RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 RILPL2Q969X0 211 aa9.26□□□□□ -0.93
CDHR3-201ENST00000317716 PDE3AQ14432 1141 aa9.26□□□□□ -0.93
CDHR3-201ENST00000317716 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
CDHR3-201ENST00000317716 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
CDHR3-201ENST00000317716 TBC1D32Q96NH3 1257 aa9.25□□□□□ -0.93
CDHR3-201ENST00000317716 TNRQ92752 1358 aa9.25□□□□□ -0.93
CDHR3-201ENST00000317716 UGGT1Q9NYU2 1555 aa9.25□□□□□ -0.93
CDHR3-201ENST00000317716 A0A0G2JS52 829 aa9.25□□□□□ -0.93
CDHR3-201ENST00000317716 DDX19BQ9UMR2 479 aa9.25□□□□□ -0.93
CDHR3-201ENST00000317716 SYCE3A1L190 88 aa9.25□□□□□ -0.93
CDHR3-201ENST00000317716 NPHP1O15259 732 aa9.25□□□□□ -0.93
CDHR3-201ENST00000317716 PIP4K2BP78356 416 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 PDCL3Q9H2J4 239 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 FAM135AQ9P2D6 1515 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 WWC1Q8IX03 1113 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 RUNDC1Q96C34 613 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 RIPK4P57078 832 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 OS9Q13438 667 aaPredicted RBP9.24□□□□□ -0.93
CDHR3-201ENST00000317716 NOB1Q9ULX3 412 aaKnown RBP9.24□□□□□ -0.93
CDHR3-201ENST00000317716 HECW2Q9P2P5 1572 aa9.24□□□□□ -0.93
CDHR3-201ENST00000317716 RTEL1-TNFRSF6BF6WH68 1400 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 RLBP1P12271 317 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-201ENST00000317716 SYAP1Q96A49 352 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-201ENST00000317716 DMRT2Q9Y5R5 561 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 PLEKHH1Q9ULM0 1364 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 SPDYE4A6NLX3 237 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 CCDC27Q2M243 656 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 ZNF830Q96NB3 372 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-201ENST00000317716 PRAM1Q96QH2 718 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 SLC12A5Q9H2X9 1139 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 GGNBP2Q9H3C7 697 aa9.23□□□□□ -0.93
CDHR3-201ENST00000317716 HMOX1P09601 288 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 MCCP23508 829 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 LTKP29376 864 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 MLH3Q9UHC1 1453 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 KDM4FA0A1W2PPD8 638 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 HAP1P54257 671 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-201ENST00000317716 TSC1Q92574 1164 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 GDPD2Q9HCC8 539 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 PZPP20742 1482 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 K7ELQ4 463 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-201ENST00000317716 RARSP54136 660 aaKnown RBP9.22□□□□□ -0.93
CDHR3-201ENST00000317716 ZRSR1Q15695 479 aaKnown RBP9.22□□□□□ -0.93
CDHR3-201ENST00000317716 NECTIN2Q92692 538 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 ANO2Q9NQ90 1003 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 NOS1P29475 1434 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 NPATQ14207 1427 aa9.22□□□□□ -0.93
CDHR3-201ENST00000317716 FGD1P98174 961 aa9.21□□□□□ -0.93
CDHR3-201ENST00000317716 MVPQ14764 893 aaKnown RBP9.21□□□□□ -0.93
CDHR3-201ENST00000317716 TMEM57Q8N5G2 664 aa9.21□□□□□ -0.94
CDHR3-201ENST00000317716 NEK4P51957 841 aa9.21□□□□□ -0.94
CDHR3-201ENST00000317716 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.94
CDHR3-201ENST00000317716 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
CDHR3-201ENST00000317716 RPRD2Q5VT52 1461 aaKnown RBP9.21□□□□□ -0.94
CDHR3-201ENST00000317716 KDM2BQ8NHM5 1336 aa9.21□□□□□ -0.94
CDHR3-201ENST00000317716 DISP3Q9P2K9 1392 aa9.2□□□□□ -0.94
CDHR3-201ENST00000317716 TNNT3P45378 269 aaPredicted RBP9.2□□□□□ -0.94
CDHR3-201ENST00000317716 SHANK2Q9UPX8 1470 aa9.2□□□□□ -0.94
CDHR3-201ENST00000317716 NUCB2P80303 420 aa9.2□□□□□ -0.94
CDHR3-201ENST00000317716 ARHGEF5Q12774 1597 aa9.2□□□□□ -0.94
CDHR3-201ENST00000317716 LRPPRCP42704 1394 aaKnown RBP9.2□□□□□ -0.94
CDHR3-201ENST00000317716 CFAP74Q9C0B2 1584 aa9.2□□□□□ -0.94
CDHR3-201ENST00000317716 MAP3K4Q9Y6R4 1608 aa9.2□□□□□ -0.94
CDHR3-201ENST00000317716 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 THUMPD2Q9BTF0 503 aaKnown RBP9.19□□□□□ -0.94
CDHR3-201ENST00000317716 CCDC39Q9UFE4 941 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 EIF3AQ14152 1382 aaKnown RBP9.19□□□□□ -0.94
CDHR3-201ENST00000317716 GAS2L3Q86XJ1 694 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 CHMP4BQ9H444 224 aaKnown RBP9.19□□□□□ -0.94
CDHR3-201ENST00000317716 IFT57Q9NWB7 429 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 ABCA6Q8N139 1617 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 FIBPO43427 364 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 MAP7D2Q96T17 732 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 AMOTL2Q9Y2J4 779 aa9.19□□□□□ -0.94
CDHR3-201ENST00000317716 NGDNQ8NEJ9 315 aaKnown RBP9.18□□□□□ -0.94
CDHR3-201ENST00000317716 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
CDHR3-201ENST00000317716 CHAMP1Q96JM3 812 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 VPS37CA5D8V6 355 aaPredicted RBP9.18□□□□□ -0.94
CDHR3-201ENST00000317716 ADGRL2O95490 1459 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 ARAP3Q8WWN8 1544 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 SSH1Q8WYL5 1049 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
CDHR3-201ENST00000317716 DTNBO60941 627 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 CDC45O75419 566 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 FOSBP53539 338 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 CHD1LQ86WJ1 897 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDHR3-201ENST00000317716 ZNF428Q96B54 188 aa9.18□□□□□ -0.94
CDHR3-201ENST00000317716 PPP6R1Q9UPN7 881 aa9.17□□□□□ -0.94
CDHR3-201ENST00000317716 GLI2P10070 1586 aa9.17□□□□□ -0.94
CDHR3-201ENST00000317716 DIP2CQ9Y2E4 1556 aa9.17□□□□□ -0.94
CDHR3-201ENST00000317716 BAG4O95429 457 aaKnown RBP9.17□□□□□ -0.94
CDHR3-201ENST00000317716 ATF7IPQ6VMQ6 1270 aa9.17□□□□□ -0.94
CDHR3-201ENST00000317716 ERICH4A6NGS2 130 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms