RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
NPAS4-201ENST00000311034 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
NPAS4-201ENST00000311034 DTNBO60941 627 aa16.88■□□□□ 0.29
NPAS4-201ENST00000311034 SSFA2P28290 1259 aa16.88■□□□□ 0.29
NPAS4-201ENST00000311034 TRPM2O94759 1503 aa16.88■□□□□ 0.29
NPAS4-201ENST00000311034 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
NPAS4-201ENST00000311034 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
NPAS4-201ENST00000311034 VIRMAQ69YN4 1812 aaKnown RBP16.87■□□□□ 0.29
NPAS4-201ENST00000311034 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
NPAS4-201ENST00000311034 MIS18AQ9NYP9 233 aa16.86■□□□□ 0.29
NPAS4-201ENST00000311034 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
NPAS4-201ENST00000311034 WAPLQ7Z5K2 1190 aa16.86■□□□□ 0.29
NPAS4-201ENST00000311034 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
NPAS4-201ENST00000311034 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
NPAS4-201ENST00000311034 PRAM1Q96QH2 718 aa16.85■□□□□ 0.29
NPAS4-201ENST00000311034 CEP152O94986 1710 aa16.85■□□□□ 0.29
NPAS4-201ENST00000311034 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
NPAS4-201ENST00000311034 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
NPAS4-201ENST00000311034 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
NPAS4-201ENST00000311034 PRKAR2BP31323 418 aa16.85■□□□□ 0.29
NPAS4-201ENST00000311034 RRS1Q15050 365 aaKnown RBP16.85■□□□□ 0.29
NPAS4-201ENST00000311034 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
NPAS4-201ENST00000311034 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
NPAS4-201ENST00000311034 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
NPAS4-201ENST00000311034 ZBTB40Q9NUA8 1239 aa16.84■□□□□ 0.29
NPAS4-201ENST00000311034 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
NPAS4-201ENST00000311034 ABCC1P33527 1531 aa16.83■□□□□ 0.29
NPAS4-201ENST00000311034 NUCB1Q02818 461 aa16.83■□□□□ 0.29
NPAS4-201ENST00000311034 FAM83GA6ND36 823 aa16.83■□□□□ 0.28
NPAS4-201ENST00000311034 NASPP49321 788 aaPredicted RBP16.83■□□□□ 0.28
NPAS4-201ENST00000311034 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
NPAS4-201ENST00000311034 MCTP1Q6DN14 999 aa16.83■□□□□ 0.28
NPAS4-201ENST00000311034 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
NPAS4-201ENST00000311034 NCKAP5LQ9HCH0 1330 aa16.83■□□□□ 0.28
NPAS4-201ENST00000311034 PKNOX2Q96KN3 472 aa16.83■□□□□ 0.28
NPAS4-201ENST00000311034 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
NPAS4-201ENST00000311034 ZRANB1Q9UGI0 708 aa16.83■□□□□ 0.28
NPAS4-201ENST00000311034 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
NPAS4-201ENST00000311034 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
NPAS4-201ENST00000311034 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
NPAS4-201ENST00000311034 K7ELQ4 463 aaPredicted RBP16.81■□□□□ 0.28
NPAS4-201ENST00000311034 DIAPH1O60610 1272 aaKnown RBP16.81■□□□□ 0.28
NPAS4-201ENST00000311034 MSNP26038 577 aaKnown RBP16.81■□□□□ 0.28
NPAS4-201ENST00000311034 FBXO31Q5XUX0 539 aaPredicted RBP16.81■□□□□ 0.28
NPAS4-201ENST00000311034 ZNF518AQ6AHZ1 1483 aa16.81■□□□□ 0.28
NPAS4-201ENST00000311034 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
NPAS4-201ENST00000311034 CAVIN1Q6NZI2 390 aaKnown RBP16.8■□□□□ 0.28
NPAS4-201ENST00000311034 ABCA6Q8N139 1617 aa16.8■□□□□ 0.28
NPAS4-201ENST00000311034 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
NPAS4-201ENST00000311034 RAB3GAP1Q15042 981 aa16.8■□□□□ 0.28
NPAS4-201ENST00000311034 KRT24Q2M2I5 525 aa16.8■□□□□ 0.28
NPAS4-201ENST00000311034 ZMYND15Q9H091 742 aa16.8■□□□□ 0.28
NPAS4-201ENST00000311034 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
NPAS4-201ENST00000311034 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
NPAS4-201ENST00000311034 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
NPAS4-201ENST00000311034 ATAD2Q6PL18 1390 aa16.79■□□□□ 0.28
NPAS4-201ENST00000311034 RBM25P49756 843 aaKnown RBP16.79■□□□□ 0.28
NPAS4-201ENST00000311034 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
NPAS4-201ENST00000311034 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
NPAS4-201ENST00000311034 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
NPAS4-201ENST00000311034 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
NPAS4-201ENST00000311034 ZFYVE16Q7Z3T8 1539 aa16.77■□□□□ 0.28
NPAS4-201ENST00000311034 CHD1O14646 1710 aa16.77■□□□□ 0.28
NPAS4-201ENST00000311034 SMARCA5O60264 1052 aaPredicted RBP16.77■□□□□ 0.28
NPAS4-201ENST00000311034 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.28
NPAS4-201ENST00000311034 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.28
NPAS4-201ENST00000311034 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
NPAS4-201ENST00000311034 FANCAO15360 1455 aa16.77■□□□□ 0.27
NPAS4-201ENST00000311034 TSPYL6Q8N831 410 aa16.77■□□□□ 0.27
NPAS4-201ENST00000311034 RRP9O43818 475 aaKnown RBP16.76■□□□□ 0.27
NPAS4-201ENST00000311034 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
NPAS4-201ENST00000311034 HDGFL2Q7Z4V5 671 aaPredicted RBP16.76■□□□□ 0.27
NPAS4-201ENST00000311034 SNX21Q969T3 373 aa16.76■□□□□ 0.27
NPAS4-201ENST00000311034 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
NPAS4-201ENST00000311034 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
NPAS4-201ENST00000311034 MAP3K4Q9Y6R4 1608 aa16.76■□□□□ 0.27
NPAS4-201ENST00000311034 CD109Q6YHK3 1445 aa16.75■□□□□ 0.27
NPAS4-201ENST00000311034 PLEKHF1Q96S99 279 aa16.75■□□□□ 0.27
NPAS4-201ENST00000311034 CIZ1Q9ULV3 898 aaPredicted RBP16.75■□□□□ 0.27
NPAS4-201ENST00000311034 ZMYM3Q14202 1370 aa16.75■□□□□ 0.27
NPAS4-201ENST00000311034 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
NPAS4-201ENST00000311034 TXNDC2Q86VQ3 553 aa16.75■□□□□ 0.27
NPAS4-201ENST00000311034 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
NPAS4-201ENST00000311034 BAG4O95429 457 aaKnown RBP16.74■□□□□ 0.27
NPAS4-201ENST00000311034 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
NPAS4-201ENST00000311034 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.74■□□□□ 0.27
NPAS4-201ENST00000311034 KIF2CQ99661 725 aa16.74■□□□□ 0.27
NPAS4-201ENST00000311034 TERF2IPQ9NYB0 399 aa16.74■□□□□ 0.27
NPAS4-201ENST00000311034 R3HCC1Q9Y3T6 440 aaKnown RBP16.74■□□□□ 0.27
NPAS4-201ENST00000311034 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
NPAS4-201ENST00000311034 CDC45O75419 566 aa16.73■□□□□ 0.27
NPAS4-201ENST00000311034 IDI1Q13907 227 aa16.73■□□□□ 0.27
NPAS4-201ENST00000311034 ATP7AQ04656 1500 aa16.73■□□□□ 0.27
NPAS4-201ENST00000311034 FYB1O15117 783 aa16.73■□□□□ 0.27
NPAS4-201ENST00000311034 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
NPAS4-201ENST00000311034 RBM27Q9P2N5 1060 aaKnown RBP16.73■□□□□ 0.27
NPAS4-201ENST00000311034 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
NPAS4-201ENST00000311034 ANKRD36BQ8N2N9 1353 aa16.73■□□□□ 0.27
NPAS4-201ENST00000311034 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
NPAS4-201ENST00000311034 PKP1Q13835 747 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms