENST00000322712 MAP2P11137 1827 aaKnown RBP26.21■■□□□ 1.79
PDZD3-201ENST00000322712 MON2Q7Z3U7 1717 aa26.21■■□□□ 1.79
PDZD3-201ENST00000322712 ADGRB2O60241 1585 aa26.2■■□□□ 1.78
PDZD3-201ENST00000322712 ACEP12821 1306 aa26.19■■□□□ 1.78
PDZD3-201ENST00000322712 AKAP12Q02952 1782 aa26.19■■□□□ 1.78
PDZD3-201ENST00000322712 ITSN1Q15811 1721 aa26.18■■□□□ 1.78
PDZD3-201ENST00000322712 RRS1Q15050 365 aaKnown RBP26.18■■□□□ 1.78
PDZD3-201ENST00000322712 CCDC27Q2M243 656 aa26.17■■□□□ 1.78
PDZD3-201ENST00000322712 COG3Q96JB2 828 aa26.16■■□□□ 1.78
PDZD3-201ENST00000322712 ZNF692Q9BU19 519 aaPredicted RBP26.16■■□□□ 1.78
PDZD3-201ENST00000322712 WDR63Q8IWG1 891 aa26.16■■□□□ 1.78
PDZD3-201ENST00000322712 PTCH1Q13635 1447 aa26.15■■□□□ 1.78
PDZD3-201ENST00000322712 KCNA6P17658 529 aa26.15■■□□□ 1.78
PDZD3-201ENST00000322712 TMPOP42166 694 aaKnown RBP26.15■■□□□ 1.78
PDZD3-201ENST00000322712 XRN1Q8IZH2 1706 aaKnown RBP26.15■■□□□ 1.78
PDZD3-201ENST00000322712 PMFBP1Q8TBY8 1022 aa26.14■■□□□ 1.78
PDZD3-201ENST00000322712 KDM4FA0A1W2PPD8 638 aa26.14■■□□□ 1.77
PDZD3-201ENST00000322712 NPHP4O75161 1426 aaPredicted RBP26.13■■□□□ 1.77
PDZD3-201ENST00000322712 PIK3R4Q99570 1358 aa26.13■■□□□ 1.77
PDZD3-201ENST00000322712 TOPAZ1Q8N9V7 1692 aa26.13■■□□□ 1.77
PDZD3-201ENST00000322712 MAPK8IP3Q9UPT6 1336 aa26.13■■□□□ 1.77
PDZD3-201ENST00000322712 PLEKHG3A1L390 1219 aa26.12■■□□□ 1.77
PDZD3-201ENST00000322712 TRIM35Q9UPQ4 493 aa26.12■■□□□ 1.77
PDZD3-201ENST00000322712 TTC21BQ7Z4L5 1316 aa26.12■■□□□ 1.77
PDZD3-201ENST00000322712 HMOX1P09601 288 aa26.11■■□□□ 1.77
PDZD3-201ENST00000322712 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.1■■□□□ 1.77
PDZD3-201ENST00000322712 CHD2O14647 1828 aaKnown RBP26.09■■□□□ 1.77
PDZD3-201ENST00000322712 RGPD8O14715 1765 aaPredicted RBP26.09■■□□□ 1.77
PDZD3-201ENST00000322712 PRKAR2BP31323 418 aa26.09■■□□□ 1.77
PDZD3-201ENST00000322712 LRRC7Q96NW7 1537 aa26.09■■□□□ 1.77
PDZD3-201ENST00000322712 TSR2Q969E8 191 aaKnown RBP26.08■■□□□ 1.77
PDZD3-201ENST00000322712 RSPH6AQ9H0K4 717 aa26.08■■□□□ 1.77
PDZD3-201ENST00000322712 AATKQ6ZMQ8 1374 aa26.08■■□□□ 1.77
PDZD3-201ENST00000322712 IL13P35225 146 aa26.08■■□□□ 1.77
PDZD3-201ENST00000322712 RIPK4P57078 832 aa26.08■■□□□ 1.77
PDZD3-201ENST00000322712 RBM33Q96EV2 1170 aaKnown RBP26.08■■□□□ 1.77
PDZD3-201ENST00000322712 USP6P35125 1406 aa26.08■■□□□ 1.76
PDZD3-201ENST00000322712 NRKQ7Z2Y5 1582 aa26.07■■□□□ 1.76
PDZD3-201ENST00000322712 FCHSD2O94868 740 aa26.07■■□□□ 1.76
PDZD3-201ENST00000322712 PHACTR3Q96KR7 559 aa26.06■■□□□ 1.76
PDZD3-201ENST00000322712 BCL2L13Q9BXK5 485 aa26.06■■□□□ 1.76
PDZD3-201ENST00000322712 SOX12O15370 315 aa26.05■■□□□ 1.76
PDZD3-201ENST00000322712 NCBP3Q53F19 620 aaKnown RBP26.05■■□□□ 1.76
PDZD3-201ENST00000322712 CDK12Q9NYV4 1490 aaPredicted RBP26.04■■□□□ 1.76
PDZD3-201ENST00000322712 RARSP54136 660 aaKnown RBP26.04■■□□□ 1.76
PDZD3-201ENST00000322712 SKAP1Q86WV1 359 aa26.04■■□□□ 1.76
PDZD3-201ENST00000322712 HSPA2P54652 639 aa26.04■■□□□ 1.76
PDZD3-201ENST00000322712 MYH16Q9H6N6 1097 aa26.04■■□□□ 1.76
PDZD3-201ENST00000322712 FRAT1Q92837 279 aaPredicted RBP26.03■■□□□ 1.76
PDZD3-201ENST00000322712 FANCIQ9NVI1 1328 aa26.03■■□□□ 1.76
PDZD3-201ENST00000322712 NGDNQ8NEJ9 315 aaKnown RBP26.02■■□□□ 1.76
PDZD3-201ENST00000322712 OVOS2A0A0J9YW53 1432 aa26■■□□□ 1.75
PDZD3-201ENST00000322712 OVOS2Q6IE36 1432 aa26■■□□□ 1.75
PDZD3-201ENST00000322712 SSH2Q76I76 1423 aa26■■□□□ 1.75
PDZD3-201ENST00000322712 PANK1Q8TE04 598 aa26■■□□□ 1.75
PDZD3-201ENST00000322712 PNNQ9H307 717 aaKnown RBP26■■□□□ 1.75
PDZD3-201ENST00000322712 CANXP27824 592 aaKnown RBP25.99■■□□□ 1.75
PDZD3-201ENST00000322712 TNNQ9UQP3 1299 aa25.99■■□□□ 1.75
PDZD3-201ENST00000322712 EXOSC9Q06265 439 aaKnown RBP25.98■■□□□ 1.75
PDZD3-201ENST00000322712 THUMPD2Q9BTF0 503 aaKnown RBP25.96■■□□□ 1.75
PDZD3-201ENST00000322712 COG6Q9Y2V7 657 aa25.95■■□□□ 1.75
PDZD3-201ENST00000322712 HSP90AB2PQ58FF8 381 aa25.95■■□□□ 1.74
PDZD3-201ENST00000322712 NALCNQ8IZF0 1738 aa25.94■■□□□ 1.74
PDZD3-201ENST00000322712 EIF4A2Q14240 407 aaKnown RBP25.94■■□□□ 1.74
PDZD3-201ENST00000322712 NEFMP07197 916 aa25.94■■□□□ 1.74
PDZD3-201ENST00000322712 PDE3AQ14432 1141 aa25.93■■□□□ 1.74
PDZD3-201ENST00000322712 NFE2L2Q16236 605 aa25.93■■□□□ 1.74
PDZD3-201ENST00000322712 AEBP1Q8IUX7 1158 aa25.93■■□□□ 1.74
PDZD3-201ENST00000322712 KDM2BQ8NHM5 1336 aa25.93■■□□□ 1.74
PDZD3-201ENST00000322712 RLBP1P12271 317 aa25.92■■□□□ 1.74
PDZD3-201ENST00000322712 PEAK1Q9H792 1746 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms