RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 MON2Q7Z3U7 1717 aa13.02□□□□□ -0.32
MMP1-201ENST00000315274 LMOD2Q6P5Q4 547 aa13.02□□□□□ -0.32
MMP1-201ENST00000315274 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
MMP1-201ENST00000315274 EDC4Q6P2E9 1401 aaKnown RBP13.02□□□□□ -0.33
MMP1-201ENST00000315274 FYB1O15117 783 aa13.01□□□□□ -0.33
MMP1-201ENST00000315274 NME9Q86XW9 330 aa13.01□□□□□ -0.33
MMP1-201ENST00000315274 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
MMP1-201ENST00000315274 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
MMP1-201ENST00000315274 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
MMP1-201ENST00000315274 ABTB2Q8N961 1025 aa13□□□□□ -0.33
MMP1-201ENST00000315274 PLEKHG5O94827 1062 aa13□□□□□ -0.33
MMP1-201ENST00000315274 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
MMP1-201ENST00000315274 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
MMP1-201ENST00000315274 ANP32CO43423 234 aa12.99□□□□□ -0.33
MMP1-201ENST00000315274 SSH2Q76I76 1423 aa12.98□□□□□ -0.33
MMP1-201ENST00000315274 NLRP6P59044 892 aa12.98□□□□□ -0.33
MMP1-201ENST00000315274 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
MMP1-201ENST00000315274 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
MMP1-201ENST00000315274 MORC1Q86VD1 984 aa12.98□□□□□ -0.33
MMP1-201ENST00000315274 PXDNQ92626 1479 aa12.97□□□□□ -0.33
MMP1-201ENST00000315274 NRKQ7Z2Y5 1582 aa12.97□□□□□ -0.33
MMP1-201ENST00000315274 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
MMP1-201ENST00000315274 COG3Q96JB2 828 aa12.97□□□□□ -0.33
MMP1-201ENST00000315274 NHSL1Q5SYE7 1610 aa12.97□□□□□ -0.33
MMP1-201ENST00000315274 KIF20BQ96Q89 1820 aa12.96□□□□□ -0.33
MMP1-201ENST00000315274 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.34
MMP1-201ENST00000315274 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.34
MMP1-201ENST00000315274 TRPM3Q9HCF6 1732 aaPredicted RBP12.95□□□□□ -0.34
MMP1-201ENST00000315274 SBNO1A3KN83 1393 aa12.95□□□□□ -0.34
MMP1-201ENST00000315274 SOX12O15370 315 aa12.95□□□□□ -0.34
MMP1-201ENST00000315274 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
MMP1-201ENST00000315274 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
MMP1-201ENST00000315274 PHLPP1O60346 1717 aa12.95□□□□□ -0.34
MMP1-201ENST00000315274 NSD2O96028 1365 aa12.94□□□□□ -0.34
MMP1-201ENST00000315274 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
MMP1-201ENST00000315274 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
MMP1-201ENST00000315274 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
MMP1-201ENST00000315274 AHDC1Q5TGY3 1603 aaPredicted RBP12.94□□□□□ -0.34
MMP1-201ENST00000315274 FBLN1P23142 703 aa12.93□□□□□ -0.34
MMP1-201ENST00000315274 RALBP1Q15311 655 aa12.93□□□□□ -0.34
MMP1-201ENST00000315274 MIER1Q8N108 512 aa12.92□□□□□ -0.34
MMP1-201ENST00000315274 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
MMP1-201ENST00000315274 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
MMP1-201ENST00000315274 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
MMP1-201ENST00000315274 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
MMP1-201ENST00000315274 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
MMP1-201ENST00000315274 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
MMP1-201ENST00000315274 HSPA1LP34931 641 aa12.9□□□□□ -0.34
MMP1-201ENST00000315274 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
MMP1-201ENST00000315274 OVOS2A0A0J9YW53 1432 aa12.9□□□□□ -0.34
MMP1-201ENST00000315274 OVOS2Q6IE36 1432 aa12.9□□□□□ -0.34
MMP1-201ENST00000315274 GCP02774 474 aa12.89□□□□□ -0.35
MMP1-201ENST00000315274 COL16A1Q07092 1604 aaPredicted RBP12.89□□□□□ -0.35
MMP1-201ENST00000315274 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
MMP1-201ENST00000315274 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
MMP1-201ENST00000315274 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
MMP1-201ENST00000315274 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
MMP1-201ENST00000315274 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
MMP1-201ENST00000315274 MAP2P11137 1827 aaKnown RBP12.89□□□□□ -0.35
MMP1-201ENST00000315274 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
MMP1-201ENST00000315274 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
MMP1-201ENST00000315274 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
MMP1-201ENST00000315274 USP19O94966 1318 aa12.87□□□□□ -0.35
MMP1-201ENST00000315274 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
MMP1-201ENST00000315274 MED1Q15648 1581 aaPredicted RBP12.86□□□□□ -0.35
MMP1-201ENST00000315274 MTHFSP49914 203 aa12.86□□□□□ -0.35
MMP1-201ENST00000315274 FBXO41Q8TF61 875 aa12.86□□□□□ -0.35
MMP1-201ENST00000315274 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
MMP1-201ENST00000315274 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
MMP1-201ENST00000315274 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
MMP1-201ENST00000315274 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
MMP1-201ENST00000315274 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
MMP1-201ENST00000315274 NUTM2AQ8IVF1 878 aaPredicted RBP12.85□□□□□ -0.35
MMP1-201ENST00000315274 AMPHP49418 695 aa12.84□□□□□ -0.35
MMP1-201ENST00000315274 MAP3K19Q56UN5 1328 aa12.84□□□□□ -0.35
MMP1-201ENST00000315274 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
MMP1-201ENST00000315274 JCADQ9P266 1359 aa12.84□□□□□ -0.35
MMP1-201ENST00000315274 SLIT3O75094 1523 aa12.84□□□□□ -0.35
MMP1-201ENST00000315274 CCDC184Q52MB2 194 aa12.83□□□□□ -0.35
MMP1-201ENST00000315274 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.36
MMP1-201ENST00000315274 ADAMTS2O95450 1211 aa12.82□□□□□ -0.36
MMP1-201ENST00000315274 ARHGEF25Q86VW2 580 aa12.82□□□□□ -0.36
MMP1-201ENST00000315274 MRS2Q9HD23 443 aa12.82□□□□□ -0.36
MMP1-201ENST00000315274 LTN1O94822 1766 aa12.82□□□□□ -0.36
MMP1-201ENST00000315274 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
MMP1-201ENST00000315274 CHRNA2Q15822 529 aa12.81□□□□□ -0.36
MMP1-201ENST00000315274 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
MMP1-201ENST00000315274 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
MMP1-201ENST00000315274 NFAT5O94916 1531 aa12.81□□□□□ -0.36
MMP1-201ENST00000315274 KIAA0232Q92628 1395 aa12.81□□□□□ -0.36
MMP1-201ENST00000315274 COL22A1Q8NFW1 1626 aaPredicted RBP12.81□□□□□ -0.36
MMP1-201ENST00000315274 SHPRHQ149N8 1683 aa12.81□□□□□ -0.36
MMP1-201ENST00000315274 ABCA3Q99758 1704 aa12.8□□□□□ -0.36
MMP1-201ENST00000315274 CCER2I3L3R5 266 aa12.8□□□□□ -0.36
MMP1-201ENST00000315274 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
MMP1-201ENST00000315274 HOXC9P31274 260 aa12.8□□□□□ -0.36
MMP1-201ENST00000315274 FAM83GA6ND36 823 aa12.79□□□□□ -0.36
MMP1-201ENST00000315274 IP6K1Q92551 441 aa12.79□□□□□ -0.36
MMP1-201ENST00000315274 LTV1Q96GA3 475 aaPredicted RBP12.79□□□□□ -0.36
MMP1-201ENST00000315274 FLT4P35916 1363 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms