RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 COL3A1P02461 1466 aaPredicted RBP11.87□□□□□ -0.51
LDB2-201ENST00000304523 TULP4Q9NRJ4 1543 aa11.87□□□□□ -0.51
LDB2-201ENST00000304523 U2AF1L5P0DN76 240 aaPredicted RBP11.87□□□□□ -0.51
LDB2-201ENST00000304523 U2AF1Q01081 240 aaKnown RBP eCLIP11.87□□□□□ -0.51
LDB2-201ENST00000304523 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
LDB2-201ENST00000304523 ESPNB1AK53 854 aa11.87□□□□□ -0.51
LDB2-201ENST00000304523 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
LDB2-201ENST00000304523 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
LDB2-201ENST00000304523 PLEKHF1Q96S99 279 aa11.87□□□□□ -0.51
LDB2-201ENST00000304523 TRAK1Q9UPV9 953 aa11.87□□□□□ -0.51
LDB2-201ENST00000304523 GLI2P10070 1586 aa11.86□□□□□ -0.51
LDB2-201ENST00000304523 NUCB1Q02818 461 aa11.86□□□□□ -0.51
LDB2-201ENST00000304523 RAB3GAP1Q15042 981 aa11.86□□□□□ -0.51
LDB2-201ENST00000304523 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
LDB2-201ENST00000304523 ANKRD26Q9UPS8 1709 aa11.86□□□□□ -0.51
LDB2-201ENST00000304523 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
LDB2-201ENST00000304523 RRP9O43818 475 aaKnown RBP11.86□□□□□ -0.51
LDB2-201ENST00000304523 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
LDB2-201ENST00000304523 PTMSP20962 102 aa11.85□□□□□ -0.51
LDB2-201ENST00000304523 SKOR2Q2VWA4 1001 aaPredicted RBP11.85□□□□□ -0.51
LDB2-201ENST00000304523 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
LDB2-201ENST00000304523 GBP4Q96PP9 640 aa11.85□□□□□ -0.51
LDB2-201ENST00000304523 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
LDB2-201ENST00000304523 ERBB4Q15303 1308 aa11.85□□□□□ -0.51
LDB2-201ENST00000304523 MED14O60244 1454 aa11.85□□□□□ -0.51
LDB2-201ENST00000304523 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
LDB2-201ENST00000304523 KIF16BQ96L93 1317 aa11.85□□□□□ -0.51
LDB2-201ENST00000304523 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
LDB2-201ENST00000304523 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
LDB2-201ENST00000304523 BMP2KLQ5H9B9 411 aa11.84□□□□□ -0.51
LDB2-201ENST00000304523 KIF2CQ99661 725 aa11.84□□□□□ -0.51
LDB2-201ENST00000304523 NOB1Q9ULX3 412 aaKnown RBP11.84□□□□□ -0.51
LDB2-201ENST00000304523 REREQ9P2R6 1566 aa11.83□□□□□ -0.52
LDB2-201ENST00000304523 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
LDB2-201ENST00000304523 RPGRIP1LQ68CZ1 1315 aa11.83□□□□□ -0.52
LDB2-201ENST00000304523 EVC2Q86UK5 1308 aa11.83□□□□□ -0.52
LDB2-201ENST00000304523 IPO8O15397 1037 aaKnown RBP11.82□□□□□ -0.52
LDB2-201ENST00000304523 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
LDB2-201ENST00000304523 CHD1LQ86WJ1 897 aa11.82□□□□□ -0.52
LDB2-201ENST00000304523 ARHGAP31Q2M1Z3 1444 aa11.82□□□□□ -0.52
LDB2-201ENST00000304523 IBTKQ9P2D0 1353 aaPredicted RBP11.82□□□□□ -0.52
LDB2-201ENST00000304523 HSP90AA2PQ14568 343 aaPredicted RBP11.82□□□□□ -0.52
LDB2-201ENST00000304523 ALDH1L2Q3SY69 923 aa11.82□□□□□ -0.52
LDB2-201ENST00000304523 NPATQ14207 1427 aa11.81□□□□□ -0.52
LDB2-201ENST00000304523 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
LDB2-201ENST00000304523 HSP90AB1P08238 724 aaKnown RBP11.81□□□□□ -0.52
LDB2-201ENST00000304523 TRIM44Q96DX7 344 aaPredicted RBP11.81□□□□□ -0.52
LDB2-201ENST00000304523 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
LDB2-201ENST00000304523 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
LDB2-201ENST00000304523 CDC42BPGQ6DT37 1551 aa11.8□□□□□ -0.52
LDB2-201ENST00000304523 PPIP5K1Q6PFW1 1433 aa11.8□□□□□ -0.52
LDB2-201ENST00000304523 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
LDB2-201ENST00000304523 TMEM132EQ6IEE7 984 aa11.8□□□□□ -0.52
LDB2-201ENST00000304523 CAMSAP1Q5T5Y3 1602 aa11.79□□□□□ -0.52
LDB2-201ENST00000304523 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
LDB2-201ENST00000304523 K7ELQ4 463 aaPredicted RBP11.79□□□□□ -0.52
LDB2-201ENST00000304523 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
LDB2-201ENST00000304523 PPP1R9BQ96SB3 815 aa11.79□□□□□ -0.52
LDB2-201ENST00000304523 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
LDB2-201ENST00000304523 PIK3R4Q99570 1358 aa11.79□□□□□ -0.52
LDB2-201ENST00000304523 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
LDB2-201ENST00000304523 GCC1Q96CN9 775 aa11.79□□□□□ -0.52
LDB2-201ENST00000304523 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
LDB2-201ENST00000304523 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
LDB2-201ENST00000304523 NEXMIFQ5QGS0 1516 aa11.78□□□□□ -0.52
LDB2-201ENST00000304523 TPM2P07951 284 aa11.78□□□□□ -0.52
LDB2-201ENST00000304523 CLTCQ00610 1675 aaKnown RBP11.77□□□□□ -0.52
LDB2-201ENST00000304523 U2SURPO15042 1029 aaKnown RBP11.77□□□□□ -0.53
LDB2-201ENST00000304523 PTCH1Q13635 1447 aa11.77□□□□□ -0.53
LDB2-201ENST00000304523 RIPK4P57078 832 aa11.77□□□□□ -0.53
LDB2-201ENST00000304523 KLHL40Q2TBA0 621 aa11.77□□□□□ -0.53
LDB2-201ENST00000304523 FRMPD1Q5SYB0 1578 aa11.76□□□□□ -0.53
LDB2-201ENST00000304523 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
LDB2-201ENST00000304523 ZBTB7BO15156 539 aaPredicted RBP11.76□□□□□ -0.53
LDB2-201ENST00000304523 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
LDB2-201ENST00000304523 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
LDB2-201ENST00000304523 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
LDB2-201ENST00000304523 SIGLEC1Q9BZZ2 1709 aa11.76□□□□□ -0.53
LDB2-201ENST00000304523 ARHGAP45Q92619 1136 aa11.76□□□□□ -0.53
LDB2-201ENST00000304523 KIF20BQ96Q89 1820 aa11.75□□□□□ -0.53
LDB2-201ENST00000304523 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
LDB2-201ENST00000304523 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
LDB2-201ENST00000304523 CD163L1Q9NR16 1453 aa11.75□□□□□ -0.53
LDB2-201ENST00000304523 AK9Q5TCS8 1911 aa11.75□□□□□ -0.53
LDB2-201ENST00000304523 ABCC3O15438 1527 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 ZFYVE9O95405 1425 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 SSFA2P28290 1259 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 NASPP49321 788 aaPredicted RBP11.74□□□□□ -0.53
LDB2-201ENST00000304523 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 GAS2L2Q8NHY3 880 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 FAM135BQ49AJ0 1406 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 ANKRD45Q5TZF3 282 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 PKNOX2Q96KN3 472 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 GGNBP2Q9H3C7 697 aa11.74□□□□□ -0.53
LDB2-201ENST00000304523 FYB1O15117 783 aa11.73□□□□□ -0.53
LDB2-201ENST00000304523 BAG4O95429 457 aaKnown RBP11.73□□□□□ -0.53
LDB2-201ENST00000304523 ZNF445P59923 1031 aa11.73□□□□□ -0.53
LDB2-201ENST00000304523 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
LDB2-201ENST00000304523 CDC45O75419 566 aa11.73□□□□□ -0.53
LDB2-201ENST00000304523 FCHSD2O94868 740 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms