RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
BDNF-201ENST00000314915 PPP2R5AQ15172 486 aa11.27□□□□□ -0.61
BDNF-201ENST00000314915 KIF18AQ8NI77 898 aa11.27□□□□□ -0.61
BDNF-201ENST00000314915 TPM3P06753 285 aa11.26□□□□□ -0.61
BDNF-201ENST00000314915 ZC3H12AQ5D1E8 599 aaKnown RBP11.26□□□□□ -0.61
BDNF-201ENST00000314915 RINLQ6ZS11 566 aa11.26□□□□□ -0.61
BDNF-201ENST00000314915 RABEP1Q15276 862 aa11.26□□□□□ -0.61
BDNF-201ENST00000314915 HSCBQ8IWL3 235 aa11.26□□□□□ -0.61
BDNF-201ENST00000314915 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
BDNF-201ENST00000314915 CCDC27Q2M243 656 aa11.26□□□□□ -0.61
BDNF-201ENST00000314915 NEFHP12036 1026 aa11.26□□□□□ -0.61
BDNF-201ENST00000314915 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
BDNF-201ENST00000314915 EIF4G2P78344 907 aaKnown RBP eCLIP11.25□□□□□ -0.61
BDNF-201ENST00000314915 SUGP1Q8IWZ8 645 aaKnown RBP11.25□□□□□ -0.61
BDNF-201ENST00000314915 SPTLC3Q9NUV7 552 aa11.25□□□□□ -0.61
BDNF-201ENST00000314915 SENP3-EIF4A1A0A087X0R7 540 aa11.25□□□□□ -0.61
BDNF-201ENST00000314915 FAM184AQ8NB25 1140 aa11.25□□□□□ -0.61
BDNF-201ENST00000314915 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
BDNF-201ENST00000314915 MAP3K1Q13233 1512 aa11.24□□□□□ -0.61
BDNF-201ENST00000314915 ARMCX6Q7L4S7 300 aa11.24□□□□□ -0.61
BDNF-201ENST00000314915 POLKQ9UBT6 870 aa11.24□□□□□ -0.61
BDNF-201ENST00000314915 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.24□□□□□ -0.61
BDNF-201ENST00000314915 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
BDNF-201ENST00000314915 FAM177BA6PVY3 158 aa11.24□□□□□ -0.61
BDNF-201ENST00000314915 GPS2Q13227 327 aa11.24□□□□□ -0.61
BDNF-201ENST00000314915 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
BDNF-201ENST00000314915 TACO1Q9BSH4 297 aaKnown RBP11.24□□□□□ -0.61
BDNF-201ENST00000314915 SUDS3Q9H7L9 328 aaPredicted RBP11.24□□□□□ -0.61
BDNF-201ENST00000314915 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
BDNF-201ENST00000314915 GYS2P54840 703 aa11.23□□□□□ -0.61
BDNF-201ENST00000314915 WIZO95785 1651 aa11.23□□□□□ -0.61
BDNF-201ENST00000314915 ERCC4Q92889 916 aaPredicted RBP11.23□□□□□ -0.61
BDNF-201ENST00000314915 SYT10Q6XYQ8 523 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 NLRP1Q9C000 1473 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 RAB3GAP1Q15042 981 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 JAKMIP3Q5VZ66 844 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.22□□□□□ -0.61
BDNF-201ENST00000314915 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 ZMYM3Q14202 1370 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 COQ9O75208 318 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 IRX1P78414 480 aaPredicted RBP11.22□□□□□ -0.61
BDNF-201ENST00000314915 NCBP1Q09161 790 aaKnown RBP11.22□□□□□ -0.61
BDNF-201ENST00000314915 C20orf194Q5TEA3 1177 aa11.22□□□□□ -0.61
BDNF-201ENST00000314915 SART3Q15020 963 aaKnown RBP11.21□□□□□ -0.61
BDNF-201ENST00000314915 RBSNQ9H1K0 784 aa11.21□□□□□ -0.61
BDNF-201ENST00000314915 CCDC7Q96M83 1385 aa11.21□□□□□ -0.61
BDNF-201ENST00000314915 MAP9Q49MG5 647 aa11.21□□□□□ -0.61
BDNF-201ENST00000314915 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.21□□□□□ -0.62
BDNF-201ENST00000314915 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.62
BDNF-201ENST00000314915 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.62
BDNF-201ENST00000314915 MKL1Q969V6 931 aa11.2□□□□□ -0.62
BDNF-201ENST00000314915 ERCC3P19447 782 aa11.2□□□□□ -0.62
BDNF-201ENST00000314915 MAGEA9P43362 315 aa11.2□□□□□ -0.62
BDNF-201ENST00000314915 TSPAN18Q96SJ8 248 aa11.2□□□□□ -0.62
BDNF-201ENST00000314915 ZSCAN26Q16670 478 aa11.19□□□□□ -0.62
BDNF-201ENST00000314915 NUCB2P80303 420 aa11.19□□□□□ -0.62
BDNF-201ENST00000314915 ANKRD33BA6NCL7 494 aa11.19□□□□□ -0.62
BDNF-201ENST00000314915 SEC24BO95487 1268 aa11.19□□□□□ -0.62
BDNF-201ENST00000314915 SRLQ86TD4 932 aa11.19□□□□□ -0.62
BDNF-201ENST00000314915 TRIM66O15016 1216 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 ZSCAN23Q3MJ62 389 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 CLEC17AQ6ZS10 378 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
BDNF-201ENST00000314915 DDIT3P35638 169 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 KRBA2Q6ZNG9 492 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 CCDC191Q8NCU4 936 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 KIF21BO75037 1637 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 PPM1EQ8WY54 764 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 ZNF446Q9NWS9 450 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 TPM4P67936 248 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
BDNF-201ENST00000314915 KANK1Q14678 1352 aa11.17□□□□□ -0.62
BDNF-201ENST00000314915 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
BDNF-201ENST00000314915 RPS6KL1Q9Y6S9 549 aa11.17□□□□□ -0.62
BDNF-201ENST00000314915 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
BDNF-201ENST00000314915 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
BDNF-201ENST00000314915 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
BDNF-201ENST00000314915 PLIN1O60240 522 aa11.17□□□□□ -0.62
BDNF-201ENST00000314915 TPM1P09493 284 aa11.17□□□□□ -0.62
BDNF-201ENST00000314915 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
BDNF-201ENST00000314915 CCDC97Q96F63 343 aaPredicted RBP11.17□□□□□ -0.62
BDNF-201ENST00000314915 TEX13AQ9BXU3 409 aaPredicted RBP11.17□□□□□ -0.62
BDNF-201ENST00000314915 RRP15Q9Y3B9 282 aaKnown RBP11.17□□□□□ -0.62
BDNF-201ENST00000314915 SETSIPP0DME0 302 aa11.16□□□□□ -0.62
BDNF-201ENST00000314915 V9GYY5 206 aaPredicted RBP11.16□□□□□ -0.62
BDNF-201ENST00000314915 EIF3JO75822 258 aaKnown RBP11.16□□□□□ -0.62
BDNF-201ENST00000314915 USP8P40818 1118 aa11.16□□□□□ -0.62
BDNF-201ENST00000314915 ARHGAP31Q2M1Z3 1444 aa11.16□□□□□ -0.62
BDNF-201ENST00000314915 RAPGEF2Q9Y4G8 1499 aa11.16□□□□□ -0.62
BDNF-201ENST00000314915 FMNL3Q8IVF7 1028 aa11.16□□□□□ -0.62
BDNF-201ENST00000314915 CCP110O43303 1012 aa11.15□□□□□ -0.62
BDNF-201ENST00000314915 ZRSR2Q15696 482 aaKnown RBP11.15□□□□□ -0.62
BDNF-201ENST00000314915 E2F4Q16254 413 aa11.15□□□□□ -0.62
BDNF-201ENST00000314915 AP1ARQ63HQ0 302 aa11.15□□□□□ -0.62
BDNF-201ENST00000314915 LRSAM1Q6UWE0 723 aa11.15□□□□□ -0.62
BDNF-201ENST00000314915 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms