RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 RARSP54136 660 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-201ENST00000308177 INTS3Q68E01 1043 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-201ENST00000308177 AMOTL2Q9Y2J4 779 aa14.04□□□□□ -0.16
PCDHGC3-201ENST00000308177 HSP90AB4PQ58FF6 505 aa14.03□□□□□ -0.16
PCDHGC3-201ENST00000308177 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-201ENST00000308177 GCC1Q96CN9 775 aa14.03□□□□□ -0.16
PCDHGC3-201ENST00000308177 NKTRP30414 1462 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-201ENST00000308177 GOLGA6L3A6NEY3 463 aa14.03□□□□□ -0.16
PCDHGC3-201ENST00000308177 AIMP1Q12904 312 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-201ENST00000308177 G3BP1Q13283 466 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHGC3-201ENST00000308177 DDX11L8A8MPP1 907 aa14.02□□□□□ -0.16
PCDHGC3-201ENST00000308177 RUFY2Q8WXA3 655 aa14.02□□□□□ -0.16
PCDHGC3-201ENST00000308177 ABCC11Q96J66 1382 aa14.02□□□□□ -0.17
PCDHGC3-201ENST00000308177 HDGFL1Q5TGJ6 251 aa14.02□□□□□ -0.17
PCDHGC3-201ENST00000308177 RIC3Q7Z5B4 369 aa14.02□□□□□ -0.17
PCDHGC3-201ENST00000308177 CDC45O75419 566 aa14.02□□□□□ -0.17
PCDHGC3-201ENST00000308177 SYAP1Q96A49 352 aaPredicted RBP14.02□□□□□ -0.17
PCDHGC3-201ENST00000308177 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
PCDHGC3-201ENST00000308177 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
PCDHGC3-201ENST00000308177 HSP90B1P14625 803 aaKnown RBP14.01□□□□□ -0.17
PCDHGC3-201ENST00000308177 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
PCDHGC3-201ENST00000308177 PER1O15534 1290 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-201ENST00000308177 ZNF530Q6P9A1 599 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-201ENST00000308177 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
PCDHGC3-201ENST00000308177 GTF2E1P29083 439 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-201ENST00000308177 GNL2Q13823 731 aaKnown RBP14□□□□□ -0.17
PCDHGC3-201ENST00000308177 CHMP5Q9NZZ3 219 aa14□□□□□ -0.17
PCDHGC3-201ENST00000308177 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-201ENST00000308177 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-201ENST00000308177 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
PCDHGC3-201ENST00000308177 GCC2Q8IWJ2 1684 aa13.99□□□□□ -0.17
PCDHGC3-201ENST00000308177 TMEM57Q8N5G2 664 aa13.99□□□□□ -0.17
PCDHGC3-201ENST00000308177 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
PCDHGC3-201ENST00000308177 ANKRD36BQ8N2N9 1353 aa13.99□□□□□ -0.17
PCDHGC3-201ENST00000308177 TNRQ92752 1358 aa13.99□□□□□ -0.17
PCDHGC3-201ENST00000308177 GNAI2P04899 355 aa13.99□□□□□ -0.17
PCDHGC3-201ENST00000308177 CCT4P50991 539 aaKnown RBP13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 NAP1L5Q96NT1 182 aaPredicted RBP13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 SURF6O75683 361 aaKnown RBP13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 ABCA8O94911 1581 aa13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 FYB1O15117 783 aa13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 IFT57Q9NWB7 429 aa13.98□□□□□ -0.17
PCDHGC3-201ENST00000308177 MBD5Q9P267 1494 aa13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 GSE1Q14687 1217 aa13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 LRPPRCP42704 1394 aaKnown RBP13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 ERC2O15083 957 aa13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 MSNP26038 577 aaKnown RBP13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 MCM10Q7L590 875 aa13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 ATP7AQ04656 1500 aa13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 PUS7Q96PZ0 661 aaKnown RBP13.97□□□□□ -0.17
PCDHGC3-201ENST00000308177 GOLGA6L6A8MZA4 724 aa13.96□□□□□ -0.17
PCDHGC3-201ENST00000308177 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
PCDHGC3-201ENST00000308177 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
PCDHGC3-201ENST00000308177 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.17
PCDHGC3-201ENST00000308177 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.18
PCDHGC3-201ENST00000308177 CARD14Q9BXL6 1004 aa13.96□□□□□ -0.18
PCDHGC3-201ENST00000308177 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
PCDHGC3-201ENST00000308177 COL17A1Q9UMD9 1497 aaPredicted RBP13.95□□□□□ -0.18
PCDHGC3-201ENST00000308177 CLASRPQ8N2M8 674 aaKnown RBP13.95□□□□□ -0.18
PCDHGC3-201ENST00000308177 PHF8Q9UPP1 1060 aa13.95□□□□□ -0.18
PCDHGC3-201ENST00000308177 ARHGEF5Q12774 1597 aa13.95□□□□□ -0.18
PCDHGC3-201ENST00000308177 GNAT3A8MTJ3 354 aa13.95□□□□□ -0.18
PCDHGC3-201ENST00000308177 GLIPR1L2Q4G1C9 344 aa13.95□□□□□ -0.18
PCDHGC3-201ENST00000308177 CHD1LQ86WJ1 897 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 MIS18AQ9NYP9 233 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 FBLN1P23142 703 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 NRDCO43847 1150 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 LRRFIP1Q32MZ4 808 aaKnown RBP13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 SRCIN1Q9C0H9 1055 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 ACEP12821 1306 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
PCDHGC3-201ENST00000308177 NFKBIBQ15653 356 aa13.93□□□□□ -0.18
PCDHGC3-201ENST00000308177 SKOR2Q2VWA4 1001 aaPredicted RBP13.93□□□□□ -0.18
PCDHGC3-201ENST00000308177 FRAT2O75474 233 aaPredicted RBP13.93□□□□□ -0.18
PCDHGC3-201ENST00000308177 SKAP1Q86WV1 359 aa13.93□□□□□ -0.18
PCDHGC3-201ENST00000308177 POLR3AO14802 1390 aaPredicted RBP13.93□□□□□ -0.18
PCDHGC3-201ENST00000308177 ZC3H6P61129 1189 aaKnown RBP13.93□□□□□ -0.18
PCDHGC3-201ENST00000308177 RBM33Q96EV2 1170 aaKnown RBP13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 TOMM22Q9NS69 142 aa13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 ATP6V1DQ9Y5K8 247 aa13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 FOXD4L6Q3SYB3 417 aaPredicted RBP13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 FOXD4L3Q6VB84 417 aaPredicted RBP13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 RPAP2Q8IXW5 612 aaPredicted RBP13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 DRC7Q8IY82 874 aa13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 KDM6BO15054 1643 aa13.92□□□□□ -0.18
PCDHGC3-201ENST00000308177 RNF20Q5VTR2 975 aa13.91□□□□□ -0.18
PCDHGC3-201ENST00000308177 FOXO3O43524 673 aa13.91□□□□□ -0.18
PCDHGC3-201ENST00000308177 TRIM27P14373 513 aa13.91□□□□□ -0.18
PCDHGC3-201ENST00000308177 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
PCDHGC3-201ENST00000308177 STRN4Q9NRL3 753 aa13.91□□□□□ -0.18
PCDHGC3-201ENST00000308177 PIK3C2GO75747 1445 aa13.9□□□□□ -0.18
PCDHGC3-201ENST00000308177 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms