RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 HOOK1Q9UJC3 728 aaKnown RBP19.29■□□□□ 0.68
USP42-201ENST00000306177 AKNAQ7Z591 1439 aa19.28■□□□□ 0.68
USP42-201ENST00000306177 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
USP42-201ENST00000306177 GCC1Q96CN9 775 aa19.28■□□□□ 0.68
USP42-201ENST00000306177 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
USP42-201ENST00000306177 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
USP42-201ENST00000306177 RAD21O60216 631 aa19.28■□□□□ 0.68
USP42-201ENST00000306177 CT47B1P0C2W7 299 aaPredicted RBP19.28■□□□□ 0.68
USP42-201ENST00000306177 WDR63Q8IWG1 891 aa19.28■□□□□ 0.68
USP42-201ENST00000306177 CCDC47Q96A33 483 aaKnown RBP19.28■□□□□ 0.68
USP42-201ENST00000306177 CCDC184Q52MB2 194 aa19.27■□□□□ 0.68
USP42-201ENST00000306177 PDZRN3Q9UPQ7 1066 aa19.27■□□□□ 0.68
USP42-201ENST00000306177 POGZQ7Z3K3 1410 aa19.27■□□□□ 0.68
USP42-201ENST00000306177 NOB1Q9ULX3 412 aaKnown RBP19.27■□□□□ 0.67
USP42-201ENST00000306177 ADGRL1O94910 1474 aa19.27■□□□□ 0.67
USP42-201ENST00000306177 DHX16O60231 1041 aaKnown RBP19.26■□□□□ 0.67
USP42-201ENST00000306177 PSMA5P28066 241 aa19.26■□□□□ 0.67
USP42-201ENST00000306177 FSD1Q9BTV5 496 aa19.26■□□□□ 0.67
USP42-201ENST00000306177 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.26■□□□□ 0.67
USP42-201ENST00000306177 A0A0U1RQG5 324 aaPredicted RBP19.25■□□□□ 0.67
USP42-201ENST00000306177 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
USP42-201ENST00000306177 SAFBQ15424 915 aaKnown RBP eCLIP19.25■□□□□ 0.67
USP42-201ENST00000306177 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
USP42-201ENST00000306177 BCAR3O75815 825 aa19.25■□□□□ 0.67
USP42-201ENST00000306177 GNAI2P04899 355 aa19.25■□□□□ 0.67
USP42-201ENST00000306177 ANKRD20A12PQ8NF67 263 aa19.25■□□□□ 0.67
USP42-201ENST00000306177 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
USP42-201ENST00000306177 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.23■□□□□ 0.67
USP42-201ENST00000306177 CCDC73Q6ZRK6 1079 aa19.23■□□□□ 0.67
USP42-201ENST00000306177 FBXW7Q969H0 707 aa19.23■□□□□ 0.67
USP42-201ENST00000306177 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
USP42-201ENST00000306177 NSD3Q9BZ95 1437 aa19.23■□□□□ 0.67
USP42-201ENST00000306177 TATP17735 454 aaPredicted RBP19.22■□□□□ 0.67
USP42-201ENST00000306177 SASS6Q6UVJ0 657 aa19.22■□□□□ 0.67
USP42-201ENST00000306177 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
USP42-201ENST00000306177 HDGFL1Q5TGJ6 251 aa19.22■□□□□ 0.67
USP42-201ENST00000306177 C1orf115Q9H7X2 142 aa19.22■□□□□ 0.67
USP42-201ENST00000306177 CTDP1Q9Y5B0 961 aaPredicted RBP19.22■□□□□ 0.67
USP42-201ENST00000306177 PDE4CQ08493 712 aa19.22■□□□□ 0.67
USP42-201ENST00000306177 TCEAL9Q9UHQ7 104 aa19.22■□□□□ 0.67
USP42-201ENST00000306177 HIP1O00291 1037 aa19.21■□□□□ 0.67
USP42-201ENST00000306177 CCT4P50991 539 aaKnown RBP19.21■□□□□ 0.67
USP42-201ENST00000306177 NFKBIBQ15653 356 aa19.21■□□□□ 0.67
USP42-201ENST00000306177 RSPH6AQ9H0K4 717 aa19.21■□□□□ 0.66
USP42-201ENST00000306177 RRS1Q15050 365 aaKnown RBP19.2■□□□□ 0.66
USP42-201ENST00000306177 CCDC61Q9Y6R9 512 aa19.2■□□□□ 0.66
USP42-201ENST00000306177 IPO7O95373 1038 aaKnown RBP19.2■□□□□ 0.66
USP42-201ENST00000306177 KIF6Q6ZMV9 814 aa19.2■□□□□ 0.66
USP42-201ENST00000306177 WWC1Q8IX03 1113 aa19.19■□□□□ 0.66
USP42-201ENST00000306177 FOSBP53539 338 aa19.19■□□□□ 0.66
USP42-201ENST00000306177 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
USP42-201ENST00000306177 CCAR2Q8N163 923 aaKnown RBP19.19■□□□□ 0.66
USP42-201ENST00000306177 MCM2P49736 904 aa19.19■□□□□ 0.66
USP42-201ENST00000306177 NUDT16Q96DE0 195 aaKnown RBP19.19■□□□□ 0.66
USP42-201ENST00000306177 PCMTD1Q96MG8 357 aaPredicted RBP19.19■□□□□ 0.66
USP42-201ENST00000306177 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
USP42-201ENST00000306177 CCDC27Q2M243 656 aa19.19■□□□□ 0.66
USP42-201ENST00000306177 ZNF530Q6P9A1 599 aaPredicted RBP19.19■□□□□ 0.66
USP42-201ENST00000306177 RABEP1Q15276 862 aa19.18■□□□□ 0.66
USP42-201ENST00000306177 STRN4Q9NRL3 753 aa19.18■□□□□ 0.66
USP42-201ENST00000306177 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
USP42-201ENST00000306177 DNAJC2Q99543 621 aaKnown RBP19.17■□□□□ 0.66
USP42-201ENST00000306177 FCHSD2O94868 740 aa19.17■□□□□ 0.66
USP42-201ENST00000306177 NEK4P51957 841 aa19.17■□□□□ 0.66
USP42-201ENST00000306177 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
USP42-201ENST00000306177 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
USP42-201ENST00000306177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.16■□□□□ 0.66
USP42-201ENST00000306177 CCDC70Q6NSX1 233 aa19.16■□□□□ 0.66
USP42-201ENST00000306177 ZNF592Q92610 1267 aa19.16■□□□□ 0.66
USP42-201ENST00000306177 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
USP42-201ENST00000306177 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
USP42-201ENST00000306177 WAPLQ7Z5K2 1190 aa19.15■□□□□ 0.66
USP42-201ENST00000306177 BRMS1Q9HCU9 246 aa19.15■□□□□ 0.66
USP42-201ENST00000306177 FYB1O15117 783 aa19.15■□□□□ 0.66
USP42-201ENST00000306177 XBP1P17861 261 aa19.15■□□□□ 0.66
USP42-201ENST00000306177 ADGRF5Q8IZF2 1346 aa19.14■□□□□ 0.65
USP42-201ENST00000306177 SART3Q15020 963 aaKnown RBP19.14■□□□□ 0.65
USP42-201ENST00000306177 LRRCC1Q9C099 1032 aa19.14■□□□□ 0.65
USP42-201ENST00000306177 ZNF428Q96B54 188 aa19.14■□□□□ 0.65
USP42-201ENST00000306177 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
USP42-201ENST00000306177 CABP4P57796 275 aa19.13■□□□□ 0.65
USP42-201ENST00000306177 HSP90AA2PQ14568 343 aaPredicted RBP19.13■□□□□ 0.65
USP42-201ENST00000306177 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
USP42-201ENST00000306177 RPRD2Q5VT52 1461 aaKnown RBP19.12■□□□□ 0.65
USP42-201ENST00000306177 PDCP20941 246 aa19.12■□□□□ 0.65
USP42-201ENST00000306177 TOM1L2Q6ZVM7 507 aa19.12■□□□□ 0.65
USP42-201ENST00000306177 HOMER1Q86YM7 354 aa19.12■□□□□ 0.65
USP42-201ENST00000306177 FANCAO15360 1455 aa19.12■□□□□ 0.65
USP42-201ENST00000306177 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
USP42-201ENST00000306177 MRE11P49959 708 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 NFE2L2Q16236 605 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 CCDC158Q5M9N0 1113 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 NAT10Q9H0A0 1025 aaKnown RBP19.11■□□□□ 0.65
USP42-201ENST00000306177 FAM135AQ9P2D6 1515 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 MBD3O95983 291 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 GPS2Q13227 327 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 IDI1Q13907 227 aa19.11■□□□□ 0.65
USP42-201ENST00000306177 FBXO31Q5XUX0 539 aaPredicted RBP19.1■□□□□ 0.65
USP42-201ENST00000306177 SLFN5Q08AF3 891 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms