RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 NPHP3Q7Z494 1330 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 A0A0G2JS52 829 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 TOM1O60784 492 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 DIP2AQ14689 1571 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 CCDC146Q8IYE0 955 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 CARD14Q9BXL6 1004 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 ASXL1Q8IXJ9 1541 aa9.76□□□□□ -0.85
CDC40-201ENST00000307731 PTPRUQ92729 1446 aa9.75□□□□□ -0.85
CDC40-201ENST00000307731 NSD2O96028 1365 aa9.75□□□□□ -0.85
CDC40-201ENST00000307731 DLC1Q96QB1 1528 aa9.75□□□□□ -0.85
CDC40-201ENST00000307731 RRS1Q15050 365 aaKnown RBP9.75□□□□□ -0.85
CDC40-201ENST00000307731 PTCH1Q13635 1447 aa9.75□□□□□ -0.85
CDC40-201ENST00000307731 TTC21AQ8NDW8 1320 aa9.74□□□□□ -0.85
CDC40-201ENST00000307731 FYB1O15117 783 aa9.74□□□□□ -0.85
CDC40-201ENST00000307731 MYT1Q01538 1121 aa9.74□□□□□ -0.85
CDC40-201ENST00000307731 PRR36Q9H6K5 1346 aa9.74□□□□□ -0.85
CDC40-201ENST00000307731 ADGRL3Q9HAR2 1447 aa9.74□□□□□ -0.85
CDC40-201ENST00000307731 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
CDC40-201ENST00000307731 CCDC9Q9Y3X0 531 aaKnown RBP9.74□□□□□ -0.85
CDC40-201ENST00000307731 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
CDC40-201ENST00000307731 SLAIN2Q9P270 581 aa9.73□□□□□ -0.85
CDC40-201ENST00000307731 CANXP27824 592 aaKnown RBP9.73□□□□□ -0.85
CDC40-201ENST00000307731 ZC3H6P61129 1189 aaKnown RBP9.73□□□□□ -0.85
CDC40-201ENST00000307731 CCDC184Q52MB2 194 aa9.73□□□□□ -0.85
CDC40-201ENST00000307731 KCNH5Q8NCM2 988 aa9.73□□□□□ -0.85
CDC40-201ENST00000307731 ZRANB1Q9UGI0 708 aa9.73□□□□□ -0.85
CDC40-201ENST00000307731 TECPR2O15040 1411 aa9.73□□□□□ -0.85
CDC40-201ENST00000307731 EVA1CP58658 441 aa9.72□□□□□ -0.85
CDC40-201ENST00000307731 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
CDC40-201ENST00000307731 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
CDC40-201ENST00000307731 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
CDC40-201ENST00000307731 PRDM11Q9NQV5 511 aa9.72□□□□□ -0.85
CDC40-201ENST00000307731 TULP4Q9NRJ4 1543 aa9.72□□□□□ -0.85
CDC40-201ENST00000307731 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.85
CDC40-201ENST00000307731 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.85
CDC40-201ENST00000307731 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.85
CDC40-201ENST00000307731 EMILIN1Q9Y6C2 1016 aa9.71□□□□□ -0.85
CDC40-201ENST00000307731 HMOX1P09601 288 aa9.71□□□□□ -0.86
CDC40-201ENST00000307731 DDX17Q92841 729 aaKnown RBP9.71□□□□□ -0.86
CDC40-201ENST00000307731 FBLN1P23142 703 aa9.7□□□□□ -0.86
CDC40-201ENST00000307731 RTF1Q92541 710 aaKnown RBP9.7□□□□□ -0.86
CDC40-201ENST00000307731 NLRP2Q9NX02 1062 aa9.7□□□□□ -0.86
CDC40-201ENST00000307731 RRP7AQ9Y3A4 280 aaKnown RBP9.7□□□□□ -0.86
CDC40-201ENST00000307731 ATP7BP35670 1465 aa9.7□□□□□ -0.86
CDC40-201ENST00000307731 ZNF142P52746 1687 aaPredicted RBP9.7□□□□□ -0.86
CDC40-201ENST00000307731 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
CDC40-201ENST00000307731 ADAMTS8Q9UP79 889 aa9.7□□□□□ -0.86
CDC40-201ENST00000307731 PARD3Q8TEW0 1356 aa9.69□□□□□ -0.86
CDC40-201ENST00000307731 ANKARQ7Z5J8 1434 aa9.69□□□□□ -0.86
CDC40-201ENST00000307731 NKTRP30414 1462 aaKnown RBP9.69□□□□□ -0.86
CDC40-201ENST00000307731 CPS1P31327 1500 aa9.69□□□□□ -0.86
CDC40-201ENST00000307731 APAF1O14727 1248 aa9.69□□□□□ -0.86
CDC40-201ENST00000307731 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
CDC40-201ENST00000307731 MED14O60244 1454 aa9.68□□□□□ -0.86
CDC40-201ENST00000307731 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
CDC40-201ENST00000307731 PNISRQ8TF01 805 aaKnown RBP9.68□□□□□ -0.86
CDC40-201ENST00000307731 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
CDC40-201ENST00000307731 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
CDC40-201ENST00000307731 POLR1AO95602 1720 aaPredicted RBP9.67□□□□□ -0.86
CDC40-201ENST00000307731 CABLES1Q8TDN4 633 aa9.67□□□□□ -0.86
CDC40-201ENST00000307731 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
CDC40-201ENST00000307731 USP6P35125 1406 aa9.67□□□□□ -0.86
CDC40-201ENST00000307731 RAPGEF4Q8WZA2 1011 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 SULT6B1Q6IMI4 303 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 TAOK2Q9UL54 1235 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 NRXN3Q9Y4C0 1643 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 LMOD3Q0VAK6 560 aa9.66□□□□□ -0.86
CDC40-201ENST00000307731 LRRC59Q96AG4 307 aaKnown RBP9.66□□□□□ -0.86
CDC40-201ENST00000307731 CHRNA2Q15822 529 aa9.65□□□□□ -0.86
CDC40-201ENST00000307731 POLKQ9UBT6 870 aa9.65□□□□□ -0.86
CDC40-201ENST00000307731 GCP02774 474 aa9.65□□□□□ -0.87
CDC40-201ENST00000307731 CALD1Q05682 793 aaKnown RBP9.65□□□□□ -0.87
CDC40-201ENST00000307731 TOM1L2Q6ZVM7 507 aa9.65□□□□□ -0.87
CDC40-201ENST00000307731 BRINP3Q76B58 766 aa9.65□□□□□ -0.87
CDC40-201ENST00000307731 C1orf167Q5SNV9 1468 aa9.64□□□□□ -0.87
CDC40-201ENST00000307731 RIPK4P57078 832 aa9.64□□□□□ -0.87
CDC40-201ENST00000307731 GOLGA2Q08379 1002 aa9.64□□□□□ -0.87
CDC40-201ENST00000307731 HSP90AB2PQ58FF8 381 aa9.64□□□□□ -0.87
CDC40-201ENST00000307731 C1orf141Q5JVX7 400 aa9.64□□□□□ -0.87
CDC40-201ENST00000307731 TCP11L2Q8N4U5 519 aa9.64□□□□□ -0.87
CDC40-201ENST00000307731 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
CDC40-201ENST00000307731 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.63□□□□□ -0.87
CDC40-201ENST00000307731 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
CDC40-201ENST00000307731 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
CDC40-201ENST00000307731 ZBED9Q6R2W3 1325 aa9.62□□□□□ -0.87
CDC40-201ENST00000307731 FLT4P35916 1363 aa9.62□□□□□ -0.87
CDC40-201ENST00000307731 USHBP1Q8N6Y0 703 aa9.62□□□□□ -0.87
CDC40-201ENST00000307731 KNDC1Q76NI1 1749 aa9.62□□□□□ -0.87
CDC40-201ENST00000307731 NCOA3Q9Y6Q9 1424 aa9.62□□□□□ -0.87
CDC40-201ENST00000307731 MYH16Q9H6N6 1097 aa9.61□□□□□ -0.87
CDC40-201ENST00000307731 POLR3AO14802 1390 aaPredicted RBP9.61□□□□□ -0.87
CDC40-201ENST00000307731 CDC42BPGQ6DT37 1551 aa9.61□□□□□ -0.87
CDC40-201ENST00000307731 FCHSD2O94868 740 aa9.61□□□□□ -0.87
CDC40-201ENST00000307731 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
CDC40-201ENST00000307731 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
CDC40-201ENST00000307731 NGEFQ8N5V2 710 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms