RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.46
EEA1-201ENST00000322349 CNTROBQ8N137 903 aa12.21□□□□□ -0.46
EEA1-201ENST00000322349 FKBP4Q02790 459 aaKnown RBP eCLIP12.21□□□□□ -0.46
EEA1-201ENST00000322349 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
EEA1-201ENST00000322349 SSBP05455 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
EEA1-201ENST00000322349 NEFHP12036 1026 aa12.2□□□□□ -0.46
EEA1-201ENST00000322349 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
EEA1-201ENST00000322349 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
EEA1-201ENST00000322349 SEPT11Q9NVA2 429 aaKnown RBP12.2□□□□□ -0.46
EEA1-201ENST00000322349 MAGEC2Q9UBF1 373 aaPredicted RBP12.2□□□□□ -0.46
EEA1-201ENST00000322349 STK3Q13188 491 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 INTS3Q68E01 1043 aaKnown RBP12.19□□□□□ -0.46
EEA1-201ENST00000322349 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 RAI14Q9P0K7 980 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 CCDC173Q0VFZ6 552 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 ZPR1O75312 459 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 ANKLE2Q86XL3 938 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
EEA1-201ENST00000322349 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 TMOD2Q9NZR1 351 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 RAPGEF2Q9Y4G8 1499 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
EEA1-201ENST00000322349 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
EEA1-201ENST00000322349 CENPQQ7L2Z9 268 aaPredicted RBP12.18□□□□□ -0.46
EEA1-201ENST00000322349 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
EEA1-201ENST00000322349 CCDC57Q2TAC2 916 aa12.18□□□□□ -0.46
EEA1-201ENST00000322349 RDXP35241 583 aaKnown RBP12.18□□□□□ -0.46
EEA1-201ENST00000322349 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
EEA1-201ENST00000322349 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
EEA1-201ENST00000322349 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
EEA1-201ENST00000322349 TXLNAP40222 546 aa12.17□□□□□ -0.46
EEA1-201ENST00000322349 ZNF530Q6P9A1 599 aaPredicted RBP12.17□□□□□ -0.46
EEA1-201ENST00000322349 SDF4Q9BRK5 362 aa12.17□□□□□ -0.46
EEA1-201ENST00000322349 GAS2L2Q8NHY3 880 aa12.17□□□□□ -0.46
EEA1-201ENST00000322349 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.46
EEA1-201ENST00000322349 ANKIB1Q9P2G1 1089 aa12.17□□□□□ -0.46
EEA1-201ENST00000322349 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
EEA1-201ENST00000322349 TTC16Q8NEE8 873 aa12.16□□□□□ -0.46
EEA1-201ENST00000322349 AK7Q96M32 723 aa12.16□□□□□ -0.46
EEA1-201ENST00000322349 C16orf71Q8IYS4 520 aaPredicted RBP12.16□□□□□ -0.46
EEA1-201ENST00000322349 CRACR2BQ8N4Y2 399 aaPredicted RBP12.16□□□□□ -0.46
EEA1-201ENST00000322349 USP47Q96K76 1375 aa12.16□□□□□ -0.46
EEA1-201ENST00000322349 TRMT1LQ7Z2T5 733 aaKnown RBP12.15□□□□□ -0.46
EEA1-201ENST00000322349 PTCD1O75127 700 aaKnown RBP12.15□□□□□ -0.46
EEA1-201ENST00000322349 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
EEA1-201ENST00000322349 AFAP1Q8N556 730 aa12.15□□□□□ -0.46
EEA1-201ENST00000322349 LRP2BPQ9P2M1 347 aa12.15□□□□□ -0.46
EEA1-201ENST00000322349 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
EEA1-201ENST00000322349 PSMA5P28066 241 aa12.15□□□□□ -0.46
EEA1-201ENST00000322349 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
EEA1-201ENST00000322349 DHX37Q8IY37 1157 aaKnown RBP12.15□□□□□ -0.46
EEA1-201ENST00000322349 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.47
EEA1-201ENST00000322349 ZNF644Q9H582 1327 aaPredicted RBP12.15□□□□□ -0.47
EEA1-201ENST00000322349 SSR1P43307 286 aaKnown RBP12.15□□□□□ -0.47
EEA1-201ENST00000322349 TDO2P48775 406 aa12.15□□□□□ -0.47
EEA1-201ENST00000322349 CDK19Q9BWU1 502 aa12.14□□□□□ -0.47
EEA1-201ENST00000322349 LIG1P18858 919 aa12.14□□□□□ -0.47
EEA1-201ENST00000322349 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
EEA1-201ENST00000322349 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
EEA1-201ENST00000322349 SMC2O95347 1197 aa12.14□□□□□ -0.47
EEA1-201ENST00000322349 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
EEA1-201ENST00000322349 ARHGAP5Q13017 1502 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 HDGFL1Q5TGJ6 251 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 PRKAR2BP31323 418 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 IGHMBP2P38935 993 aaKnown RBP12.13□□□□□ -0.47
EEA1-201ENST00000322349 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
EEA1-201ENST00000322349 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
EEA1-201ENST00000322349 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 ZNF622Q969S3 477 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■■□□ 16.4
EEA1-201ENST00000322349 CDR1P51861 262 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
EEA1-201ENST00000322349 SLC4A8Q2Y0W8 1093 aa12.12□□□□□ -0.47
EEA1-201ENST00000322349 MNS1Q8NEH6 495 aa12.12□□□□□ -0.47
EEA1-201ENST00000322349 PSMD1Q99460 953 aa12.12□□□□□ -0.47
EEA1-201ENST00000322349 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
EEA1-201ENST00000322349 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
EEA1-201ENST00000322349 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
EEA1-201ENST00000322349 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
EEA1-201ENST00000322349 RRS1Q15050 365 aaKnown RBP12.11□□□□□ -0.47
EEA1-201ENST00000322349 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
EEA1-201ENST00000322349 CFAP70Q5T0N1 1121 aa12.1□□□□□ -0.47
EEA1-201ENST00000322349 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
EEA1-201ENST00000322349 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
EEA1-201ENST00000322349 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
EEA1-201ENST00000322349 PDE4AP27815 886 aa12.1□□□□□ -0.47
EEA1-201ENST00000322349 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
EEA1-201ENST00000322349 SKOR2Q2VWA4 1001 aaPredicted RBP12.1□□□□□ -0.47
EEA1-201ENST00000322349 FILIP1LQ4L180 1135 aa12.09□□□□□ -0.47
EEA1-201ENST00000322349 NAT10Q9H0A0 1025 aaKnown RBP12.09□□□□□ -0.47
EEA1-201ENST00000322349 DEF6Q9H4E7 631 aa12.09□□□□□ -0.47
EEA1-201ENST00000322349 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.09□□□□□ -0.47
EEA1-201ENST00000322349 STARD3NLO95772 234 aa12.09□□□□□ -0.47
EEA1-201ENST00000322349 CHMP5Q9NZZ3 219 aa12.09□□□□□ -0.47
EEA1-201ENST00000322349 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
EEA1-201ENST00000322349 RAPGEF3O95398 923 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms