RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ZRANB1Q9UGI0 708 aa22.1■■□□□ 1.13
CLCF1-201ENST00000312438 ZNF521Q96K83 1311 aa22.1■■□□□ 1.13
CLCF1-201ENST00000312438 AATKQ6ZMQ8 1374 aa22.1■■□□□ 1.13
CLCF1-201ENST00000312438 TOPAZ1Q8N9V7 1692 aa22.1■■□□□ 1.13
CLCF1-201ENST00000312438 KDM4FA0A1W2PPD8 638 aa22.09■■□□□ 1.13
CLCF1-201ENST00000312438 U2AF1L5P0DN76 240 aaPredicted RBP22.09■■□□□ 1.13
CLCF1-201ENST00000312438 U2AF1Q01081 240 aaKnown RBP eCLIP22.09■■□□□ 1.13
CLCF1-201ENST00000312438 KIF20BQ96Q89 1820 aa22.09■■□□□ 1.13
CLCF1-201ENST00000312438 NKTRP30414 1462 aaKnown RBP22.08■■□□□ 1.13
CLCF1-201ENST00000312438 DIAPH1O60610 1272 aaKnown RBP22.08■■□□□ 1.13
CLCF1-201ENST00000312438 MON2Q7Z3U7 1717 aa22.08■■□□□ 1.13
CLCF1-201ENST00000312438 TTC21AQ8NDW8 1320 aa22.08■■□□□ 1.12
CLCF1-201ENST00000312438 SSH2Q76I76 1423 aa22.07■■□□□ 1.12
CLCF1-201ENST00000312438 AKAP12Q02952 1782 aa22.07■■□□□ 1.12
CLCF1-201ENST00000312438 GOLGA2Q08379 1002 aa22.06■■□□□ 1.12
CLCF1-201ENST00000312438 RBM33Q96EV2 1170 aaKnown RBP22.06■■□□□ 1.12
CLCF1-201ENST00000312438 FBLN1P23142 703 aa22.06■■□□□ 1.12
CLCF1-201ENST00000312438 ERICH6BQ5W0A0 696 aa22.06■■□□□ 1.12
CLCF1-201ENST00000312438 SHPRHQ149N8 1683 aa22.05■■□□□ 1.12
CLCF1-201ENST00000312438 PPM1GO15355 546 aaPredicted RBP22.05■■□□□ 1.12
CLCF1-201ENST00000312438 ADGRL3Q9HAR2 1447 aa22.05■■□□□ 1.12
CLCF1-201ENST00000312438 ITSN1Q15811 1721 aa22.04■■□□□ 1.12
CLCF1-201ENST00000312438 COL3A1P02461 1466 aaPredicted RBP22.04■■□□□ 1.12
CLCF1-201ENST00000312438 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
CLCF1-201ENST00000312438 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
CLCF1-201ENST00000312438 PROSER2Q86WR7 435 aaPredicted RBP22.04■■□□□ 1.12
CLCF1-201ENST00000312438 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
CLCF1-201ENST00000312438 C14orf37Q86TY3 774 aa22.03■■□□□ 1.12
CLCF1-201ENST00000312438 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
CLCF1-201ENST00000312438 PNNQ9H307 717 aaKnown RBP22.03■■□□□ 1.12
CLCF1-201ENST00000312438 EMILIN1Q9Y6C2 1016 aa22.02■■□□□ 1.12
CLCF1-201ENST00000312438 PHF8Q9UPP1 1060 aa22.01■■□□□ 1.11
CLCF1-201ENST00000312438 HSPA2P54652 639 aa22.01■■□□□ 1.11
CLCF1-201ENST00000312438 RCAN3Q9UKA8 241 aa22.01■■□□□ 1.11
CLCF1-201ENST00000312438 NWD1Q149M9 1564 aa22■■□□□ 1.11
CLCF1-201ENST00000312438 SLFN5Q08AF3 891 aa22■■□□□ 1.11
CLCF1-201ENST00000312438 FMN2Q9NZ56 1722 aa22■■□□□ 1.11
CLCF1-201ENST00000312438 OVOS2A0A0J9YW53 1432 aa21.99■■□□□ 1.11
CLCF1-201ENST00000312438 OVOS2Q6IE36 1432 aa21.99■■□□□ 1.11
CLCF1-201ENST00000312438 IRX6P78412 446 aaPredicted RBP21.99■■□□□ 1.11
CLCF1-201ENST00000312438 RRS1Q15050 365 aaKnown RBP21.99■■□□□ 1.11
CLCF1-201ENST00000312438 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
CLCF1-201ENST00000312438 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
CLCF1-201ENST00000312438 PLEKHF1Q96S99 279 aa21.99■■□□□ 1.11
CLCF1-201ENST00000312438 NRKQ7Z2Y5 1582 aa21.98■■□□□ 1.11
CLCF1-201ENST00000312438 USP31Q70CQ4 1352 aa21.98■■□□□ 1.11
CLCF1-201ENST00000312438 FCHSD2O94868 740 aa21.98■■□□□ 1.11
CLCF1-201ENST00000312438 CCDC27Q2M243 656 aa21.98■■□□□ 1.11
CLCF1-201ENST00000312438 TRMT2AQ8IZ69 625 aaKnown RBP21.98■■□□□ 1.11
CLCF1-201ENST00000312438 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
CLCF1-201ENST00000312438 E9PSI1 815 aa21.96■■□□□ 1.11
CLCF1-201ENST00000312438 IL13P35225 146 aa21.96■■□□□ 1.11
CLCF1-201ENST00000312438 ESCO1Q5FWF5 840 aa21.96■■□□□ 1.11
CLCF1-201ENST00000312438 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
CLCF1-201ENST00000312438 NALCNQ8IZF0 1738 aa21.96■■□□□ 1.11
CLCF1-201ENST00000312438 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
CLCF1-201ENST00000312438 CDK12Q9NYV4 1490 aaPredicted RBP21.96■■□□□ 1.11
CLCF1-201ENST00000312438 RRP7AQ9Y3A4 280 aaKnown RBP21.94■■□□□ 1.1
CLCF1-201ENST00000312438 IQSEC2Q5JU85 1478 aa21.94■■□□□ 1.1
CLCF1-201ENST00000312438 WDR63Q8IWG1 891 aa21.94■■□□□ 1.1
CLCF1-201ENST00000312438 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
CLCF1-201ENST00000312438 NLRP6P59044 892 aa21.93■■□□□ 1.1
CLCF1-201ENST00000312438 NCOA3Q9Y6Q9 1424 aa21.92■■□□□ 1.1
CLCF1-201ENST00000312438 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
CLCF1-201ENST00000312438 PSME1Q06323 249 aa21.92■■□□□ 1.1
CLCF1-201ENST00000312438 ABTB2Q8N961 1025 aa21.92■■□□□ 1.1
CLCF1-201ENST00000312438 SPINK5Q9NQ38 1064 aaPredicted RBP21.92■■□□□ 1.1
CLCF1-201ENST00000312438 PAK3O75914 559 aaPredicted RBP21.91■■□□□ 1.1
CLCF1-201ENST00000312438 NEFMP07197 916 aa21.91■■□□□ 1.1
CLCF1-201ENST00000312438 LMTK3Q96Q04 1460 aa21.9■■□□□ 1.1
CLCF1-201ENST00000312438 TMPOP42166 694 aaKnown RBP21.9■■□□□ 1.1
CLCF1-201ENST00000312438 RSPH6AQ9H0K4 717 aa21.9■■□□□ 1.1
CLCF1-201ENST00000312438 MAP2P11137 1827 aaKnown RBP21.9■■□□□ 1.1
CLCF1-201ENST00000312438 RRP1P56182 461 aaKnown RBP21.9■■□□□ 1.1
CLCF1-201ENST00000312438 TMEM94Q12767 1356 aa21.88■■□□□ 1.09
CLCF1-201ENST00000312438 ORAI2Q96SN7 254 aa21.88■■□□□ 1.09
CLCF1-201ENST00000312438 DMRT2Q9Y5R5 561 aa21.88■■□□□ 1.09
CLCF1-201ENST00000312438 PRKAR2BP31323 418 aa21.87■■□□□ 1.09
CLCF1-201ENST00000312438 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
CLCF1-201ENST00000312438 ATF3P18847 181 aa21.87■■□□□ 1.09
CLCF1-201ENST00000312438 SOX12O15370 315 aa21.86■■□□□ 1.09
CLCF1-201ENST00000312438 MAP3K19Q56UN5 1328 aa21.86■■□□□ 1.09
CLCF1-201ENST00000312438 HMOX1P09601 288 aa21.85■■□□□ 1.09
CLCF1-201ENST00000312438 EIF4A2Q14240 407 aaKnown RBP21.85■■□□□ 1.09
CLCF1-201ENST00000312438 FOXO3O43524 673 aa21.85■■□□□ 1.09
CLCF1-201ENST00000312438 RIPK4P57078 832 aa21.85■■□□□ 1.09
CLCF1-201ENST00000312438 HSP90AB2PQ58FF8 381 aa21.85■■□□□ 1.09
CLCF1-201ENST00000312438 NUTM2GQ5VZR2 741 aa21.85■■□□□ 1.09
CLCF1-201ENST00000312438 AMPHP49418 695 aa21.83■■□□□ 1.09
CLCF1-201ENST00000312438 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.09
CLCF1-201ENST00000312438 TRIM35Q9UPQ4 493 aa21.83■■□□□ 1.09
CLCF1-201ENST00000312438 SBNO1A3KN83 1393 aa21.83■■□□□ 1.09
CLCF1-201ENST00000312438 C1orf167Q5SNV9 1468 aa21.83■■□□□ 1.09
CLCF1-201ENST00000312438 CADPS2Q86UW7 1296 aa21.83■■□□□ 1.08
CLCF1-201ENST00000312438 DCCP43146 1447 aa21.82■■□□□ 1.08
CLCF1-201ENST00000312438 MYH16Q9H6N6 1097 aa21.82■■□□□ 1.08
CLCF1-201ENST00000312438 PIK3C2AO00443 1686 aa21.81■■□□□ 1.08
CLCF1-201ENST00000312438 FLT4P35916 1363 aa21.81■■□□□ 1.08
CLCF1-201ENST00000312438 KIF24Q5T7B8 1368 aa21.81■■□□□ 1.08
CLCF1-201ENST00000312438 PHACTR3Q96KR7 559 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms