RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 RARSP54136 660 aaKnown RBP14.77□□□□□ -0.04
EBF1-201ENST00000313708 TXLNBQ8N3L3 684 aa14.77□□□□□ -0.04
EBF1-201ENST00000313708 TCP11L2Q8N4U5 519 aa14.77□□□□□ -0.05
EBF1-201ENST00000313708 RSPH14Q9UHP6 348 aa14.77□□□□□ -0.05
EBF1-201ENST00000313708 HDAC5Q9UQL6 1122 aa14.77□□□□□ -0.05
EBF1-201ENST00000313708 USP19O94966 1318 aa14.77□□□□□ -0.05
EBF1-201ENST00000313708 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.05
EBF1-201ENST00000313708 RNF20Q5VTR2 975 aa14.77□□□□□ -0.05
EBF1-201ENST00000313708 PAXBP1Q9Y5B6 917 aa14.76□□□□□ -0.05
EBF1-201ENST00000313708 CFTRP13569 1480 aa14.76□□□□□ -0.05
EBF1-201ENST00000313708 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
EBF1-201ENST00000313708 ZNF397Q8NF99 534 aaPredicted RBP14.76□□□□□ -0.05
EBF1-201ENST00000313708 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
EBF1-201ENST00000313708 H0YHG0 523 aa14.75□□□□□ -0.05
EBF1-201ENST00000313708 BRD2P25440 801 aaKnown RBP14.75□□□□□ -0.05
EBF1-201ENST00000313708 CCDC191Q8NCU4 936 aa14.75□□□□□ -0.05
EBF1-201ENST00000313708 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
EBF1-201ENST00000313708 CEP135Q66GS9 1140 aa14.75□□□□□ -0.05
EBF1-201ENST00000313708 ANKRD30BQ9BXX2 1392 aa14.75□□□□□ -0.05
EBF1-201ENST00000313708 WWC1Q8IX03 1113 aa14.75□□□□□ -0.05
EBF1-201ENST00000313708 TMEM51Q9NW97 253 aa14.75□□□□□ -0.05
EBF1-201ENST00000313708 WDR33Q9C0J8 1336 aaKnown RBP14.75□□□□□ -0.05
EBF1-201ENST00000313708 CLGNO14967 610 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 FBLN2P98095 1184 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 CASKIN1Q8WXD9 1431 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 UBXN4Q92575 508 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 GTF3C6Q969F1 213 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 TBC1D9Q6ZT07 1266 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 LMAN1P49257 510 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 TTLL5Q6EMB2 1281 aa14.74□□□□□ -0.05
EBF1-201ENST00000313708 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
EBF1-201ENST00000313708 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
EBF1-201ENST00000313708 KIF18AQ8NI77 898 aa14.73□□□□□ -0.05
EBF1-201ENST00000313708 GCC1Q96CN9 775 aa14.73□□□□□ -0.05
EBF1-201ENST00000313708 CTR9Q6PD62 1173 aa14.73□□□□□ -0.05
EBF1-201ENST00000313708 EXOSC9Q06265 439 aaKnown RBP14.73□□□□□ -0.05
EBF1-201ENST00000313708 DHX37Q8IY37 1157 aaKnown RBP14.73□□□□□ -0.05
EBF1-201ENST00000313708 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
EBF1-201ENST00000313708 MCM2P49736 904 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 HSP90AB3PQ58FF7 597 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 KRBA2Q6ZNG9 492 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 FILIP1Q7Z7B0 1213 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 FYCO1Q9BQS8 1478 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 SMTNL1A8MU46 457 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 HSP90B1P14625 803 aaKnown RBP14.72□□□□□ -0.05
EBF1-201ENST00000313708 OS9Q13438 667 aaPredicted RBP14.72□□□□□ -0.05
EBF1-201ENST00000313708 HMMRO75330 724 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 DRC1Q96MC2 740 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 TNNQ9UQP3 1299 aa14.72□□□□□ -0.05
EBF1-201ENST00000313708 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
EBF1-201ENST00000313708 RPRD2Q5VT52 1461 aaKnown RBP14.71□□□□□ -0.05
EBF1-201ENST00000313708 LRRFIP2Q9Y608 721 aaKnown RBP14.71□□□□□ -0.05
EBF1-201ENST00000313708 CAMK4Q16566 473 aa14.71□□□□□ -0.06
EBF1-201ENST00000313708 ATF7IPQ6VMQ6 1270 aa14.71□□□□□ -0.06
EBF1-201ENST00000313708 CCDC144AA2RUR9 1427 aa14.7□□□□□ -0.06
EBF1-201ENST00000313708 TTC31Q49AM3 519 aaPredicted RBP14.7□□□□□ -0.06
EBF1-201ENST00000313708 GIMAP7Q8NHV1 300 aa14.7□□□□□ -0.06
EBF1-201ENST00000313708 IGF1RP08069 1367 aa14.7□□□□□ -0.06
EBF1-201ENST00000313708 TNMDQ9H2S6 317 aa14.7□□□□□ -0.06
EBF1-201ENST00000313708 ZNF644Q9H582 1327 aaPredicted RBP14.7□□□□□ -0.06
EBF1-201ENST00000313708 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
EBF1-201ENST00000313708 PTPRKQ15262 1439 aa14.7□□□□□ -0.06
EBF1-201ENST00000313708 AXDND1Q5T1B0 1012 aaPredicted RBP14.69□□□□□ -0.06
EBF1-201ENST00000313708 CLIP2Q9UDT6 1046 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 CCDC186Q7Z3E2 898 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 USP8P40818 1118 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 BANK1Q8NDB2 785 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 TMEM63CQ9P1W3 806 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 PTGS1P23219 599 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 ACBD3Q9H3P7 528 aa14.69□□□□□ -0.06
EBF1-201ENST00000313708 PARD3Q8TEW0 1356 aa14.68□□□□□ -0.06
EBF1-201ENST00000313708 ZGPATQ8N5A5 531 aaKnown RBP14.68□□□□□ -0.06
EBF1-201ENST00000313708 BMP2KLQ5H9B9 411 aa14.68□□□□□ -0.06
EBF1-201ENST00000313708 GIMAP6Q6P9H5 292 aa14.68□□□□□ -0.06
EBF1-201ENST00000313708 NOC3LQ8WTT2 800 aaKnown RBP14.68□□□□□ -0.06
EBF1-201ENST00000313708 FAM177A1Q8N128 213 aaPredicted RBP14.68□□□□□ -0.06
EBF1-201ENST00000313708 SLC26A8Q96RN1 970 aa14.68□□□□□ -0.06
EBF1-201ENST00000313708 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.68□□□□□ -0.06
EBF1-201ENST00000313708 RLBP1P12271 317 aa14.67□□□□□ -0.06
EBF1-201ENST00000313708 TDO2P48775 406 aa14.67□□□□□ -0.06
EBF1-201ENST00000313708 ERC2O15083 957 aa14.67□□□□□ -0.06
EBF1-201ENST00000313708 MYCBPQ99417 103 aaPredicted RBP14.67□□□□□ -0.06
EBF1-201ENST00000313708 NUP62CLQ9H1M0 184 aa14.67□□□□□ -0.06
EBF1-201ENST00000313708 PCF11O94913 1555 aaKnown RBP14.67□□□□□ -0.06
EBF1-201ENST00000313708 SECISBP2LQ93073 1101 aaKnown RBP14.67□□□□□ -0.06
EBF1-201ENST00000313708 SMC2O95347 1197 aa14.67□□□□□ -0.06
EBF1-201ENST00000313708 IBSPP21815 317 aaPredicted RBP14.67□□□□□ -0.06
EBF1-201ENST00000313708 SLC4A10Q6U841 1118 aa14.67□□□□□ -0.06
EBF1-201ENST00000313708 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
EBF1-201ENST00000313708 H3BQV1 296 aa14.66□□□□□ -0.06
EBF1-201ENST00000313708 IFFO2Q5TF58 517 aa14.66□□□□□ -0.06
EBF1-201ENST00000313708 TEX2Q8IWB9 1127 aa14.66□□□□□ -0.06
EBF1-201ENST00000313708 KDM4AO75164 1064 aa14.66□□□□□ -0.06
EBF1-201ENST00000313708 MNAT1P51948 309 aa14.66□□□□□ -0.06
EBF1-201ENST00000313708 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
EBF1-201ENST00000313708 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
EBF1-201ENST00000313708 KIAA1107Q9UPP5 1409 aa14.65□□□□□ -0.06
EBF1-201ENST00000313708 A0A1B0GUL7 405 aa14.65□□□□□ -0.06
EBF1-201ENST00000313708 USP48Q86UV5 1035 aa14.65□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms