RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
TPM3-203ENST00000312970 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
TPM3-203ENST00000312970 LRP5O75197 1615 aa11.82□□□□□ -0.52
TPM3-203ENST00000312970 FAM83GA6ND36 823 aa11.82□□□□□ -0.52
TPM3-203ENST00000312970 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
TPM3-203ENST00000312970 PRR36Q9H6K5 1346 aa11.82□□□□□ -0.52
TPM3-203ENST00000312970 ADGRB2O60241 1585 aa11.81□□□□□ -0.52
TPM3-203ENST00000312970 VPS72Q15906 364 aa11.81□□□□□ -0.52
TPM3-203ENST00000312970 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
TPM3-203ENST00000312970 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
TPM3-203ENST00000312970 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
TPM3-203ENST00000312970 SEPT12Q8IYM1 358 aa11.8□□□□□ -0.52
TPM3-203ENST00000312970 CDK19Q9BWU1 502 aa11.8□□□□□ -0.52
TPM3-203ENST00000312970 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
TPM3-203ENST00000312970 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
TPM3-203ENST00000312970 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
TPM3-203ENST00000312970 SF3B2Q13435 895 aaKnown RBP11.79□□□□□ -0.52
TPM3-203ENST00000312970 TULP4Q9NRJ4 1543 aa11.79□□□□□ -0.52
TPM3-203ENST00000312970 ALS2Q96Q42 1657 aa11.78□□□□□ -0.52
TPM3-203ENST00000312970 PLCB2Q00722 1185 aa11.77□□□□□ -0.53
TPM3-203ENST00000312970 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.53
TPM3-203ENST00000312970 BTG4Q9NY30 223 aa11.77□□□□□ -0.53
TPM3-203ENST00000312970 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
TPM3-203ENST00000312970 CRYBG1Q9Y4K1 1723 aa11.76□□□□□ -0.53
TPM3-203ENST00000312970 COL14A1Q05707 1796 aaKnown RBP11.76□□□□□ -0.53
TPM3-203ENST00000312970 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
TPM3-203ENST00000312970 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
TPM3-203ENST00000312970 NBPF8Q3BBV2 869 aa11.75□□□□□ -0.53
TPM3-203ENST00000312970 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
TPM3-203ENST00000312970 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
TPM3-203ENST00000312970 ARHGEF28Q8N1W1 1705 aaKnown RBP11.74□□□□□ -0.53
TPM3-203ENST00000312970 ACEP12821 1306 aa11.74□□□□□ -0.53
TPM3-203ENST00000312970 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
TPM3-203ENST00000312970 A0A0G2JS52 829 aa11.73□□□□□ -0.53
TPM3-203ENST00000312970 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
TPM3-203ENST00000312970 ATP7BP35670 1465 aa11.73□□□□□ -0.53
TPM3-203ENST00000312970 MYT1Q01538 1121 aa11.73□□□□□ -0.53
TPM3-203ENST00000312970 EN1Q05925 392 aaPredicted RBP11.73□□□□□ -0.53
TPM3-203ENST00000312970 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
TPM3-203ENST00000312970 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
TPM3-203ENST00000312970 PRDM11Q9NQV5 511 aa11.73□□□□□ -0.53
TPM3-203ENST00000312970 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
TPM3-203ENST00000312970 CENPJQ9HC77 1338 aaPredicted RBP11.72□□□□□ -0.53
TPM3-203ENST00000312970 BAG6P46379 1132 aa11.72□□□□□ -0.53
TPM3-203ENST00000312970 SRPK2P78362 688 aaKnown RBP11.72□□□□□ -0.53
TPM3-203ENST00000312970 R3HDM1Q15032 1099 aaKnown RBP11.72□□□□□ -0.53
TPM3-203ENST00000312970 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
TPM3-203ENST00000312970 UTRNP46939 3433 aa11.71□□□□□ -0.53
TPM3-203ENST00000312970 SPATA31A5Q5VU36 1347 aa11.71□□□□□ -0.53
TPM3-203ENST00000312970 SPATA31A7Q8IWB4 1347 aa11.71□□□□□ -0.53
TPM3-203ENST00000312970 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
TPM3-203ENST00000312970 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
TPM3-203ENST00000312970 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.54
TPM3-203ENST00000312970 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
TPM3-203ENST00000312970 FAM182BQ5T319 152 aa11.7□□□□□ -0.54
TPM3-203ENST00000312970 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
TPM3-203ENST00000312970 PHRF1Q9P1Y6 1649 aaKnown RBP11.7□□□□□ -0.54
TPM3-203ENST00000312970 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
TPM3-203ENST00000312970 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
TPM3-203ENST00000312970 EVA1CP58658 441 aa11.69□□□□□ -0.54
TPM3-203ENST00000312970 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
TPM3-203ENST00000312970 CHRNA2Q15822 529 aa11.69□□□□□ -0.54
TPM3-203ENST00000312970 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
TPM3-203ENST00000312970 YY1P25490 414 aa11.68□□□□□ -0.54
TPM3-203ENST00000312970 STRN4Q9NRL3 753 aa11.68□□□□□ -0.54
TPM3-203ENST00000312970 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
TPM3-203ENST00000312970 SPATA31A1Q5TZJ5 1347 aa11.67□□□□□ -0.54
TPM3-203ENST00000312970 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
TPM3-203ENST00000312970 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
TPM3-203ENST00000312970 EVC2Q86UK5 1308 aa11.66□□□□□ -0.54
TPM3-203ENST00000312970 GCP02774 474 aa11.66□□□□□ -0.54
TPM3-203ENST00000312970 EZH2Q15910 746 aaKnown RBP11.66□□□□□ -0.54
TPM3-203ENST00000312970 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
TPM3-203ENST00000312970 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
TPM3-203ENST00000312970 USP19O94966 1318 aa11.64□□□□□ -0.55
TPM3-203ENST00000312970 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
TPM3-203ENST00000312970 NLRP6P59044 892 aa11.64□□□□□ -0.55
TPM3-203ENST00000312970 CAMKK2Q96RR4 588 aa11.64□□□□□ -0.55
TPM3-203ENST00000312970 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
TPM3-203ENST00000312970 USP35Q9P2H5 1018 aa11.64□□□□□ -0.55
TPM3-203ENST00000312970 CPDO75976 1380 aa11.64□□□□□ -0.55
TPM3-203ENST00000312970 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
TPM3-203ENST00000312970 BARGINQ6ZT62 677 aa11.63□□□□□ -0.55
TPM3-203ENST00000312970 ROCK2O75116 1388 aaKnown RBP11.63□□□□□ -0.55
TPM3-203ENST00000312970 NRKQ7Z2Y5 1582 aa11.62□□□□□ -0.55
TPM3-203ENST00000312970 PDE3BQ13370 1112 aa11.62□□□□□ -0.55
TPM3-203ENST00000312970 LARP1Q6PKG0 1096 aaKnown RBP11.62□□□□□ -0.55
TPM3-203ENST00000312970 TCP11L2Q8N4U5 519 aa11.62□□□□□ -0.55
TPM3-203ENST00000312970 THRAP3Q9Y2W1 955 aaKnown RBP11.62□□□□□ -0.55
TPM3-203ENST00000312970 QRICH2Q9H0J4 1663 aa11.62□□□□□ -0.55
TPM3-203ENST00000312970 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
TPM3-203ENST00000312970 RREB1Q92766 1687 aa11.61□□□□□ -0.55
TPM3-203ENST00000312970 CAMTA1Q9Y6Y1 1673 aa11.61□□□□□ -0.55
TPM3-203ENST00000312970 USP6P35125 1406 aa11.6□□□□□ -0.55
TPM3-203ENST00000312970 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
TPM3-203ENST00000312970 LMO7Q8WWI1 1683 aa11.6□□□□□ -0.55
TPM3-203ENST00000312970 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
TPM3-203ENST00000312970 TRIM37O94972 964 aa11.6□□□□□ -0.55
TPM3-203ENST00000312970 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
TPM3-203ENST00000312970 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms