RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
TRIM35-201ENST00000305364 NUCB1Q02818 461 aa15.96■□□□□ 0.15
TRIM35-201ENST00000305364 CABP2Q9NPB3 220 aa15.95■□□□□ 0.14
TRIM35-201ENST00000305364 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
TRIM35-201ENST00000305364 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
TRIM35-201ENST00000305364 DISP1Q96F81 1524 aa15.95■□□□□ 0.14
TRIM35-201ENST00000305364 POLR3AO14802 1390 aaPredicted RBP15.94■□□□□ 0.14
TRIM35-201ENST00000305364 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
TRIM35-201ENST00000305364 TRIM6-TRIM34B2RNG4 842 aa15.94■□□□□ 0.14
TRIM35-201ENST00000305364 C14orf37Q86TY3 774 aa15.94■□□□□ 0.14
TRIM35-201ENST00000305364 TERF2IPQ9NYB0 399 aa15.94■□□□□ 0.14
TRIM35-201ENST00000305364 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
TRIM35-201ENST00000305364 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
TRIM35-201ENST00000305364 SHANK2Q9UPX8 1470 aa15.93■□□□□ 0.14
TRIM35-201ENST00000305364 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
TRIM35-201ENST00000305364 NEK4P51957 841 aa15.93■□□□□ 0.14
TRIM35-201ENST00000305364 WDR7Q9Y4E6 1490 aa15.93■□□□□ 0.14
TRIM35-201ENST00000305364 MBD3O95983 291 aa15.93■□□□□ 0.14
TRIM35-201ENST00000305364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
TRIM35-201ENST00000305364 DRC7Q8IY82 874 aa15.93■□□□□ 0.14
TRIM35-201ENST00000305364 CWC22Q9HCG8 908 aaKnown RBP15.93■□□□□ 0.14
TRIM35-201ENST00000305364 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
TRIM35-201ENST00000305364 ADGRF5Q8IZF2 1346 aa15.92■□□□□ 0.14
TRIM35-201ENST00000305364 HMOX1P09601 288 aa15.92■□□□□ 0.14
TRIM35-201ENST00000305364 SASS6Q6UVJ0 657 aa15.92■□□□□ 0.14
TRIM35-201ENST00000305364 TSPY26PQ9H489 355 aa15.92■□□□□ 0.14
TRIM35-201ENST00000305364 EIF2AK4Q9P2K8 1649 aaKnown RBP15.92■□□□□ 0.14
TRIM35-201ENST00000305364 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
TRIM35-201ENST00000305364 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
TRIM35-201ENST00000305364 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
TRIM35-201ENST00000305364 KDM5DQ9BY66 1539 aa15.91■□□□□ 0.14
TRIM35-201ENST00000305364 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
TRIM35-201ENST00000305364 API5Q9BZZ5 524 aaKnown RBP15.91■□□□□ 0.14
TRIM35-201ENST00000305364 ZBTB40Q9NUA8 1239 aa15.9■□□□□ 0.14
TRIM35-201ENST00000305364 RBSNQ9H1K0 784 aa15.9■□□□□ 0.14
TRIM35-201ENST00000305364 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
TRIM35-201ENST00000305364 CCDC27Q2M243 656 aa15.9■□□□□ 0.14
TRIM35-201ENST00000305364 RILPL2Q969X0 211 aa15.9■□□□□ 0.14
TRIM35-201ENST00000305364 ZKSCAN5Q9Y2L8 839 aa15.9■□□□□ 0.14
TRIM35-201ENST00000305364 DYNC1I1O14576 645 aa15.89■□□□□ 0.13
TRIM35-201ENST00000305364 CDK11BP21127 795 aaKnown RBP15.89■□□□□ 0.13
TRIM35-201ENST00000305364 ATP10BO94823 1461 aa15.89■□□□□ 0.13
TRIM35-201ENST00000305364 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
TRIM35-201ENST00000305364 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
TRIM35-201ENST00000305364 ZMYM3Q14202 1370 aa15.89■□□□□ 0.13
TRIM35-201ENST00000305364 HMMRO75330 724 aa15.88■□□□□ 0.13
TRIM35-201ENST00000305364 ANO2Q9NQ90 1003 aa15.88■□□□□ 0.13
TRIM35-201ENST00000305364 CD2BP2O95400 341 aaKnown RBP15.88■□□□□ 0.13
TRIM35-201ENST00000305364 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
TRIM35-201ENST00000305364 HMGN5P82970 282 aaKnown RBP15.88■□□□□ 0.13
TRIM35-201ENST00000305364 CBX1P83916 185 aa15.88■□□□□ 0.13
TRIM35-201ENST00000305364 NOL7Q9UMY1 257 aaKnown RBP15.87■□□□□ 0.13
TRIM35-201ENST00000305364 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
TRIM35-201ENST00000305364 MINK1Q8N4C8 1332 aaPredicted RBP15.87■□□□□ 0.13
TRIM35-201ENST00000305364 ABCC2Q92887 1545 aa15.87■□□□□ 0.13
TRIM35-201ENST00000305364 GNAI1P63096 354 aa15.86■□□□□ 0.13
TRIM35-201ENST00000305364 GOLGA6L4A6NEF3 574 aa15.86■□□□□ 0.13
TRIM35-201ENST00000305364 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
TRIM35-201ENST00000305364 PRDM15P57071 1507 aaPredicted RBP15.86■□□□□ 0.13
TRIM35-201ENST00000305364 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
TRIM35-201ENST00000305364 HS1BP3Q53T59 392 aa15.86■□□□□ 0.13
TRIM35-201ENST00000305364 TRPM1Q7Z4N2 1603 aa15.86■□□□□ 0.13
TRIM35-201ENST00000305364 HAP1P54257 671 aaPredicted RBP15.86■□□□□ 0.13
TRIM35-201ENST00000305364 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
TRIM35-201ENST00000305364 TWISTNBQ3B726 338 aaPredicted RBP15.85■□□□□ 0.13
TRIM35-201ENST00000305364 ZNF771Q7L3S4 317 aaPredicted RBP15.85■□□□□ 0.13
TRIM35-201ENST00000305364 GOLGA6L6A8MZA4 724 aa15.84■□□□□ 0.13
TRIM35-201ENST00000305364 MCM5P33992 734 aa15.84■□□□□ 0.13
TRIM35-201ENST00000305364 LRSAM1Q6UWE0 723 aa15.84■□□□□ 0.13
TRIM35-201ENST00000305364 ZGPATQ8N5A5 531 aaKnown RBP15.84■□□□□ 0.13
TRIM35-201ENST00000305364 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
TRIM35-201ENST00000305364 PLA2R1Q13018 1463 aa15.83■□□□□ 0.13
TRIM35-201ENST00000305364 ZNF445P59923 1031 aa15.83■□□□□ 0.12
TRIM35-201ENST00000305364 ZNF830Q96NB3 372 aaPredicted RBP15.83■□□□□ 0.12
TRIM35-201ENST00000305364 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.12
TRIM35-201ENST00000305364 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
TRIM35-201ENST00000305364 GDPD2Q9HCC8 539 aa15.83■□□□□ 0.12
TRIM35-201ENST00000305364 CHMP3Q9Y3E7 222 aa15.83■□□□□ 0.12
TRIM35-201ENST00000305364 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
TRIM35-201ENST00000305364 ERC2O15083 957 aa15.82■□□□□ 0.12
TRIM35-201ENST00000305364 SMARCA5O60264 1052 aaPredicted RBP15.82■□□□□ 0.12
TRIM35-201ENST00000305364 LMOD3Q0VAK6 560 aa15.82■□□□□ 0.12
TRIM35-201ENST00000305364 KIF3AQ9Y496 699 aa15.82■□□□□ 0.12
TRIM35-201ENST00000305364 TERF1P54274 439 aa15.82■□□□□ 0.12
TRIM35-201ENST00000305364 USP25Q9UHP3 1055 aa15.82■□□□□ 0.12
TRIM35-201ENST00000305364 SOX12O15370 315 aa15.81■□□□□ 0.12
TRIM35-201ENST00000305364 DIAPH3Q9NSV4 1193 aa15.81■□□□□ 0.12
TRIM35-201ENST00000305364 LMBRD1Q9NUN5 540 aa15.81■□□□□ 0.12
TRIM35-201ENST00000305364 E9PCH4 1651 aa15.81■□□□□ 0.12
TRIM35-201ENST00000305364 ABCC11Q96J66 1382 aa15.8■□□□□ 0.12
TRIM35-201ENST00000305364 KCNJ4P48050 445 aa15.8■□□□□ 0.12
TRIM35-201ENST00000305364 PKP1Q13835 747 aa15.8■□□□□ 0.12
TRIM35-201ENST00000305364 SPC24Q8NBT2 197 aa15.8■□□□□ 0.12
TRIM35-201ENST00000305364 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
TRIM35-201ENST00000305364 C16orf71Q8IYS4 520 aaPredicted RBP15.79■□□□□ 0.12
TRIM35-201ENST00000305364 VGFO15240 615 aaPredicted RBP15.79■□□□□ 0.12
TRIM35-201ENST00000305364 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRIM35-201ENST00000305364 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
TRIM35-201ENST00000305364 CHAMP1Q96JM3 812 aa15.79■□□□□ 0.12
TRIM35-201ENST00000305364 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms