RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 CEP152O94986 1710 aa20.51■□□□□ 0.87
PDE1C-201ENST00000321453 TERF1P54274 439 aa20.51■□□□□ 0.87
PDE1C-201ENST00000321453 SYCE3A1L190 88 aa20.51■□□□□ 0.87
PDE1C-201ENST00000321453 ZNF445P59923 1031 aa20.51■□□□□ 0.87
PDE1C-201ENST00000321453 IQSEC2Q5JU85 1478 aa20.51■□□□□ 0.87
PDE1C-201ENST00000321453 SMAP1Q8IYB5 467 aaPredicted RBP20.5■□□□□ 0.87
PDE1C-201ENST00000321453 LMBRD1Q9NUN5 540 aa20.5■□□□□ 0.87
PDE1C-201ENST00000321453 DNTTIP2Q5QJE6 756 aaKnown RBP20.5■□□□□ 0.87
PDE1C-201ENST00000321453 ZBTB40Q9NUA8 1239 aa20.5■□□□□ 0.87
PDE1C-201ENST00000321453 SHPRHQ149N8 1683 aa20.5■□□□□ 0.87
PDE1C-201ENST00000321453 ERVK-7P63135 1459 aa20.49■□□□□ 0.87
PDE1C-201ENST00000321453 U2SURPO15042 1029 aaKnown RBP20.49■□□□□ 0.87
PDE1C-201ENST00000321453 UNC13BO14795 1591 aa20.49■□□□□ 0.87
PDE1C-201ENST00000321453 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
PDE1C-201ENST00000321453 DYNC1I1O14576 645 aa20.48■□□□□ 0.87
PDE1C-201ENST00000321453 PTMAP06454 111 aaKnown RBP20.48■□□□□ 0.87
PDE1C-201ENST00000321453 GPT2Q8TD30 523 aa20.48■□□□□ 0.87
PDE1C-201ENST00000321453 PDLIM2Q96JY6 352 aa20.48■□□□□ 0.87
PDE1C-201ENST00000321453 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
PDE1C-201ENST00000321453 SASS6Q6UVJ0 657 aa20.47■□□□□ 0.87
PDE1C-201ENST00000321453 ZGPATQ8N5A5 531 aaKnown RBP20.47■□□□□ 0.87
PDE1C-201ENST00000321453 CBX1P83916 185 aa20.46■□□□□ 0.87
PDE1C-201ENST00000321453 TPRNQ4KMQ1 711 aa20.46■□□□□ 0.87
PDE1C-201ENST00000321453 IQGAP3Q86VI3 1631 aa20.46■□□□□ 0.87
PDE1C-201ENST00000321453 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
PDE1C-201ENST00000321453 KIF16BQ96L93 1317 aa20.46■□□□□ 0.87
PDE1C-201ENST00000321453 ABCA8O94911 1581 aa20.46■□□□□ 0.87
PDE1C-201ENST00000321453 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
PDE1C-201ENST00000321453 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
PDE1C-201ENST00000321453 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
PDE1C-201ENST00000321453 TMEM63CQ9P1W3 806 aa20.44■□□□□ 0.86
PDE1C-201ENST00000321453 HS1BP3Q53T59 392 aa20.44■□□□□ 0.86
PDE1C-201ENST00000321453 ZNF830Q96NB3 372 aaPredicted RBP20.44■□□□□ 0.86
PDE1C-201ENST00000321453 CSPP1Q1MSJ5 1256 aa20.43■□□□□ 0.86
PDE1C-201ENST00000321453 FOXD4L6Q3SYB3 417 aaPredicted RBP20.43■□□□□ 0.86
PDE1C-201ENST00000321453 FOXD4L3Q6VB84 417 aaPredicted RBP20.43■□□□□ 0.86
PDE1C-201ENST00000321453 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
PDE1C-201ENST00000321453 ADGRF5Q8IZF2 1346 aa20.42■□□□□ 0.86
PDE1C-201ENST00000321453 ARHGAP5Q13017 1502 aa20.42■□□□□ 0.86
PDE1C-201ENST00000321453 CCDC27Q2M243 656 aa20.42■□□□□ 0.86
PDE1C-201ENST00000321453 C17orf53Q8N3J3 647 aaPredicted RBP20.42■□□□□ 0.86
PDE1C-201ENST00000321453 TRAK1Q9UPV9 953 aa20.42■□□□□ 0.86
PDE1C-201ENST00000321453 SHROOM2Q13796 1616 aa20.41■□□□□ 0.86
PDE1C-201ENST00000321453 RSPH4AQ5TD94 716 aa20.41■□□□□ 0.86
PDE1C-201ENST00000321453 CCDC94Q9BW85 323 aaPredicted RBP20.41■□□□□ 0.86
PDE1C-201ENST00000321453 CCDC39Q9UFE4 941 aa20.41■□□□□ 0.86
PDE1C-201ENST00000321453 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
PDE1C-201ENST00000321453 CLEC17AQ6ZS10 378 aa20.4■□□□□ 0.86
PDE1C-201ENST00000321453 NUCB2P80303 420 aa20.39■□□□□ 0.85
PDE1C-201ENST00000321453 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
PDE1C-201ENST00000321453 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.39■□□□□ 0.85
PDE1C-201ENST00000321453 ZSCAN20P17040 1043 aaPredicted RBP20.39■□□□□ 0.85
PDE1C-201ENST00000321453 DMTNQ08495 405 aa20.39■□□□□ 0.85
PDE1C-201ENST00000321453 MTERF4Q7Z6M4 381 aaKnown RBP20.39■□□□□ 0.85
PDE1C-201ENST00000321453 ATP10AO60312 1499 aa20.38■□□□□ 0.85
PDE1C-201ENST00000321453 TTC37Q6PGP7 1564 aa20.38■□□□□ 0.85
PDE1C-201ENST00000321453 IGSF3O75054 1194 aa20.38■□□□□ 0.85
PDE1C-201ENST00000321453 LRSAM1Q6UWE0 723 aa20.38■□□□□ 0.85
PDE1C-201ENST00000321453 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
PDE1C-201ENST00000321453 CDC45O75419 566 aa20.37■□□□□ 0.85
PDE1C-201ENST00000321453 TMPOP42166 694 aaKnown RBP20.37■□□□□ 0.85
PDE1C-201ENST00000321453 GSPT1P15170 499 aaKnown RBP20.37■□□□□ 0.85
PDE1C-201ENST00000321453 KANK1Q14678 1352 aa20.37■□□□□ 0.85
PDE1C-201ENST00000321453 APBB1O00213 710 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
PDE1C-201ENST00000321453 ZDHHC9Q9Y397 364 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 PPIP5K1Q6PFW1 1433 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 ZNF518AQ6AHZ1 1483 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 CFAP74Q9C0B2 1584 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 SPDYE4A6NLX3 237 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 KIAA2012Q0VF49 1180 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 SPHKAPQ2M3C7 1700 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 ZNF710Q8N1W2 664 aa20.36■□□□□ 0.85
PDE1C-201ENST00000321453 CYP2E1P05181 493 aaPredicted RBP20.35■□□□□ 0.85
PDE1C-201ENST00000321453 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
PDE1C-201ENST00000321453 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
PDE1C-201ENST00000321453 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
PDE1C-201ENST00000321453 NOL8Q76FK4 1167 aaKnown RBP20.35■□□□□ 0.85
PDE1C-201ENST00000321453 RABEP1Q15276 862 aa20.34■□□□□ 0.85
PDE1C-201ENST00000321453 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
PDE1C-201ENST00000321453 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
PDE1C-201ENST00000321453 CD109Q6YHK3 1445 aa20.34■□□□□ 0.85
PDE1C-201ENST00000321453 PTPRTO14522 1441 aa20.34■□□□□ 0.85
PDE1C-201ENST00000321453 ATP2B3Q16720 1220 aa20.33■□□□□ 0.85
PDE1C-201ENST00000321453 PPP4R3BQ5MIZ7 849 aa20.33■□□□□ 0.85
PDE1C-201ENST00000321453 SIRT2Q8IXJ6 389 aa20.33■□□□□ 0.84
PDE1C-201ENST00000321453 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.84
PDE1C-201ENST00000321453 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
PDE1C-201ENST00000321453 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
PDE1C-201ENST00000321453 TMEM132EQ6IEE7 984 aa20.32■□□□□ 0.84
PDE1C-201ENST00000321453 FGD1P98174 961 aa20.32■□□□□ 0.84
PDE1C-201ENST00000321453 MYRIPQ8NFW9 859 aa20.32■□□□□ 0.84
PDE1C-201ENST00000321453 TTC12Q9H892 705 aaPredicted RBP20.32■□□□□ 0.84
PDE1C-201ENST00000321453 NOS1P29475 1434 aa20.31■□□□□ 0.84
PDE1C-201ENST00000321453 CT47B1P0C2W7 299 aaPredicted RBP20.31■□□□□ 0.84
PDE1C-201ENST00000321453 GDPD2Q9HCC8 539 aa20.31■□□□□ 0.84
PDE1C-201ENST00000321453 MCM5P33992 734 aa20.31■□□□□ 0.84
PDE1C-201ENST00000321453 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
PDE1C-201ENST00000321453 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
PDE1C-201ENST00000321453 ZBTB7BO15156 539 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms