RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 PLCH1Q4KWH8 1693 aa30.44■■■□□ 2.46
UBE2D3-201ENST00000321805 NBPF8Q3BBV2 869 aa30.44■■■□□ 2.46
UBE2D3-201ENST00000321805 ACEP12821 1306 aa30.44■■■□□ 2.46
UBE2D3-201ENST00000321805 PPIP5K1Q6PFW1 1433 aa30.42■■■□□ 2.46
UBE2D3-201ENST00000321805 RALGAPBQ86X10 1494 aa30.42■■■□□ 2.46
UBE2D3-201ENST00000321805 PAK3O75914 559 aaPredicted RBP30.41■■■□□ 2.46
UBE2D3-201ENST00000321805 EVC2Q86UK5 1308 aa30.41■■■□□ 2.46
UBE2D3-201ENST00000321805 GJD4Q96KN9 370 aaPredicted RBP30.4■■■□□ 2.46
UBE2D3-201ENST00000321805 BRD4O60885 1362 aaPredicted RBP30.4■■■□□ 2.46
UBE2D3-201ENST00000321805 SBNO2Q9Y2G9 1366 aa30.39■■■□□ 2.45
UBE2D3-201ENST00000321805 CABP2Q9NPB3 220 aa30.38■■■□□ 2.45
UBE2D3-201ENST00000321805 COL14A1Q05707 1796 aaKnown RBP30.37■■■□□ 2.45
UBE2D3-201ENST00000321805 UPF1Q92900 1129 aaKnown RBP eCLIP30.37■■■□□ 2.45
UBE2D3-201ENST00000321805 PLEKHG5O94827 1062 aa30.35■■■□□ 2.45
UBE2D3-201ENST00000321805 GLI3P10071 1580 aa30.35■■■□□ 2.45
UBE2D3-201ENST00000321805 PHRF1Q9P1Y6 1649 aaKnown RBP30.34■■■□□ 2.45
UBE2D3-201ENST00000321805 CARD11Q9BXL7 1154 aa30.34■■■□□ 2.45
UBE2D3-201ENST00000321805 FAM83GA6ND36 823 aa30.33■■■□□ 2.45
UBE2D3-201ENST00000321805 VPS72Q15906 364 aa30.33■■■□□ 2.45
UBE2D3-201ENST00000321805 NRAPQ86VF7 1730 aa30.33■■■□□ 2.45
UBE2D3-201ENST00000321805 ATAD2Q6PL18 1390 aa30.31■■■□□ 2.44
UBE2D3-201ENST00000321805 USP6P35125 1406 aa30.29■■■□□ 2.44
UBE2D3-201ENST00000321805 CABP1Q9NZU7 370 aa30.28■■■□□ 2.44
UBE2D3-201ENST00000321805 ABTB2Q8N961 1025 aa30.26■■■□□ 2.43
UBE2D3-201ENST00000321805 PRDM11Q9NQV5 511 aa30.26■■■□□ 2.43
UBE2D3-201ENST00000321805 USP19O94966 1318 aa30.25■■■□□ 2.43
UBE2D3-201ENST00000321805 NRKQ7Z2Y5 1582 aa30.25■■■□□ 2.43
UBE2D3-201ENST00000321805 BTG4Q9NY30 223 aa30.25■■■□□ 2.43
UBE2D3-201ENST00000321805 CLSPNQ9HAW4 1339 aa30.23■■■□□ 2.43
UBE2D3-201ENST00000321805 KIAA0232Q92628 1395 aa30.23■■■□□ 2.43
UBE2D3-201ENST00000321805 NLRP13Q86W25 1043 aa30.22■■■□□ 2.43
UBE2D3-201ENST00000321805 SSH2Q76I76 1423 aa30.22■■■□□ 2.43
UBE2D3-201ENST00000321805 AKAP12Q02952 1782 aa30.21■■■□□ 2.43
UBE2D3-201ENST00000321805 ZNF692Q9BU19 519 aaPredicted RBP30.21■■■□□ 2.43
UBE2D3-201ENST00000321805 CCDC9Q9Y3X0 531 aaKnown RBP30.21■■■□□ 2.43
UBE2D3-201ENST00000321805 CPDO75976 1380 aa30.2■■■□□ 2.43
UBE2D3-201ENST00000321805 ONECUT3O60422 494 aaPredicted RBP30.2■■■□□ 2.43
UBE2D3-201ENST00000321805 NUTM2GQ5VZR2 741 aa30.2■■■□□ 2.43
UBE2D3-201ENST00000321805 CPSF1Q10570 1443 aaKnown RBP30.17■■■□□ 2.42
UBE2D3-201ENST00000321805 TIMELESSQ9UNS1 1208 aa30.17■■■□□ 2.42
UBE2D3-201ENST00000321805 EP400Q96L91 3159 aa30.17■■■□□ 2.42
UBE2D3-201ENST00000321805 SLC24A1O60721 1099 aa30.15■■■□□ 2.42
UBE2D3-201ENST00000321805 PUS7Q96PZ0 661 aaKnown RBP30.15■■■□□ 2.42
UBE2D3-201ENST00000321805 SLIT3O75094 1523 aa30.15■■■□□ 2.42
UBE2D3-201ENST00000321805 BRWD3Q6RI45 1802 aa30.15■■■□□ 2.42
UBE2D3-201ENST00000321805 PIK3C2AO00443 1686 aa30.14■■■□□ 2.42
UBE2D3-201ENST00000321805 SEPT12Q8IYM1 358 aa30.14■■■□□ 2.42
UBE2D3-201ENST00000321805 SPATA31A5Q5VU36 1347 aa30.14■■■□□ 2.42
UBE2D3-201ENST00000321805 SPATA31A7Q8IWB4 1347 aa30.14■■■□□ 2.42
UBE2D3-201ENST00000321805 ZC3H6P61129 1189 aaKnown RBP30.13■■■□□ 2.41
UBE2D3-201ENST00000321805 TTC21AQ8NDW8 1320 aa30.13■■■□□ 2.41
UBE2D3-201ENST00000321805 LMO7Q8WWI1 1683 aa30.12■■■□□ 2.41
UBE2D3-201ENST00000321805 GCP02774 474 aa30.12■■■□□ 2.41
UBE2D3-201ENST00000321805 CCDC125Q86Z20 511 aa30.12■■■□□ 2.41
UBE2D3-201ENST00000321805 MON2Q7Z3U7 1717 aa30.12■■■□□ 2.41
UBE2D3-201ENST00000321805 NLRP6P59044 892 aa30.11■■■□□ 2.41
UBE2D3-201ENST00000321805 CHRNA2Q15822 529 aa30.1■■■□□ 2.41
UBE2D3-201ENST00000321805 TTC21BQ7Z4L5 1316 aa30.1■■■□□ 2.41
UBE2D3-201ENST00000321805 KTN1Q86UP2 1357 aaKnown RBP30.09■■■□□ 2.41
UBE2D3-201ENST00000321805 THSD7AQ9UPZ6 1657 aa30.07■■■□□ 2.4
UBE2D3-201ENST00000321805 FAM98CQ17RN3 349 aaKnown RBP30.06■■■□□ 2.4
UBE2D3-201ENST00000321805 TESK2Q96S53 571 aa30.06■■■□□ 2.4
UBE2D3-201ENST00000321805 CAMTA1Q9Y6Y1 1673 aa30.06■■■□□ 2.4
UBE2D3-201ENST00000321805 NINLQ9Y2I6 1382 aa30.05■■■□□ 2.4
UBE2D3-201ENST00000321805 SPATA31A1Q5TZJ5 1347 aa30.05■■■□□ 2.4
UBE2D3-201ENST00000321805 KRT27Q7Z3Y8 459 aa30.05■■■□□ 2.4
UBE2D3-201ENST00000321805 PCGF6Q9BYE7 350 aa30.05■■■□□ 2.4
UBE2D3-201ENST00000321805 CD163L1Q9NR16 1453 aa30.05■■■□□ 2.4
UBE2D3-201ENST00000321805 ST20-MTHFSA0A0A6YYL1 179 aa30.04■■■□□ 2.4
UBE2D3-201ENST00000321805 A0A0G2JS52 829 aa30.03■■■□□ 2.4
UBE2D3-201ENST00000321805 MYT1Q01538 1121 aa30.03■■■□□ 2.4
UBE2D3-201ENST00000321805 STRN4Q9NRL3 753 aa30.03■■■□□ 2.4
UBE2D3-201ENST00000321805 BLMP54132 1417 aaPredicted RBP30.03■■■□□ 2.4
UBE2D3-201ENST00000321805 AATKQ6ZMQ8 1374 aa30.03■■■□□ 2.4
UBE2D3-201ENST00000321805 KCNH5Q8NCM2 988 aa30.02■■■□□ 2.4
UBE2D3-201ENST00000321805 USP54Q70EL1 1684 aa30.01■■■□□ 2.4
UBE2D3-201ENST00000321805 EVA1CP58658 441 aa30.01■■■□□ 2.39
UBE2D3-201ENST00000321805 HDGFL2Q7Z4V5 671 aaPredicted RBP30.01■■■□□ 2.39
UBE2D3-201ENST00000321805 USP47Q96K76 1375 aa30.01■■■□□ 2.39
UBE2D3-201ENST00000321805 COL5A2P05997 1499 aaPredicted RBP30■■■□□ 2.39
UBE2D3-201ENST00000321805 TMC1Q8TDI8 760 aa29.99■■■□□ 2.39
UBE2D3-201ENST00000321805 TERF2IPQ9NYB0 399 aa29.99■■■□□ 2.39
UBE2D3-201ENST00000321805 EDC4Q6P2E9 1401 aaKnown RBP29.98■■■□□ 2.39
UBE2D3-201ENST00000321805 USP31Q70CQ4 1352 aa29.98■■■□□ 2.39
UBE2D3-201ENST00000321805 BARGINQ6ZT62 677 aa29.97■■■□□ 2.39
UBE2D3-201ENST00000321805 SLC12A5Q9H2X9 1139 aa29.96■■■□□ 2.39
UBE2D3-201ENST00000321805 ABCC6O95255 1503 aa29.96■■■□□ 2.39
UBE2D3-201ENST00000321805 COL18A1P39060 1754 aa29.95■■■□□ 2.39
UBE2D3-201ENST00000321805 A0A1W2PP64 1363 aa29.95■■■□□ 2.39
UBE2D3-201ENST00000321805 THRAP3Q9Y2W1 955 aaKnown RBP29.95■■■□□ 2.39
UBE2D3-201ENST00000321805 NFAT5O94916 1531 aa29.95■■■□□ 2.38
UBE2D3-201ENST00000321805 LARP1Q6PKG0 1096 aaKnown RBP29.93■■■□□ 2.38
UBE2D3-201ENST00000321805 ARHGEF25Q86VW2 580 aa29.93■■■□□ 2.38
UBE2D3-201ENST00000321805 TMF1P82094 1093 aa29.92■■■□□ 2.38
UBE2D3-201ENST00000321805 CRB1P82279 1406 aa29.92■■■□□ 2.38
UBE2D3-201ENST00000321805 TCP11L2Q8N4U5 519 aa29.92■■■□□ 2.38
UBE2D3-201ENST00000321805 SF3B2Q13435 895 aaKnown RBP29.9■■■□□ 2.38
UBE2D3-201ENST00000321805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.9■■■□□ 2.38
UBE2D3-201ENST00000321805 USP35Q9P2H5 1018 aa29.89■■■□□ 2.38
UBE2D3-201ENST00000321805 ZBTB7CA1YPR0 619 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms