RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 PIK3C2AO00443 1686 aa18.57■□□□□ 0.56
PRPF18-201ENST00000320054 TTC21BQ7Z4L5 1316 aa18.57■□□□□ 0.56
PRPF18-201ENST00000320054 ALS2Q96Q42 1657 aa18.57■□□□□ 0.56
PRPF18-201ENST00000320054 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
PRPF18-201ENST00000320054 FOXO3O43524 673 aa18.56■□□□□ 0.56
PRPF18-201ENST00000320054 TOM1O60784 492 aa18.56■□□□□ 0.56
PRPF18-201ENST00000320054 PSME1Q06323 249 aa18.56■□□□□ 0.56
PRPF18-201ENST00000320054 PXDNQ92626 1479 aa18.56■□□□□ 0.56
PRPF18-201ENST00000320054 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
PRPF18-201ENST00000320054 MARF1Q9Y4F3 1742 aaKnown RBP18.55■□□□□ 0.56
PRPF18-201ENST00000320054 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
PRPF18-201ENST00000320054 AHDC1Q5TGY3 1603 aaPredicted RBP18.55■□□□□ 0.56
PRPF18-201ENST00000320054 FYB1O15117 783 aa18.54■□□□□ 0.56
PRPF18-201ENST00000320054 RALBP1Q15311 655 aa18.53■□□□□ 0.56
PRPF18-201ENST00000320054 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
PRPF18-201ENST00000320054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.53■□□□□ 0.56
PRPF18-201ENST00000320054 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
PRPF18-201ENST00000320054 SBNO1A3KN83 1393 aa18.52■□□□□ 0.55
PRPF18-201ENST00000320054 USP31Q70CQ4 1352 aa18.52■□□□□ 0.55
PRPF18-201ENST00000320054 OVOS2A0A0J9YW53 1432 aa18.5■□□□□ 0.55
PRPF18-201ENST00000320054 OVOS2Q6IE36 1432 aa18.5■□□□□ 0.55
PRPF18-201ENST00000320054 UBAP1LF5GYI3 381 aa18.5■□□□□ 0.55
PRPF18-201ENST00000320054 NME9Q86XW9 330 aa18.5■□□□□ 0.55
PRPF18-201ENST00000320054 MAP2P11137 1827 aaKnown RBP18.5■□□□□ 0.55
PRPF18-201ENST00000320054 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
PRPF18-201ENST00000320054 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
PRPF18-201ENST00000320054 MIER1Q8N108 512 aa18.49■□□□□ 0.55
PRPF18-201ENST00000320054 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
PRPF18-201ENST00000320054 MORC1Q86VD1 984 aa18.48■□□□□ 0.55
PRPF18-201ENST00000320054 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
PRPF18-201ENST00000320054 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
PRPF18-201ENST00000320054 CRYBG1Q9Y4K1 1723 aa18.47■□□□□ 0.55
PRPF18-201ENST00000320054 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
PRPF18-201ENST00000320054 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
PRPF18-201ENST00000320054 DDX17Q92841 729 aaKnown RBP18.47■□□□□ 0.55
PRPF18-201ENST00000320054 COG3Q96JB2 828 aa18.47■□□□□ 0.55
PRPF18-201ENST00000320054 MYBBP1AQ9BQG0 1328 aaKnown RBP18.47■□□□□ 0.55
PRPF18-201ENST00000320054 CNGB1Q14028 1251 aaPredicted RBP18.46■□□□□ 0.55
PRPF18-201ENST00000320054 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
PRPF18-201ENST00000320054 MED1Q15648 1581 aaPredicted RBP18.45■□□□□ 0.54
PRPF18-201ENST00000320054 SPATA31A3Q5VYP0 1347 aa18.45■□□□□ 0.54
PRPF18-201ENST00000320054 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
PRPF18-201ENST00000320054 ARHGEF10O15013 1369 aa18.44■□□□□ 0.54
PRPF18-201ENST00000320054 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
PRPF18-201ENST00000320054 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
PRPF18-201ENST00000320054 SLIT3O75094 1523 aa18.44■□□□□ 0.54
PRPF18-201ENST00000320054 CCER2I3L3R5 266 aa18.43■□□□□ 0.54
PRPF18-201ENST00000320054 NLRP6P59044 892 aa18.43■□□□□ 0.54
PRPF18-201ENST00000320054 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
PRPF18-201ENST00000320054 AATKQ6ZMQ8 1374 aa18.42■□□□□ 0.54
PRPF18-201ENST00000320054 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
PRPF18-201ENST00000320054 ABCA3Q99758 1704 aa18.42■□□□□ 0.54
PRPF18-201ENST00000320054 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
PRPF18-201ENST00000320054 LTN1O94822 1766 aa18.41■□□□□ 0.54
PRPF18-201ENST00000320054 PIP4K2BP78356 416 aa18.41■□□□□ 0.54
PRPF18-201ENST00000320054 USP19O94966 1318 aa18.41■□□□□ 0.54
PRPF18-201ENST00000320054 NFAT5O94916 1531 aa18.39■□□□□ 0.54
PRPF18-201ENST00000320054 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.53
PRPF18-201ENST00000320054 SMG6Q86US8 1419 aaKnown RBP18.39■□□□□ 0.53
PRPF18-201ENST00000320054 NUTM2GQ5VZR2 741 aa18.38■□□□□ 0.53
PRPF18-201ENST00000320054 LMOD2Q6P5Q4 547 aa18.38■□□□□ 0.53
PRPF18-201ENST00000320054 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
PRPF18-201ENST00000320054 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
PRPF18-201ENST00000320054 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
PRPF18-201ENST00000320054 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
PRPF18-201ENST00000320054 CDK12Q9NYV4 1490 aaPredicted RBP18.34■□□□□ 0.53
PRPF18-201ENST00000320054 KIF24Q5T7B8 1368 aa18.34■□□□□ 0.53
PRPF18-201ENST00000320054 POLKQ9UBT6 870 aa18.34■□□□□ 0.53
PRPF18-201ENST00000320054 GCP02774 474 aa18.33■□□□□ 0.52
PRPF18-201ENST00000320054 MTHFSP49914 203 aa18.33■□□□□ 0.52
PRPF18-201ENST00000320054 INSRP06213 1382 aa18.32■□□□□ 0.52
PRPF18-201ENST00000320054 PNPLA6Q8IY17 1366 aa18.32■□□□□ 0.52
PRPF18-201ENST00000320054 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
PRPF18-201ENST00000320054 MRS2Q9HD23 443 aa18.31■□□□□ 0.52
PRPF18-201ENST00000320054 ABCC6O95255 1503 aa18.31■□□□□ 0.52
PRPF18-201ENST00000320054 COL3A1P02461 1466 aaPredicted RBP18.31■□□□□ 0.52
PRPF18-201ENST00000320054 COL18A1P39060 1754 aa18.3■□□□□ 0.52
PRPF18-201ENST00000320054 FBLN1P23142 703 aa18.3■□□□□ 0.52
PRPF18-201ENST00000320054 CFAP53Q96M91 514 aa18.3■□□□□ 0.52
PRPF18-201ENST00000320054 RGPD5Q99666 1765 aa18.3■□□□□ 0.52
PRPF18-201ENST00000320054 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
PRPF18-201ENST00000320054 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
PRPF18-201ENST00000320054 SOX12O15370 315 aa18.29■□□□□ 0.52
PRPF18-201ENST00000320054 RRS1Q15050 365 aaKnown RBP18.29■□□□□ 0.52
PRPF18-201ENST00000320054 EMILIN1Q9Y6C2 1016 aa18.29■□□□□ 0.52
PRPF18-201ENST00000320054 CPDO75976 1380 aa18.29■□□□□ 0.52
PRPF18-201ENST00000320054 FLT4P35916 1363 aa18.28■□□□□ 0.52
PRPF18-201ENST00000320054 ARHGEF25Q86VW2 580 aa18.27■□□□□ 0.52
PRPF18-201ENST00000320054 CABLES1Q8TDN4 633 aa18.27■□□□□ 0.52
PRPF18-201ENST00000320054 JCADQ9P266 1359 aa18.26■□□□□ 0.51
PRPF18-201ENST00000320054 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
PRPF18-201ENST00000320054 LMO7Q8WWI1 1683 aa18.25■□□□□ 0.51
PRPF18-201ENST00000320054 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
PRPF18-201ENST00000320054 AMPHP49418 695 aa18.24■□□□□ 0.51
PRPF18-201ENST00000320054 IP6K1Q92551 441 aa18.24■□□□□ 0.51
PRPF18-201ENST00000320054 FAM208AQ9UK61 1670 aaKnown RBP18.24■□□□□ 0.51
PRPF18-201ENST00000320054 COL14A1Q05707 1796 aaKnown RBP18.24■□□□□ 0.51
PRPF18-201ENST00000320054 BLMP54132 1417 aaPredicted RBP18.23■□□□□ 0.51
PRPF18-201ENST00000320054 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
PRPF18-201ENST00000320054 PLEKHG5O94827 1062 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms