RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 PCDH10Q9P2E7 1040 aa4.8□□□□□ -1.64
SCAMP1-201ENST00000320280 CHIC2Q9UKJ5 165 aa4.8□□□□□ -1.64
SCAMP1-201ENST00000320280 GPR153Q6NV75 609 aa4.79□□□□□ -1.64
SCAMP1-201ENST00000320280 LHX6Q9UPM6 363 aa4.79□□□□□ -1.64
SCAMP1-201ENST00000320280 NCOA3Q9Y6Q9 1424 aa4.79□□□□□ -1.64
SCAMP1-201ENST00000320280 NRXN3Q9Y4C0 1643 aa4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 XRN1Q8IZH2 1706 aaKnown RBP4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 PLPP6Q8IY26 295 aa4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 ARID4BQ4LE39 1312 aaPredicted RBP4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 CPS1P31327 1500 aa4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 CHD2O14647 1828 aaKnown RBP4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 RALGAPBQ86X10 1494 aa4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 SCAF11Q99590 1463 aaKnown RBP4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 PLEKHG1Q9ULL1 1385 aa4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 NKX1-1Q15270 411 aaPredicted RBP4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 NKTRP30414 1462 aaKnown RBP4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 SLC24A1O60721 1099 aa4.78□□□□□ -1.64
SCAMP1-201ENST00000320280 ADGRB2O60241 1585 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 DSG2Q14126 1118 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 STRCQ7RTU9 1775 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 TMEM2Q9UHN6 1383 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 ZNF316A6NFI3 1004 aaPredicted RBP4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 TECPR2O15040 1411 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 PIK3C2GO75747 1445 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 PSEN2P49810 448 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 GGT6Q6P531 493 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 TRIM52Q96A61 297 aa4.77□□□□□ -1.65
SCAMP1-201ENST00000320280 GPRASP1Q5JY77 1395 aa4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 THEMISQ8N1K5 641 aaPredicted RBP4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 RNF166Q96A37 237 aaPredicted RBP4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 CFAP65Q6ZU64 1925 aaKnown RBP4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 PPARGC1BQ86YN6 1023 aaKnown RBP4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 PCDHGA4Q9Y5G9 962 aa4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 RIMS2Q9UQ26 1411 aa4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 ITGAEP38570 1179 aa4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 LARP6Q9BRS8 491 aaKnown RBP4.76□□□□□ -1.65
SCAMP1-201ENST00000320280 PTCH1Q13635 1447 aa4.75□□□□□ -1.65
SCAMP1-201ENST00000320280 ARHGEF28Q8N1W1 1705 aaKnown RBP4.75□□□□□ -1.65
SCAMP1-201ENST00000320280 SIRT1Q96EB6 747 aa4.75□□□□□ -1.65
SCAMP1-201ENST00000320280 ALKQ9UM73 1620 aa4.75□□□□□ -1.65
SCAMP1-201ENST00000320280 ITSN1Q15811 1721 aa4.75□□□□□ -1.65
SCAMP1-201ENST00000320280 HS6ST3Q8IZP7 471 aa4.75□□□□□ -1.65
SCAMP1-201ENST00000320280 SBNO2Q9Y2G9 1366 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 FAM135BQ49AJ0 1406 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 ADGRB1O14514 1584 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 KDM4FA0A1W2PPD8 638 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 PTPN5P54829 565 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 DCCP43146 1447 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 TONSLQ96HA7 1378 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 KCNK17Q96T54 332 aa4.74□□□□□ -1.65
SCAMP1-201ENST00000320280 NPHP4O75161 1426 aaPredicted RBP4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 EIF3AQ14152 1382 aaKnown RBP4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 ZNF454Q8N9F8 522 aa4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 CFAP44Q96MT7 982 aa4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 PCGF6Q9BYE7 350 aa4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 CDC42BPGQ6DT37 1551 aa4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 KCTD12Q96CX2 325 aaKnown RBP4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 EID1Q9Y6B2 187 aa4.73□□□□□ -1.65
SCAMP1-201ENST00000320280 KIF1AQ12756 1690 aa4.72□□□□□ -1.65
SCAMP1-201ENST00000320280 ZNF687Q8N1G0 1237 aa4.72□□□□□ -1.65
SCAMP1-201ENST00000320280 PUS7Q96PZ0 661 aaKnown RBP4.72□□□□□ -1.65
SCAMP1-201ENST00000320280 QRICH2Q9H0J4 1663 aa4.72□□□□□ -1.65
SCAMP1-201ENST00000320280 USP54Q70EL1 1684 aa4.72□□□□□ -1.65
SCAMP1-201ENST00000320280 LSM11P83369 360 aaKnown RBP eCLIP4.71□□□□□ -1.65
SCAMP1-201ENST00000320280 ASXL1Q8IXJ9 1541 aa4.71□□□□□ -1.65
SCAMP1-201ENST00000320280 TOPAZ1Q8N9V7 1692 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 IDI1Q13907 227 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 ANKLE2Q86XL3 938 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 TBX22Q9Y458 520 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 ADAMTS13Q76LX8 1427 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 LRPPRCP42704 1394 aaKnown RBP4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 FMN2Q9NZ56 1722 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 LRRC7Q96NW7 1537 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 ABCC11Q96J66 1382 aa4.71□□□□□ -1.66
SCAMP1-201ENST00000320280 PPP1R15BQ5SWA1 713 aa4.7□□□□□ -1.66
SCAMP1-201ENST00000320280 USP32Q8NFA0 1604 aa4.7□□□□□ -1.66
SCAMP1-201ENST00000320280 BRD4O60885 1362 aaPredicted RBP4.7□□□□□ -1.66
SCAMP1-201ENST00000320280 NINLQ9Y2I6 1382 aa4.7□□□□□ -1.66
SCAMP1-201ENST00000320280 POTEEQ6S8J3 1075 aa4.7□□□□□ -1.66
SCAMP1-201ENST00000320280 GPHNQ9NQX3 736 aaPredicted RBP4.7□□□□□ -1.66
SCAMP1-201ENST00000320280 XIRP1Q702N8 1843 aaKnown RBP4.7□□□□□ -1.66
SCAMP1-201ENST00000320280 C14orf93Q9H972 538 aaKnown RBP4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 RTN4Q9NQC3 1192 aaKnown RBP4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 ANKARQ7Z5J8 1434 aa4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 KIF3CO14782 793 aa4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 MAP3K9P80192 1104 aa4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 MLECQ14165 292 aa4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 DMRTA1Q5VZB9 504 aa4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 CCER1Q8TC90 406 aaPredicted RBP4.69□□□□□ -1.66
SCAMP1-201ENST00000320280 ZSWIM6Q9HCJ5 1215 aa4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 YTHDC2Q9H6S0 1430 aaKnown RBP4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 NALCNQ8IZF0 1738 aa4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 LTBP4Q8N2S1 1624 aa4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 STRCP1A6NGW2 1772 aa4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 AKAP12Q02952 1782 aa4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 FBXO31Q5XUX0 539 aaPredicted RBP4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 RBM33Q96EV2 1170 aaKnown RBP4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 PPP1R15AO75807 674 aaPredicted RBP4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 FOXK1P85037 733 aa4.68□□□□□ -1.66
SCAMP1-201ENST00000320280 GOLGA8CPA6NN73 597 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms