RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.26■■■■□ 3.56
HDAC3-201ENST00000305264 TTC21BQ7Z4L5 1316 aa37.26■■■■□ 3.56
HDAC3-201ENST00000305264 PHLPP1O60346 1717 aa37.26■■■■□ 3.55
HDAC3-201ENST00000305264 KIF20BQ96Q89 1820 aa37.25■■■■□ 3.55
HDAC3-201ENST00000305264 KNSTRNQ9Y448 316 aa37.25■■■■□ 3.55
HDAC3-201ENST00000305264 SOS2Q07890 1332 aaPredicted RBP37.25■■■■□ 3.55
HDAC3-201ENST00000305264 PIK3C2AO00443 1686 aa37.23■■■■□ 3.55
HDAC3-201ENST00000305264 BRD4O60885 1362 aaPredicted RBP37.23■■■■□ 3.55
HDAC3-201ENST00000305264 PAK3O75914 559 aaPredicted RBP37.22■■■■□ 3.55
HDAC3-201ENST00000305264 ALS2Q96Q42 1657 aa37.22■■■■□ 3.55
HDAC3-201ENST00000305264 COL16A1Q07092 1604 aaPredicted RBP37.21■■■■□ 3.55
HDAC3-201ENST00000305264 SBNO1A3KN83 1393 aa37.2■■■■□ 3.55
HDAC3-201ENST00000305264 CGNL1Q0VF96 1302 aa37.19■■■■□ 3.54
HDAC3-201ENST00000305264 TTC21AQ8NDW8 1320 aa37.19■■■■□ 3.54
HDAC3-201ENST00000305264 AMER1Q5JTC6 1135 aaPredicted RBP37.18■■■■□ 3.54
HDAC3-201ENST00000305264 NME9Q86XW9 330 aa37.18■■■■□ 3.54
HDAC3-201ENST00000305264 TNS3Q68CZ2 1445 aa37.18■■■■□ 3.54
HDAC3-201ENST00000305264 FYB1O15117 783 aa37.15■■■■□ 3.54
HDAC3-201ENST00000305264 SPATA31A3Q5VYP0 1347 aa37.14■■■■□ 3.54
HDAC3-201ENST00000305264 ZRANB1Q9UGI0 708 aa37.13■■■■□ 3.53
HDAC3-201ENST00000305264 ANKRD26Q9UPS8 1709 aa37.13■■■■□ 3.53
HDAC3-201ENST00000305264 MARF1Q9Y4F3 1742 aaKnown RBP37.13■■■■□ 3.53
HDAC3-201ENST00000305264 CNGB1Q14028 1251 aaPredicted RBP37.13■■■■□ 3.53
HDAC3-201ENST00000305264 ABTB2Q8N961 1025 aa37.12■■■■□ 3.53
HDAC3-201ENST00000305264 GGNBP2Q9H3C7 697 aa37.12■■■■□ 3.53
HDAC3-201ENST00000305264 NUTM2GQ5VZR2 741 aa37.11■■■■□ 3.53
HDAC3-201ENST00000305264 LMOD2Q6P5Q4 547 aa37.11■■■■□ 3.53
HDAC3-201ENST00000305264 USP54Q70EL1 1684 aa37.1■■■■□ 3.53
HDAC3-201ENST00000305264 CC2D1BQ5T0F9 858 aaKnown RBP37.1■■■■□ 3.53
HDAC3-201ENST00000305264 NPC1L1Q9UHC9 1359 aa37.1■■■■□ 3.53
HDAC3-201ENST00000305264 NSD2O96028 1365 aa37.08■■■■□ 3.53
HDAC3-201ENST00000305264 OVOS2A0A0J9YW53 1432 aa37.08■■■■□ 3.53
HDAC3-201ENST00000305264 OVOS2Q6IE36 1432 aa37.08■■■■□ 3.53
HDAC3-201ENST00000305264 DIEXFQ68CQ4 756 aaKnown RBP37.06■■■■□ 3.52
HDAC3-201ENST00000305264 ARHGEF10O15013 1369 aa37.05■■■■□ 3.52
HDAC3-201ENST00000305264 USP31Q70CQ4 1352 aa37.05■■■■□ 3.52
HDAC3-201ENST00000305264 LRRC59Q96AG4 307 aaKnown RBP37.05■■■■□ 3.52
HDAC3-201ENST00000305264 NLRP6P59044 892 aa37.04■■■■□ 3.52
HDAC3-201ENST00000305264 HSPA1LP34931 641 aa37.03■■■■□ 3.52
HDAC3-201ENST00000305264 CRYBG1Q9Y4K1 1723 aa37.02■■■■□ 3.52
HDAC3-201ENST00000305264 MED1Q15648 1581 aaPredicted RBP37.02■■■■□ 3.52
HDAC3-201ENST00000305264 COG3Q96JB2 828 aa37.01■■■■□ 3.52
HDAC3-201ENST00000305264 PLEKHG5O94827 1062 aa36.99■■■■□ 3.51
HDAC3-201ENST00000305264 PNPLA6Q8IY17 1366 aa36.99■■■■□ 3.51
HDAC3-201ENST00000305264 FBXO41Q8TF61 875 aa36.98■■■■□ 3.51
HDAC3-201ENST00000305264 PHRF1Q9P1Y6 1649 aaKnown RBP36.98■■■■□ 3.51
HDAC3-201ENST00000305264 NLRP13Q86W25 1043 aa36.98■■■■□ 3.51
HDAC3-201ENST00000305264 COL22A1Q8NFW1 1626 aaPredicted RBP36.98■■■■□ 3.51
HDAC3-201ENST00000305264 ABCA3Q99758 1704 aa36.98■■■■□ 3.51
HDAC3-201ENST00000305264 USP19O94966 1318 aa36.96■■■■□ 3.51
HDAC3-201ENST00000305264 SLIT3O75094 1523 aa36.96■■■■□ 3.51
HDAC3-201ENST00000305264 MORC1Q86VD1 984 aa36.96■■■■□ 3.51
HDAC3-201ENST00000305264 SHPRHQ149N8 1683 aa36.95■■■■□ 3.51
HDAC3-201ENST00000305264 PARD3Q8TEW0 1356 aa36.95■■■■□ 3.51
HDAC3-201ENST00000305264 CABLES1Q8TDN4 633 aa36.93■■■■□ 3.5
HDAC3-201ENST00000305264 TNNT2P45379 298 aaPredicted RBP36.92■■■■□ 3.5
HDAC3-201ENST00000305264 PRKRIP1Q9H875 184 aaPredicted RBP36.91■■■■□ 3.5
HDAC3-201ENST00000305264 SOX12O15370 315 aa36.9■■■■□ 3.5
HDAC3-201ENST00000305264 NFAT5O94916 1531 aa36.9■■■■□ 3.5
HDAC3-201ENST00000305264 JCADQ9P266 1359 aa36.89■■■■□ 3.5
HDAC3-201ENST00000305264 ANP32CO43423 234 aa36.88■■■■□ 3.49
HDAC3-201ENST00000305264 FBLN1P23142 703 aa36.88■■■■□ 3.49
HDAC3-201ENST00000305264 RALBP1Q15311 655 aa36.85■■■■□ 3.49
HDAC3-201ENST00000305264 GCP02774 474 aa36.84■■■■□ 3.49
HDAC3-201ENST00000305264 MAP2P11137 1827 aaKnown RBP36.83■■■■□ 3.49
HDAC3-201ENST00000305264 KCNH5Q8NCM2 988 aa36.82■■■■□ 3.48
HDAC3-201ENST00000305264 LTN1O94822 1766 aa36.81■■■■□ 3.48
HDAC3-201ENST00000305264 AATKQ6ZMQ8 1374 aa36.81■■■■□ 3.48
HDAC3-201ENST00000305264 RRS1Q15050 365 aaKnown RBP36.78■■■■□ 3.48
HDAC3-201ENST00000305264 PPP2R1AP30153 589 aa36.77■■■■□ 3.48
HDAC3-201ENST00000305264 HAP1P54257 671 aaPredicted RBP36.77■■■■□ 3.48
HDAC3-201ENST00000305264 PEAK1Q9H792 1746 aa36.75■■■■□ 3.47
HDAC3-201ENST00000305264 MYBBP1AQ9BQG0 1328 aaKnown RBP36.75■■■■□ 3.47
HDAC3-201ENST00000305264 ZC3H6P61129 1189 aaKnown RBP36.75■■■■□ 3.47
HDAC3-201ENST00000305264 EMILIN1Q9Y6C2 1016 aa36.74■■■■□ 3.47
HDAC3-201ENST00000305264 MAP3K19Q56UN5 1328 aa36.74■■■■□ 3.47
HDAC3-201ENST00000305264 POLKQ9UBT6 870 aa36.73■■■■□ 3.47
HDAC3-201ENST00000305264 SMG6Q86US8 1419 aaKnown RBP36.72■■■■□ 3.47
HDAC3-201ENST00000305264 KIAA0232Q92628 1395 aa36.72■■■■□ 3.47
HDAC3-201ENST00000305264 NUTM2BA6NNL0 878 aaPredicted RBP36.71■■■■□ 3.47
HDAC3-201ENST00000305264 NUTM2EB1AL46 878 aaPredicted RBP36.71■■■■□ 3.47
HDAC3-201ENST00000305264 NUTM2AQ8IVF1 878 aaPredicted RBP36.71■■■■□ 3.47
HDAC3-201ENST00000305264 CPDO75976 1380 aa36.7■■■■□ 3.47
HDAC3-201ENST00000305264 SPATA31A6Q5VVP1 1343 aa36.7■■■■□ 3.47
HDAC3-201ENST00000305264 ARHGEF25Q86VW2 580 aa36.7■■■■□ 3.47
HDAC3-201ENST00000305264 ZBTB7CA1YPR0 619 aa36.69■■■■□ 3.46
HDAC3-201ENST00000305264 LRP6O75581 1613 aa36.69■■■■□ 3.46
HDAC3-201ENST00000305264 MIER1Q8N108 512 aa36.69■■■■□ 3.46
HDAC3-201ENST00000305264 MTHFSP49914 203 aa36.67■■■■□ 3.46
HDAC3-201ENST00000305264 PPM1GO15355 546 aaPredicted RBP36.67■■■■□ 3.46
HDAC3-201ENST00000305264 COL18A1P39060 1754 aa36.65■■■■□ 3.46
HDAC3-201ENST00000305264 CDK12Q9NYV4 1490 aaPredicted RBP36.65■■■■□ 3.46
HDAC3-201ENST00000305264 ADAMTS2O95450 1211 aa36.64■■■■□ 3.46
HDAC3-201ENST00000305264 CHRNA2Q15822 529 aa36.64■■■■□ 3.46
HDAC3-201ENST00000305264 PRDM11Q9NQV5 511 aa36.64■■■■□ 3.46
HDAC3-201ENST00000305264 RTL1A6NKG5 1358 aa36.62■■■■□ 3.45
HDAC3-201ENST00000305264 AMPHP49418 695 aa36.62■■■■□ 3.45
HDAC3-201ENST00000305264 RGPD5Q99666 1765 aa36.62■■■■□ 3.45
HDAC3-201ENST00000305264 FLT4P35916 1363 aa36.62■■■■□ 3.45
HDAC3-201ENST00000305264 LMO7Q8WWI1 1683 aa36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms