RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ERLIN1O75477 346 aa16.31■□□□□ 0.2
CLCN6-201ENST00000312413 TCP11L2Q8N4U5 519 aa16.31■□□□□ 0.2
CLCN6-201ENST00000312413 MAGEC2Q9UBF1 373 aaPredicted RBP16.31■□□□□ 0.2
CLCN6-201ENST00000312413 WDR33Q9C0J8 1336 aaKnown RBP16.31■□□□□ 0.2
CLCN6-201ENST00000312413 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
CLCN6-201ENST00000312413 EIF3JO75822 258 aaKnown RBP16.3■□□□□ 0.2
CLCN6-201ENST00000312413 SERPINC1P01008 464 aa16.3■□□□□ 0.2
CLCN6-201ENST00000312413 BRPF1P55201 1214 aaPredicted RBP16.3■□□□□ 0.2
CLCN6-201ENST00000312413 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
CLCN6-201ENST00000312413 STAC3Q96MF2 364 aa16.3■□□□□ 0.2
CLCN6-201ENST00000312413 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
CLCN6-201ENST00000312413 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
CLCN6-201ENST00000312413 AEBP1Q8IUX7 1158 aa16.3■□□□□ 0.2
CLCN6-201ENST00000312413 GOLGA6L10A6NI86 522 aa16.29■□□□□ 0.2
CLCN6-201ENST00000312413 ATP2B1P20020 1258 aa16.29■□□□□ 0.2
CLCN6-201ENST00000312413 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
CLCN6-201ENST00000312413 EVA1CP58658 441 aa16.29■□□□□ 0.2
CLCN6-201ENST00000312413 PLCD4Q9BRC7 762 aa16.29■□□□□ 0.2
CLCN6-201ENST00000312413 ZNHIT6Q9NWK9 470 aaKnown RBP16.29■□□□□ 0.2
CLCN6-201ENST00000312413 MCM4P33991 863 aa16.29■□□□□ 0.2
CLCN6-201ENST00000312413 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
CLCN6-201ENST00000312413 MPNDQ8N594 471 aa16.29■□□□□ 0.2
CLCN6-201ENST00000312413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■■■ 236
CLCN6-201ENST00000312413 ERLIN2O94905 339 aa16.28■□□□□ 0.2
CLCN6-201ENST00000312413 TXLNAP40222 546 aa16.28■□□□□ 0.2
CLCN6-201ENST00000312413 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
CLCN6-201ENST00000312413 KRT85P78386 507 aa16.27■□□□□ 0.2
CLCN6-201ENST00000312413 GOLGA6L7A0A1B0GV03 622 aa16.27■□□□□ 0.2
CLCN6-201ENST00000312413 PPFIBP1Q86W92 1011 aa16.27■□□□□ 0.2
CLCN6-201ENST00000312413 GGNBP2Q9H3C7 697 aa16.27■□□□□ 0.2
CLCN6-201ENST00000312413 USP8P40818 1118 aa16.27■□□□□ 0.2
CLCN6-201ENST00000312413 AIMP1Q12904 312 aaKnown RBP16.27■□□□□ 0.19
CLCN6-201ENST00000312413 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
CLCN6-201ENST00000312413 CYP46A1Q9Y6A2 500 aa16.26■□□□□ 0.19
CLCN6-201ENST00000312413 MTHFSP49914 203 aa16.26■□□□□ 0.19
CLCN6-201ENST00000312413 FANCD2Q9BXW9 1451 aa16.26■□□□□ 0.19
CLCN6-201ENST00000312413 KDM4AO75164 1064 aa16.25■□□□□ 0.19
CLCN6-201ENST00000312413 DACH1Q9UI36 760 aa16.25■□□□□ 0.19
CLCN6-201ENST00000312413 WIZO95785 1651 aa16.25■□□□□ 0.19
CLCN6-201ENST00000312413 ZSCAN30Q86W11 494 aa16.25■□□□□ 0.19
CLCN6-201ENST00000312413 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
CLCN6-201ENST00000312413 ANKRD1Q15327 319 aa16.25■□□□□ 0.19
CLCN6-201ENST00000312413 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
CLCN6-201ENST00000312413 LUC7LQ9NQ29 371 aaKnown RBP16.25■□□□□ 0.19
CLCN6-201ENST00000312413 PDCL2Q8N4E4 241 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 TAF3Q5VWG9 929 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 FYB1O15117 783 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 CBFA2T2O43439 604 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 ME1P48163 572 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 CCDC181Q5TID7 509 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 AKNAQ7Z591 1439 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 DNAJC2Q99543 621 aaKnown RBP16.24■□□□□ 0.19
CLCN6-201ENST00000312413 C1orf115Q9H7X2 142 aa16.24■□□□□ 0.19
CLCN6-201ENST00000312413 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
CLCN6-201ENST00000312413 GNAI2P04899 355 aa16.23■□□□□ 0.19
CLCN6-201ENST00000312413 CDK5RAP3Q96JB5 506 aa16.23■□□□□ 0.19
CLCN6-201ENST00000312413 NEFHP12036 1026 aa16.23■□□□□ 0.19
CLCN6-201ENST00000312413 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-201ENST00000312413 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
CLCN6-201ENST00000312413 ZRSR2Q15696 482 aaKnown RBP16.22■□□□□ 0.19
CLCN6-201ENST00000312413 CCAR1Q8IX12 1150 aaKnown RBP16.22■□□□□ 0.19
CLCN6-201ENST00000312413 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-201ENST00000312413 BCAR3O75815 825 aa16.22■□□□□ 0.19
CLCN6-201ENST00000312413 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
CLCN6-201ENST00000312413 TXLNBQ8N3L3 684 aa16.22■□□□□ 0.19
CLCN6-201ENST00000312413 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
CLCN6-201ENST00000312413 DEF6Q9H4E7 631 aa16.22■□□□□ 0.19
CLCN6-201ENST00000312413 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
CLCN6-201ENST00000312413 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
CLCN6-201ENST00000312413 CEP57L1Q8IYX8 460 aa16.21■□□□□ 0.19
CLCN6-201ENST00000312413 SYCP1Q15431 976 aa16.21■□□□□ 0.19
CLCN6-201ENST00000312413 PSME1Q06323 249 aa16.2■□□□□ 0.18
CLCN6-201ENST00000312413 NUP62CLQ9H1M0 184 aa16.2■□□□□ 0.18
CLCN6-201ENST00000312413 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
CLCN6-201ENST00000312413 MTMR7Q9Y216 660 aa16.2■□□□□ 0.18
CLCN6-201ENST00000312413 ERICH4A6NGS2 130 aa16.2■□□□□ 0.18
CLCN6-201ENST00000312413 UBXN4Q92575 508 aa16.2■□□□□ 0.18
CLCN6-201ENST00000312413 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
CLCN6-201ENST00000312413 STIM1Q13586 685 aa16.2■□□□□ 0.18
CLCN6-201ENST00000312413 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
CLCN6-201ENST00000312413 IQCEQ6IPM2 695 aa16.19■□□□□ 0.18
CLCN6-201ENST00000312413 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
CLCN6-201ENST00000312413 SPATA32Q96LK8 384 aa16.19■□□□□ 0.18
CLCN6-201ENST00000312413 STK3Q13188 491 aa16.19■□□□□ 0.18
CLCN6-201ENST00000312413 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
CLCN6-201ENST00000312413 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
CLCN6-201ENST00000312413 LRRCC1Q9C099 1032 aa16.18■□□□□ 0.18
CLCN6-201ENST00000312413 FGD6Q6ZV73 1430 aa16.18■□□□□ 0.18
CLCN6-201ENST00000312413 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
CLCN6-201ENST00000312413 MSH5O43196 834 aa16.17■□□□□ 0.18
CLCN6-201ENST00000312413 CENPHQ9H3R5 247 aa16.17■□□□□ 0.18
CLCN6-201ENST00000312413 CFAP45Q9UL16 551 aa16.17■□□□□ 0.18
CLCN6-201ENST00000312413 SMG6Q86US8 1419 aaKnown RBP16.17■□□□□ 0.18
CLCN6-201ENST00000312413 KRT18P05783 430 aaKnown RBP16.17■□□□□ 0.18
CLCN6-201ENST00000312413 SEPT7Q16181 437 aaKnown RBP16.17■□□□□ 0.18
CLCN6-201ENST00000312413 CHD1LQ86WJ1 897 aa16.17■□□□□ 0.18
CLCN6-201ENST00000312413 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms