RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.964e-44■□□□□ 10.6
CALR-201ENST00000316448 SSH2Q76I76 1423 aa21.02■□□□□ 0.96
CALR-201ENST00000316448 USP6P35125 1406 aa21.01■□□□□ 0.95
CALR-201ENST00000316448 STRCP1A6NGW2 1772 aa21.01■□□□□ 0.95
CALR-201ENST00000316448 STRCQ7RTU9 1775 aa21.01■□□□□ 0.95
CALR-201ENST00000316448 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
CALR-201ENST00000316448 NRKQ7Z2Y5 1582 aa20.99■□□□□ 0.95
CALR-201ENST00000316448 SMG6Q86US8 1419 aaKnown RBP20.99■□□□□ 0.95
CALR-201ENST00000316448 NGDNQ8NEJ9 315 aaKnown RBP20.99■□□□□ 0.95
CALR-201ENST00000316448 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
CALR-201ENST00000316448 C14orf37Q86TY3 774 aa20.97■□□□□ 0.95
CALR-201ENST00000316448 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
CALR-201ENST00000316448 POLKQ9UBT6 870 aa20.97■□□□□ 0.95
CALR-201ENST00000316448 NEFLP07196 543 aa20.96■□□□□ 0.95
CALR-201ENST00000316448 FKBP8Q14318 412 aa20.96■□□□□ 0.95
CALR-201ENST00000316448 COG3Q96JB2 828 aa20.95■□□□□ 0.94
CALR-201ENST00000316448 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
CALR-201ENST00000316448 PHF8Q9UPP1 1060 aa20.94■□□□□ 0.94
CALR-201ENST00000316448 TMEM94Q12767 1356 aa20.94■□□□□ 0.94
CALR-201ENST00000316448 CFAP53Q96M91 514 aa20.94■□□□□ 0.94
CALR-201ENST00000316448 EMILIN1Q9Y6C2 1016 aa20.93■□□□□ 0.94
CALR-201ENST00000316448 PNPLA6Q8IY17 1366 aa20.92■□□□□ 0.94
CALR-201ENST00000316448 ORAI2Q96SN7 254 aa20.92■□□□□ 0.94
CALR-201ENST00000316448 OVOS2A0A0J9YW53 1432 aa20.91■□□□□ 0.94
CALR-201ENST00000316448 OVOS2Q6IE36 1432 aa20.91■□□□□ 0.94
CALR-201ENST00000316448 ESCO1Q5FWF5 840 aa20.91■□□□□ 0.94
CALR-201ENST00000316448 C19orf44Q9H6X5 657 aa20.91■□□□□ 0.94
CALR-201ENST00000316448 RRS1Q15050 365 aaKnown RBP20.9■□□□□ 0.94
CALR-201ENST00000316448 AATKQ6ZMQ8 1374 aa20.9■□□□□ 0.94
CALR-201ENST00000316448 TTC21AQ8NDW8 1320 aa20.9■□□□□ 0.94
CALR-201ENST00000316448 NUDCQ9Y266 331 aa20.9■□□□□ 0.94
CALR-201ENST00000316448 MAP2P11137 1827 aaKnown RBP20.89■□□□□ 0.94
CALR-201ENST00000316448 APAF1O14727 1248 aa20.89■□□□□ 0.93
CALR-201ENST00000316448 PPM1GO15355 546 aaPredicted RBP20.88■□□□□ 0.93
CALR-201ENST00000316448 CDCA7LQ96GN5 454 aa20.88■□□□□ 0.93
CALR-201ENST00000316448 ZNF335Q9H4Z2 1342 aaPredicted RBP20.87■□□□□ 0.93
CALR-201ENST00000316448 USP31Q70CQ4 1352 aa20.86■□□□□ 0.93
CALR-201ENST00000316448 U2AF1L5P0DN76 240 aaPredicted RBP20.86■□□□□ 0.93
CALR-201ENST00000316448 U2AF1Q01081 240 aaKnown RBP eCLIP20.86■□□□□ 0.939e-17■■■■□ 23.3
CALR-201ENST00000316448 PIK3C2AO00443 1686 aa20.85■□□□□ 0.93
CALR-201ENST00000316448 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
CALR-201ENST00000316448 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
CALR-201ENST00000316448 C1orf167Q5SNV9 1468 aa20.85■□□□□ 0.93
CALR-201ENST00000316448 ZNF521Q96K83 1311 aa20.84■□□□□ 0.93
CALR-201ENST00000316448 U2SURPO15042 1029 aaKnown RBP20.84■□□□□ 0.93
CALR-201ENST00000316448 NCOA3Q9Y6Q9 1424 aa20.84■□□□□ 0.93
CALR-201ENST00000316448 SOX12O15370 315 aa20.82■□□□□ 0.92
CALR-201ENST00000316448 FOXO3O43524 673 aa20.82■□□□□ 0.92
CALR-201ENST00000316448 PAK3O75914 559 aaPredicted RBP20.82■□□□□ 0.92
CALR-201ENST00000316448 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
CALR-201ENST00000316448 MST1RQ04912 1400 aa20.82■□□□□ 0.92
CALR-201ENST00000316448 NLRP6P59044 892 aa20.82■□□□□ 0.92
CALR-201ENST00000316448 XPCQ01831 940 aaPredicted RBP20.82■□□□□ 0.92
CALR-201ENST00000316448 PSME1Q06323 249 aa20.82■□□□□ 0.92
CALR-201ENST00000316448 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
CALR-201ENST00000316448 IL13P35225 146 aa20.81■□□□□ 0.92
CALR-201ENST00000316448 PDE3BQ13370 1112 aa20.81■□□□□ 0.92
CALR-201ENST00000316448 LRRC7Q96NW7 1537 aa20.8■□□□□ 0.92
CALR-201ENST00000316448 ATF3P18847 181 aa20.8■□□□□ 0.92
CALR-201ENST00000316448 ABTB2Q8N961 1025 aa20.8■□□□□ 0.92
CALR-201ENST00000316448 PLEKHF1Q96S99 279 aa20.8■□□□□ 0.92
CALR-201ENST00000316448 MARF1Q9Y4F3 1742 aaKnown RBP20.8■□□□□ 0.92
CALR-201ENST00000316448 CDK12Q9NYV4 1490 aaPredicted RBP20.8■□□□□ 0.92
CALR-201ENST00000316448 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
CALR-201ENST00000316448 RNF123Q5XPI4 1314 aa20.8■□□□□ 0.92
CALR-201ENST00000316448 RRP7AQ9Y3A4 280 aaKnown RBP20.79■□□□□ 0.92
CALR-201ENST00000316448 ERICH6BQ5W0A0 696 aa20.78■□□□□ 0.92
CALR-201ENST00000316448 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
CALR-201ENST00000316448 PEAK1Q9H792 1746 aa20.78■□□□□ 0.92
CALR-201ENST00000316448 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
CALR-201ENST00000316448 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
CALR-201ENST00000316448 DCCP43146 1447 aa20.77■□□□□ 0.92
CALR-201ENST00000316448 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
CALR-201ENST00000316448 DDX17Q92841 729 aaKnown RBP20.76■□□□□ 0.91
CALR-201ENST00000316448 HSP90AB2PQ58FF8 381 aa20.76■□□□□ 0.91
CALR-201ENST00000316448 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
CALR-201ENST00000316448 KRT28Q7Z3Y7 464 aa20.75■□□□□ 0.91
CALR-201ENST00000316448 CADPS2Q86UW7 1296 aa20.75■□□□□ 0.91
CALR-201ENST00000316448 MSH6P52701 1360 aa20.74■□□□□ 0.91
CALR-201ENST00000316448 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
CALR-201ENST00000316448 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
CALR-201ENST00000316448 RSPH6AQ9H0K4 717 aa20.74■□□□□ 0.91
CALR-201ENST00000316448 USP54Q70EL1 1684 aa20.74■□□□□ 0.91
CALR-201ENST00000316448 HMOX1P09601 288 aa20.73■□□□□ 0.91
CALR-201ENST00000316448 WWC1Q8IX03 1113 aa20.73■□□□□ 0.91
CALR-201ENST00000316448 FCHSD2O94868 740 aa20.72■□□□□ 0.91
CALR-201ENST00000316448 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
CALR-201ENST00000316448 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
CALR-201ENST00000316448 SLFN5Q08AF3 891 aa20.72■□□□□ 0.91
CALR-201ENST00000316448 DUSP27Q5VZP5 1158 aa20.71■□□□□ 0.91
CALR-201ENST00000316448 TRMT2AQ8IZ69 625 aaKnown RBP20.71■□□□□ 0.91
CALR-201ENST00000316448 TRPM3Q9HCF6 1732 aaPredicted RBP20.7■□□□□ 0.9
CALR-201ENST00000316448 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
CALR-201ENST00000316448 NGEFQ8N5V2 710 aa20.7■□□□□ 0.9
CALR-201ENST00000316448 KIF1AQ12756 1690 aa20.7■□□□□ 0.9
CALR-201ENST00000316448 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
CALR-201ENST00000316448 PHACTR3Q96KR7 559 aa20.69■□□□□ 0.9
CALR-201ENST00000316448 SBNO1A3KN83 1393 aa20.69■□□□□ 0.9
CALR-201ENST00000316448 PELP1Q8IZL8 1130 aaKnown RBP20.68■□□□□ 0.9
CALR-201ENST00000316448 AMPHP49418 695 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms