RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 ABCA1O95477 2261 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 SLFNL1Q499Z3 407 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 LTV1Q96GA3 475 aaPredicted RBP4.57□□□□□ -1.68
GEN1-201ENST00000317402 TESK2Q96S53 571 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 PRDM10Q9NQV6 1147 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 KIAA1217Q5T5P2 1943 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 NUP214P35658 2090 aaPredicted RBP4.57□□□□□ -1.68
GEN1-201ENST00000317402 PLXNC1O60486 1568 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.57□□□□□ -1.68
GEN1-201ENST00000317402 EIF4G3O43432 1585 aaKnown RBP4.57□□□□□ -1.68
GEN1-201ENST00000317402 PIP4K2AP48426 406 aaPredicted RBP4.57□□□□□ -1.68
GEN1-201ENST00000317402 CCDC9Q9Y3X0 531 aaKnown RBP4.57□□□□□ -1.68
GEN1-201ENST00000317402 MAST1Q9Y2H9 1570 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 PTPN21Q16825 1174 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 A0A087WWV3 80 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 BRD2P25440 801 aaKnown RBP4.57□□□□□ -1.68
GEN1-201ENST00000317402 DAPK1P53355 1430 aa4.57□□□□□ -1.68
GEN1-201ENST00000317402 USP34Q70CQ2 3546 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 FOXO3O43524 673 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 BBXQ8WY36 941 aaPredicted RBP4.56□□□□□ -1.68
GEN1-201ENST00000317402 CACNA1GO43497 2377 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 CHD3Q12873 2000 aaKnown RBP4.56□□□□□ -1.68
GEN1-201ENST00000317402 KDM5DQ9BY66 1539 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 USHBP1Q8N6Y0 703 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 SPATA31E1Q6ZUB1 1445 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 CACNA1BQ00975 2339 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 RRS1Q15050 365 aaKnown RBP4.56□□□□□ -1.68
GEN1-201ENST00000317402 PMFBP1Q8TBY8 1022 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 PIKFYVEQ9Y2I7 2098 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 KIF26BQ2KJY2 2108 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 ADGRL2O95490 1459 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 ZNF830Q96NB3 372 aaPredicted RBP4.56□□□□□ -1.68
GEN1-201ENST00000317402 PDZRN3Q9UPQ7 1066 aa4.56□□□□□ -1.68
GEN1-201ENST00000317402 PTMAP06454 111 aaKnown RBP4.55□□□□□ -1.68
GEN1-201ENST00000317402 IL25Q9H293 177 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 UNC13CQ8NB66 2214 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 SPTA1P02549 2419 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 GRIN2AQ12879 1464 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 KIAA1210Q9ULL0 1709 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 ZBED9Q6R2W3 1325 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 INSRP06213 1382 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 WWC1Q8IX03 1113 aa4.55□□□□□ -1.68
GEN1-201ENST00000317402 EPRSP07814 1512 aaKnown RBP4.55□□□□□ -1.68
GEN1-201ENST00000317402 DHX37Q8IY37 1157 aaKnown RBP4.54□□□□□ -1.68
GEN1-201ENST00000317402 CACNA1EQ15878 2313 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 HSP90B1P14625 803 aaKnown RBP4.54□□□□□ -1.68
GEN1-201ENST00000317402 CPA1P15085 419 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 MYO7BQ6PIF6 2116 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 CCDC141Q6ZP82 1450 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 ANXA1P04083 346 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 TXNDC2Q86VQ3 553 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 DOCK11Q5JSL3 2073 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 PLA2R1Q13018 1463 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 TRAPPC8Q9Y2L5 1435 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 MSNP26038 577 aaKnown RBP4.54□□□□□ -1.68
GEN1-201ENST00000317402 NUP160Q12769 1436 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 TRIOBPQ9H2D6 2365 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 GDPD2Q9HCC8 539 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 NAP1L2Q9ULW6 460 aaPredicted RBP4.54□□□□□ -1.68
GEN1-201ENST00000317402 PREX2Q70Z35 1606 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 TRHP20396 242 aaPredicted RBP4.54□□□□□ -1.68
GEN1-201ENST00000317402 CFAP44Q96MT7 982 aa4.54□□□□□ -1.68
GEN1-201ENST00000317402 NUP153P49790 1475 aaKnown RBP4.54□□□□□ -1.68
GEN1-201ENST00000317402 TP53BP1Q12888 1972 aaPredicted RBP4.54□□□□□ -1.68
GEN1-201ENST00000317402 EXOSC9Q06265 439 aaKnown RBP4.53□□□□□ -1.68
GEN1-201ENST00000317402 PI4KAP42356 2102 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 CDK5RAP2Q96SN8 1893 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 SLC26A8Q96RN1 970 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 LNPKQ9C0E8 428 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 CHMP4CQ96CF2 233 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 ABCC2Q92887 1545 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 UHRF1BP1LA0JNW5 1464 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 RRP9O43818 475 aaKnown RBP4.53□□□□□ -1.68
GEN1-201ENST00000317402 SMIM5Q71RC9 77 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 ZNF771Q7L3S4 317 aaPredicted RBP4.53□□□□□ -1.68
GEN1-201ENST00000317402 CHMP4BQ9H444 224 aaKnown RBP4.53□□□□□ -1.68
GEN1-201ENST00000317402 NDUFB9Q9Y6M9 179 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 TROQ12816 1431 aaPredicted RBP4.53□□□□□ -1.68
GEN1-201ENST00000317402 DISP1Q96F81 1524 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 CEP290O15078 2479 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 KDM2BQ8NHM5 1336 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 LMOD2Q6P5Q4 547 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 CDC42BPAQ5VT25 1732 aa4.53□□□□□ -1.68
GEN1-201ENST00000317402 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.52□□□□□ -1.69
GEN1-201ENST00000317402 SRPK2P78362 688 aaKnown RBP4.52□□□□□ -1.69
GEN1-201ENST00000317402 STAG3Q9UJ98 1225 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 FOSBP53539 338 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 PHACTR3Q96KR7 559 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 AKAP12Q02952 1782 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 ATP10BO94823 1461 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 DOCK7Q96N67 2140 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 HMGB3O15347 200 aaKnown RBP4.52□□□□□ -1.69
GEN1-201ENST00000317402 SLC51AQ86UW1 340 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 AEBP1Q8IUX7 1158 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 SYTL4Q96C24 671 aaPredicted RBP4.52□□□□□ -1.69
GEN1-201ENST00000317402 PRAMEF22A3QJZ6 481 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 F6X3S4 739 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 FGD1P98174 961 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 OTOFQ9HC10 1997 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 EMILIN1Q9Y6C2 1016 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms